CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G472100
(
Zea mays
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
GRMZM2G472100
T254328_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G472100_P01
MADS box
10
57
PIENEEARQVCFSKRRQGLFKKASELSILCGATVGSVVFSTSGRSYSF
Links
Other
MADS box
family TFs
Other
Zea mays
TFs
58 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb02g006710
Sorghum bicolor
Sb02g006710
N
0.896
Sb02g006700
Sorghum bicolor
Sb02g006700
N
0.854
Pavir.Ba03370
Panicum virgatum
Pavir.Ba03370
N
0.854
Pavir.Bb00803
Panicum virgatum
Pavir.Bb00803
N
0.854
Pavir.Bb00804
Panicum virgatum
Pavir.Bb00804
N
0.854
Si032189m.g
Setaria italica
Si032189m.g
N
0.833
Sb02g006750
Sorghum bicolor
Sb02g006750
N
0.812
Pavir.Fb00782
Panicum virgatum
Pavir.Fb00782
I
0.793
GRMZM2G472096
Zea mays
GRMZM2G472096
N
0.792
Sb02g006730
Sorghum bicolor
Sb02g006730
N
0.771
OBART02G04930
Oryza barthii
OBART02G04930
N
0.759
AC234185.1_FG006
Zea mays
AC234185.1_FG006
I
0.750
BGIOSGA005284
Oryza indica
BGIOSGA005284
N
0.750
BGIOSGA030217
Oryza indica
BGIOSGA030217
N
0.750
GRMZM5G891280
Zea mays
GRMZM5G891280
I
0.750
LPERR01G40130
Leersia perrieri
LPERR01G40130
N
0.750
OBART01G45740
Oryza barthii
OBART01G45740
N
0.750
OBART09G00850
Oryza barthii
OBART09G00850
N
0.750
OGLUM01G50090
Oryza glumaepatula
OGLUM01G50090
N
0.750
OGLUM09G01140
Oryza glumaepatula
OGLUM09G01140
N
0.750
OLONG_018222
Oryza longistaminata
OLONG_018222
N
0.750
OLONG_027660
Oryza longistaminata
OLONG_027660
N
0.750
OMERI09G00900
Oryza meridionalis
OMERI09G00900
N
0.750
ONIVA01G52000
Oryza nivara
ONIVA01G52000
N
0.750
ONIVA09G00960
Oryza nivara
ONIVA09G00960
N
0.750
OPUNC01G44670
Oryza punctata
OPUNC01G44670
N
0.750
OPUNC09G00580
Oryza punctata
OPUNC09G00580
N
0.750
ORGLA01G0394900
Oryza glaberrima
ORGLA01G0394900
N
0.750
ORGLA09G0007400
Oryza glaberrima
ORGLA09G0007400
N
0.750
ORUFI01G49230
Oryza rufipogon
ORUFI01G49230
N
0.750
ORUFI09G00870
Oryza rufipogon
ORUFI09G00870
N
0.750
OS01G0975800
Oryza sativa
OS01G0975800
N
0.750
OS09G0116800
Oryza sativa
OS09G0116800
N
0.750
Sb09g029120
Sorghum bicolor
Sb09g029120
I
0.750
Si019951m.g
Setaria italica
Si019951m.g
I
0.750
Pavir.J00788
Panicum virgatum
Pavir.J00788
I
0.750
Pavir.J11717
Panicum virgatum
Pavir.J11717
I
0.750
F775_04223
Aegilops tauschii
F775_04223
I
0.729
GSMUA_Achr5G26530_001
Musa acuminata
GSMUA_Achr5G26530_001
I
0.729
LPERR02G10390
Leersia perrieri
LPERR02G10390
N
0.729
Si038960m.g
Setaria italica
Si038960m.g
N
0.729
TRAES3BF106100060CFD_g
Triticum aestivum
TRAES3BF106100060CFD_g
I
0.729
BGIOSGA007600
Oryza indica
BGIOSGA007600
N
0.708
F775_43210
Aegilops tauschii
F775_43210
I
0.708
LPERR08G12860
Leersia perrieri
LPERR08G12860
I
0.708
OB01G55160
Oryza brachyantha
OB01G55160
N
0.708
OGLUM02G04740
Oryza glumaepatula
OGLUM02G04740
N
0.708
ONIVA02G05120
Oryza nivara
ONIVA02G05120
N
0.708
ORGLA02G0045500
Oryza glaberrima
ORGLA02G0045500
N
0.708
ORUFI02G05030
Oryza rufipogon
ORUFI02G05030
N
0.708
SELMODRAFT_450772
Selaginella moellendorffii
SELMODRAFT_450772
N
0.708
SELMODRAFT_450775
Selaginella moellendorffii
SELMODRAFT_450775
N
0.708
SELMODRAFT_450776
Selaginella moellendorffii
SELMODRAFT_450776
N
0.708
SELMODRAFT_450777
Selaginella moellendorffii
SELMODRAFT_450777
N
0.708
Traes_6DL_609A01BD5
Triticum aestivum
Traes_6DL_609A01BD5
I
0.708
gw1.81.151.1
Physcomitrella patens
gw1.81.151.1
N
0.708
gw1.88.220.1
Physcomitrella patens
gw1.88.220.1
N
0.708
PDK_20s1551551g001
Phoenix dactylifera
PDK_20s1551551g001
I
0.708