PDK_20s1551551g001 (Phoenix dactylifera)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 PDK_20s1551551g001 T259451_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL91
M10922_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G66656_01 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1551551g001 MADS box 16 63

Links

Other MADS box family TFs
Other Phoenix dactylifera TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo4g157220 Brassica oleracea Bo4g157220 N 0.750
Bra032057 Brassica rapa Bra032057 N 0.729
MTR_1g047550 Medicago truncatula MTR_1g047550 I 0.729
MTR_8g079502 Medicago truncatula MTR_8g079502 I 0.729
gene14058-v1.0-hybrid Fragaria vesca gene14058-v1.0-hybrid I 0.729
Pavir.Ba03370 Panicum virgatum Pavir.Ba03370 N 0.729
Pavir.Bb00804 Panicum virgatum Pavir.Bb00804 N 0.729
Traes_4BL_9A17EA3B7 Triticum aestivum Traes_4BL_9A17EA3B7 I 0.724
Pavir.Fb00782 Panicum virgatum Pavir.Fb00782 I 0.724
AGL91 Arabidopsis thaliana AT3G66656 D 0.708
BGIOSGA029053 Oryza indica BGIOSGA029053 I 0.708
Bo4g182590 Brassica oleracea Bo4g182590 I 0.708
Bo8g099550 Brassica oleracea Bo8g099550 N 0.708
Bra007829 Brassica rapa Bra007829 N 0.708
Bra021910 Brassica rapa Bra021910 I 0.708
AGL91 Arabidopsis lyrata fgenesh2_kg.3__679__AT3G66656.1 I 0.708
GRMZM2G472100 Zea mays GRMZM2G472100 N 0.708
MTR_1g054265 Medicago truncatula MTR_1g054265 I 0.708
OBART08G21560 Oryza barthii OBART08G21560 I 0.708
OGLUM08G22840 Oryza glumaepatula OGLUM08G22840 I 0.708
OMERI06G13650 Oryza meridionalis OMERI06G13650 I 0.708
ONIVA08G24570 Oryza nivara ONIVA08G24570 I 0.708
ORGLA08G0229900 Oryza glaberrima ORGLA08G0229900 I 0.708
ORUFI08G24040 Oryza rufipogon ORUFI08G24040 I 0.708
OS08G0531900 Oryza sativa OS08G0531900 I 0.708
TCM_006325 Theobroma cacao TCM_006325 N 0.708
TCM_029518 Theobroma cacao TCM_029518 I 0.708
Ca_05023 Cicer arietinum Ca_05023 I 0.708
29693.m002042 Ricinus communis 29693.m002042 N 0.708
Aquca_040_00096 Aquilegia coerulea Aquca_040_00096 N 0.708
Cagra.0133s0015 Capsella grandiflora Cagra.0133s0015 I 0.708
Carubv10014761m.g Capsella rubella Carubv10014761m.g I 0.708
Gorai.010G165500 Gossypium raimondii Gorai.010G165500 I 0.708
Lus10031073.g Linum usitatissimum Lus10031073.g N 0.708
Pavir.Da00991 Panicum virgatum Pavir.Da00991 I 0.708
Thhalv10017825m.g Eutrema salsugineum Thhalv10017825m.g I 0.708
Thhalv10022154m.g Eutrema salsugineum Thhalv10022154m.g I 0.708