gw1.88.220.1 (Physcomitrella patens)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 gw1.88.220.1 T257375_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.88.220.1 MADS box 10 57

Links

Other MADS box family TFs
Other Physcomitrella patens TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gw1.81.151.1 Physcomitrella patens gw1.81.151.1 N 0.979
SELMODRAFT_450772 Selaginella moellendorffii SELMODRAFT_450772 N 0.938
SELMODRAFT_450775 Selaginella moellendorffii SELMODRAFT_450775 N 0.938
SELMODRAFT_450776 Selaginella moellendorffii SELMODRAFT_450776 N 0.938
SELMODRAFT_450777 Selaginella moellendorffii SELMODRAFT_450777 N 0.938
Pavir.Ba03370 Panicum virgatum Pavir.Ba03370 N 0.771
Pavir.Bb00804 Panicum virgatum Pavir.Bb00804 N 0.771
AC234185.1_FG006 Zea mays AC234185.1_FG006 I 0.750
AMTR_s00025p00244880 Amborella trichopoda AMTR_s00025p00244880 N 0.750
F775_04223 Aegilops tauschii F775_04223 I 0.750
GRMZM5G891280 Zea mays GRMZM5G891280 I 0.750
Sb09g029120 Sorghum bicolor Sb09g029120 I 0.750
Si019951m.g Setaria italica Si019951m.g I 0.750
Si032189m.g Setaria italica Si032189m.g N 0.750
TRAES3BF106100060CFD_g Triticum aestivum TRAES3BF106100060CFD_g I 0.750
Pavir.J00788 Panicum virgatum Pavir.J00788 I 0.750
Pavir.J11717 Panicum virgatum Pavir.J11717 I 0.750
Sb02g006700 Sorghum bicolor Sb02g006700 N 0.729
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.729
Bra014628 Brassica rapa Bra014628 I 0.708
Bra026764 Brassica rapa Bra026764 N 0.708
F775_43210 Aegilops tauschii F775_43210 I 0.708
GRMZM2G472100 Zea mays GRMZM2G472100 N 0.708
GSMUA_Achr5G26530_001 Musa acuminata GSMUA_Achr5G26530_001 I 0.708
GSMUA_Achr8G07230_001 Musa acuminata GSMUA_Achr8G07230_001 I 0.708
LPERR02G10390 Leersia perrieri LPERR02G10390 N 0.708
OPUNC09G00580 Oryza punctata OPUNC09G00580 N 0.708
Sb02g006710 Sorghum bicolor Sb02g006710 N 0.708
Traes_6DL_609A01BD5 Triticum aestivum Traes_6DL_609A01BD5 I 0.708
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.708
gene29503-v1.0-hybrid Fragaria vesca gene29503-v1.0-hybrid I 0.708