PGSC0003DMG400045423 (Solanum tuberosum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 PGSC0003DMG400045423 T255734_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400095852 MADS box 1 20

Links

Other MADS box family TFs
Other Solanum tuberosum TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400040625 Solanum tuberosum PGSC0003DMG400040625 N 0.800
evm.TU.contig_27313 Carica papaya evm.TU.contig_27313 N 0.800
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.750
Solyc04g025050.1 Solanum lycopersicum Solyc04g025050.1 N 0.750
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.750
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.750
evm.TU.contig_28241.1 Carica papaya evm.TU.contig_28241.1 N 0.750
evm.TU.contig_35157.1 Carica papaya evm.TU.contig_35157.1 N 0.750
evm.TU.supercontig_347.11 Carica papaya evm.TU.supercontig_347.11 N 0.750
evm.TU.supercontig_348.3 Carica papaya evm.TU.supercontig_348.3 N 0.750
evm.TU.supercontig_654.4 Carica papaya evm.TU.supercontig_654.4 N 0.750
AGL62 Arabidopsis thaliana AT5G60440 I 0.700
Bra002480 Brassica rapa Bra002480 N 0.700
F775_23542 Aegilops tauschii F775_23542 N 0.700
PGSC0003DMG400036006 Solanum tuberosum PGSC0003DMG400036006 N 0.700
TCM_006323 Theobroma cacao TCM_006323 N 0.700
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.700
Cla006571 Citrullus lanatus Cla006571 N 0.700
Cla019897 Citrullus lanatus Cla019897 N 0.700
Pm030654 Prunus mume Pm030654 N 0.700
30099.m001672 Ricinus communis 30099.m001672 N 0.700
cassava21387.m1 Manihot esculenta cassava21387.m1 N 0.700
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.700
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.700
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.700
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.700
evm.TU.contig_33091.2 Carica papaya evm.TU.contig_33091.2 N 0.700
evm.TU.contig_35697 Carica papaya evm.TU.contig_35697 N 0.700
evm.TU.contig_35713 Carica papaya evm.TU.contig_35713 N 0.700
evm.TU.contig_35751 Carica papaya evm.TU.contig_35751 N 0.700
evm.TU.contig_37271 Carica papaya evm.TU.contig_37271 N 0.700
evm.TU.supercontig_1259.1 Carica papaya evm.TU.supercontig_1259.1 N 0.700
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.700
evm.TU.supercontig_347.7 Carica papaya evm.TU.supercontig_347.7 N 0.700
evm.TU.supercontig_348.8 Carica papaya evm.TU.supercontig_348.8 N 0.700
evm.TU.supercontig_654.6 Carica papaya evm.TU.supercontig_654.6 N 0.700
gene30567-v1.0-hybrid Fragaria vesca gene30567-v1.0-hybrid I 0.700
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.700