CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bo6g110620
(
Brassica oleracea
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
Bo6g110620
T025658_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo6g110620.1
BED ZF
21
68
SAVWNDFDKVRKGEIHVAICRHCKKRLSGSSASGTSHLRNHLIRCKRR
Links
Other
BED ZF
family TFs
Other
Brassica oleracea
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
REM19
Arabidopsis thaliana
AT1G49480
D
0.000
Bo8g011550
Brassica oleracea
Bo8g011550
I
0.000
Bostr.26675s0223
Boechera stricta
Bostr.26675s0223
I
0.000
Bra014192
Brassica rapa
Bra014192
I
0.000
Bra032286
Brassica rapa
Bra032286
I
0.000
Cagra.4084s0003
Capsella grandiflora
Cagra.4084s0003
I
0.000
Carubv10010224m.g
Capsella rubella
Carubv10010224m.g
I
0.000
GLYMA07G21160
Glycine max
GLYMA07G21160
I
0.000
Gorai.013G039800
Gossypium raimondii
Gorai.013G039800
I
0.000
SapurV1A.0979s0040
Salix purpurea
SapurV1A.0979s0040
I
0.000
RTV1
Arabidopsis lyrata
scaffold_104641.1
I
0.000
Thhalv10012062m.g
Eutrema salsugineum
Thhalv10012062m.g
I
0.000