OB01G55160 (Oryza brachyantha)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 OB01G55160 T254889_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OB01G55160.1 MADS box 20 67

Links

Other MADS box family TFs
Other Oryza brachyantha TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OMERI09G00900 Oryza meridionalis OMERI09G00900 N 0.917
ONIVA09G00960 Oryza nivara ONIVA09G00960 N 0.917
OLONG_027660 Oryza longistaminata OLONG_027660 N 0.917
OLONG_018222 Oryza longistaminata OLONG_018222 N 0.917
OGLUM01G50090 Oryza glumaepatula OGLUM01G50090 N 0.917
OGLUM09G01140 Oryza glumaepatula OGLUM09G01140 N 0.917
OPUNC01G44670 Oryza punctata OPUNC01G44670 N 0.917
ORGLA01G0394900 Oryza glaberrima ORGLA01G0394900 N 0.917
OS01G0975800 Oryza sativa OS01G0975800 N 0.917
OS09G0116800 Oryza sativa OS09G0116800 N 0.917
ORUFI09G00870 Oryza rufipogon ORUFI09G00870 N 0.917
ORUFI01G49230 Oryza rufipogon ORUFI01G49230 N 0.917
ORGLA09G0007400 Oryza glaberrima ORGLA09G0007400 N 0.917
OBART09G00850 Oryza barthii OBART09G00850 N 0.917
ONIVA01G52000 Oryza nivara ONIVA01G52000 N 0.917
OBART01G45740 Oryza barthii OBART01G45740 N 0.917
BGIOSGA030217 Oryza indica BGIOSGA030217 N 0.917
BGIOSGA005284 Oryza indica BGIOSGA005284 N 0.917
OPUNC09G00580 Oryza punctata OPUNC09G00580 N 0.896
LPERR01G40130 Leersia perrieri LPERR01G40130 N 0.896
LPERR02G10390 Leersia perrieri LPERR02G10390 N 0.896
Sb09g029120 Sorghum bicolor Sb09g029120 I 0.875
Si019951m.g Setaria italica Si019951m.g I 0.875
Pavir.J11717 Panicum virgatum Pavir.J11717 I 0.875
Pavir.J00788 Panicum virgatum Pavir.J00788 I 0.875
AC234185.1_FG006 Zea mays AC234185.1_FG006 I 0.875
GRMZM5G891280 Zea mays GRMZM5G891280 I 0.875
Traes_6DL_609A01BD5 Triticum aestivum Traes_6DL_609A01BD5 I 0.812
TRAES3BF106100060CFD_g Triticum aestivum TRAES3BF106100060CFD_g I 0.812
F775_43210 Aegilops tauschii F775_43210 I 0.812
F775_04223 Aegilops tauschii F775_04223 I 0.812
Pavir.Fb00782 Panicum virgatum Pavir.Fb00782 I 0.793
BRADI4G39420 Brachypodium distachyon BRADI4G39420 N 0.792
GSMUA_Achr8G07230_001 Musa acuminata GSMUA_Achr8G07230_001 I 0.792
Pavir.Bb00804 Panicum virgatum Pavir.Bb00804 N 0.771
GSMUA_Achr5G26530_001 Musa acuminata GSMUA_Achr5G26530_001 I 0.771
OPUNC09G08220 Oryza punctata OPUNC09G08220 N 0.771
Pavir.Ba03370 Panicum virgatum Pavir.Ba03370 N 0.771
Aquca_041_00050 Aquilegia coerulea Aquca_041_00050 N 0.750
Si038960m.g Setaria italica Si038960m.g N 0.729
OB06G21580 Oryza brachyantha OB06G21580 N 0.708
GRMZM2G472100 Zea mays GRMZM2G472100 N 0.708
AMTR_s00025p00244880 Amborella trichopoda AMTR_s00025p00244880 N 0.708