CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb02g006710
(
Sorghum bicolor
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Sb02g006710
T256041_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb02g006710.1
MADS box
17
64
HIENEDARKVCFSKRRQGLFKKASELSILCGATVGSVVFSNSGRSFSF
Links
Other
MADS box
family TFs
Other
Sorghum bicolor
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G472100
Zea mays
GRMZM2G472100
N
0.896
Sb02g006700
Sorghum bicolor
Sb02g006700
N
0.833
Pavir.Ba03370
Panicum virgatum
Pavir.Ba03370
N
0.833
Pavir.Bb00803
Panicum virgatum
Pavir.Bb00803
N
0.833
Pavir.Bb00804
Panicum virgatum
Pavir.Bb00804
N
0.833
Si032189m.g
Setaria italica
Si032189m.g
N
0.812
Sb02g006750
Sorghum bicolor
Sb02g006750
N
0.792
AC234185.1_FG006
Zea mays
AC234185.1_FG006
I
0.729
GRMZM2G472096
Zea mays
GRMZM2G472096
N
0.729
GRMZM5G891280
Zea mays
GRMZM5G891280
I
0.729
Sb09g029120
Sorghum bicolor
Sb09g029120
I
0.729
Si019951m.g
Setaria italica
Si019951m.g
I
0.729
Si038960m.g
Setaria italica
Si038960m.g
N
0.729
Pavir.J00788
Panicum virgatum
Pavir.J00788
I
0.729
Pavir.J11717
Panicum virgatum
Pavir.J11717
I
0.729
Pavir.Fb00782
Panicum virgatum
Pavir.Fb00782
I
0.724
F775_04223
Aegilops tauschii
F775_04223
I
0.708
GSMUA_Achr5G26530_001
Musa acuminata
GSMUA_Achr5G26530_001
I
0.708
Sb02g006730
Sorghum bicolor
Sb02g006730
N
0.708
SELMODRAFT_450772
Selaginella moellendorffii
SELMODRAFT_450772
N
0.708
SELMODRAFT_450775
Selaginella moellendorffii
SELMODRAFT_450775
N
0.708
SELMODRAFT_450776
Selaginella moellendorffii
SELMODRAFT_450776
N
0.708
SELMODRAFT_450777
Selaginella moellendorffii
SELMODRAFT_450777
N
0.708
TRAES3BF106100060CFD_g
Triticum aestivum
TRAES3BF106100060CFD_g
I
0.708
gw1.81.151.1
Physcomitrella patens
gw1.81.151.1
N
0.708
gw1.88.220.1
Physcomitrella patens
gw1.88.220.1
N
0.708
Aquca_041_00050
Aquilegia coerulea
Aquca_041_00050
N
0.708