CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.010G133300
(
Gossypium raimondii
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Gorai.010G133300
T258474_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.010G133300.1
MADS box
18
65
IIENADDRLIAFSKRRTGIYKKISELSTLCGGEILFIIFSPAGKPYSF
Links
Other
MADS box
family TFs
Other
Gossypium raimondii
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.010G132900
Gossypium raimondii
Gorai.010G132900
N
0.958
Gorai.010G133200
Gossypium raimondii
Gorai.010G133200
N
0.938
Gorai.010G132700
Gossypium raimondii
Gorai.010G132700
N
0.938
Gorai.010G133000
Gossypium raimondii
Gorai.010G133000
N
0.938
Gorai.010G133100
Gossypium raimondii
Gorai.010G133100
N
0.938
Gorai.006G132100
Gossypium raimondii
Gorai.006G132100
N
0.875
Gorai.010G132800
Gossypium raimondii
Gorai.010G132800
N
0.875
Gorai.010G132500
Gossypium raimondii
Gorai.010G132500
N
0.867
Gorai.009G284300
Gossypium raimondii
Gorai.009G284300
N
0.833
Gorai.010G132400
Gossypium raimondii
Gorai.010G132400
N
0.833
Gorai.010G132200
Gossypium raimondii
Gorai.010G132200
N
0.833
Gorai.011G158800
Gossypium raimondii
Gorai.011G158800
N
0.812
Gorai.009G157100
Gossypium raimondii
Gorai.009G157100
N
0.812
Gorai.N018000
Gossypium raimondii
Gorai.N018000
N
0.812
Gorai.012G147900
Gossypium raimondii
Gorai.012G147900
N
0.771
Gorai.011G158700
Gossypium raimondii
Gorai.011G158700
N
0.750
Gorai.012G148000
Gossypium raimondii
Gorai.012G148000
N
0.750
Ciclev10006559m.g
Citrus clementina
Ciclev10006559m.g
N
0.750
POPTR_0001s25850
Populus trichocarpa
POPTR_0001s25850
N
0.729
POPTR_0004s13590
Populus trichocarpa
POPTR_0004s13590
N
0.708
29693.m002041
Ricinus communis
29693.m002041
N
0.708
Ciclev10007090m.g
Citrus clementina
Ciclev10007090m.g
N
0.708
Cucsa.047600
Cucumis sativus
Cucsa.047600
N
0.708
cassava9834.m1
Manihot esculenta
cassava9834.m1
N
0.708
29693.m002042
Ricinus communis
29693.m002042
N
0.708
Cla009921
Citrullus lanatus
Cla009921
N
0.708