Traes_4BL_011308A76 (Triticum aestivum)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF06217 (GAGA_bind) IPR010409 Traes_4BL_011308A76 T024759_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BPC1
M06715_2.00 		Arabidopsis thaliana
GAGAGAGAGAGAGAGAGAGAGAGA
TCTCTCTCTCTCTCTCTCTCTCTC		 Dap-seq
OMalley et al.(2016)
BPC1_col_a 		0.798 0.798
BPC1
M06716_2.00 		Arabidopsis thaliana
RAGAGAGAGARAGAR
YTCTYTCTCTCTCTY		 Dap-seq
OMalley et al.(2016)
BPC1_colamp_a 		0.798 0.798
BPC1
M09775_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BPC1_Q2 		0.798 0.798
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_4BL_011308A76.1 BBR 1 99

Links

Other BBR family TFs
Other Triticum aestivum TFs

87 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo6g063200 Brassica oleracea Bo6g063200 N 0.000
Bra028443 Brassica rapa Bra028443 N 0.000
PRE1 Arabidopsis lyrata scaffold_704049.1 N 0.000
Thhalv10028074m.g Eutrema salsugineum Thhalv10028074m.g N 0.000