CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.E02872
(
Eucalyptus grandis
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
Eucgr.E02872
T257960_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.E02872.1
MADS box
16
63
QVENEEDKLITFSKRRSGIYKKASELVTLCGSEVGVAIFSPSGKPYSF
Links
Other
MADS box
family TFs
Other
Eucalyptus grandis
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Eucgr.L01236
Eucalyptus grandis
Eucgr.L01236
N
1.000
29693.m002042
Ricinus communis
29693.m002042
N
0.792
Cucsa.047600
Cucumis sativus
Cucsa.047600
N
0.771
Pm008734
Prunus mume
Pm008734
N
0.771
Cla009921
Citrullus lanatus
Cla009921
N
0.771
POPTR_0004s13590
Populus trichocarpa
POPTR_0004s13590
N
0.771
PRUPE_ppa024983mg
Prunus persica
PRUPE_ppa024983mg
N
0.771
Ciclev10007104m.g
Citrus clementina
Ciclev10007104m.g
N
0.750
cassava9834.m1
Manihot esculenta
cassava9834.m1
N
0.750
Ciclev10006587m.g
Citrus clementina
Ciclev10006587m.g
N
0.733
Ciclev10006958m.g
Citrus clementina
Ciclev10006958m.g
N
0.729
Ciclev10007010m.g
Citrus clementina
Ciclev10007010m.g
N
0.729
cassava9826.m1
Manihot esculenta
cassava9826.m1
N
0.729
Eucgr.E02870
Eucalyptus grandis
Eucgr.E02870
N
0.729
Eucgr.E02866
Eucalyptus grandis
Eucgr.E02866
N
0.729
Eucgr.E02827
Eucalyptus grandis
Eucgr.E02827
N
0.729
Eucgr.E02829
Eucalyptus grandis
Eucgr.E02829
N
0.729
Ciclev10006503m.g
Citrus clementina
Ciclev10006503m.g
N
0.729
Ciclev10006530m.g
Citrus clementina
Ciclev10006530m.g
N
0.729
orange1.1g044532m.g
Citrus sinensis
orange1.1g044532m.g
N
0.729
Eucgr.E02824
Eucalyptus grandis
Eucgr.E02824
N
0.729
PRUPE_ppa021886mg
Prunus persica
PRUPE_ppa021886mg
N
0.708
orange1.1g047467m.g
Citrus sinensis
orange1.1g047467m.g
N
0.708
MDP0000696333
Malus domestica
MDP0000696333
N
0.708
Ciclev10007015m.g
Citrus clementina
Ciclev10007015m.g
N
0.708
cassava39120.m1
Manihot esculenta
cassava39120.m1
N
0.708
POPTR_0001s25850
Populus trichocarpa
POPTR_0001s25850
N
0.708
Ciclev10006708m.g
Citrus clementina
Ciclev10006708m.g
N
0.708
Ciclev10006957m.g
Citrus clementina
Ciclev10006957m.g
N
0.708
29693.m002041
Ricinus communis
29693.m002041
N
0.708