Bra032286 (Brassica rapa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bra032286 T018918_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
REM19
M06702_2.00 		Arabidopsis thaliana
TKWTTTTTTTTTKKY
RMMAAAAAAAAAWMA		 Dap-seq
OMalley et al.(2016)
REM19_col_a 		0.968 0.968
REM19
M06703_2.00 		Arabidopsis thaliana
NWBTTTTTTTTTTTTKKHHWH
DWDDMMAAAAAAAAAAAAVWN		 Dap-seq
OMalley et al.(2016)
REM19_colamp_a 		0.968 0.968
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra032286.1-P B3 123 217

Links

Other B3 family TFs
Other Brassica rapa TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo5g076230 Brassica oleracea Bo5g076230 I 1.000
REM19 Arabidopsis thaliana AT1G49480 D 0.968
RTV1 Arabidopsis lyrata scaffold_104641.1 I 0.968
Bostr.26675s0223 Boechera stricta Bostr.26675s0223 I 0.968
Cagra.4084s0003 Capsella grandiflora Cagra.4084s0003 I 0.968
Carubv10010224m.g Capsella rubella Carubv10010224m.g I 0.968
Thhalv10012062m.g Eutrema salsugineum Thhalv10012062m.g I 0.968
Bo8g011550 Brassica oleracea Bo8g011550 I 0.863
Bra014192 Brassica rapa Bra014192 I 0.789
SapurV1A.0979s0040 Salix purpurea SapurV1A.0979s0040 I 0.779
Gorai.013G039800 Gossypium raimondii Gorai.013G039800 I 0.747
GLYMA07G21160 Glycine max GLYMA07G21160 I 0.737