Bo5g076230 (Brassica oleracea)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bo5g076230 T018685_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
REM19
M06702_2.00 		Arabidopsis thaliana
TKWTTTTTTTTTKKY
RMMAAAAAAAAAWMA		 Dap-seq
OMalley et al.(2016)
REM19_col_a 		0.968 0.968
REM19
M06703_2.00 		Arabidopsis thaliana
NWBTTTTTTTTTTTTKKHHWH
DWDDMMAAAAAAAAAAAAVWN		 Dap-seq
OMalley et al.(2016)
REM19_colamp_a 		0.968 0.968
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g076230.1 B3 124 218

Links

Other B3 family TFs
Other Brassica oleracea TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra032286 Brassica rapa Bra032286 I 1.000
REM19 Arabidopsis thaliana AT1G49480 D 0.968
RTV1 Arabidopsis lyrata scaffold_104641.1 I 0.968
Bostr.26675s0223 Boechera stricta Bostr.26675s0223 I 0.968
Cagra.4084s0003 Capsella grandiflora Cagra.4084s0003 I 0.968
Carubv10010224m.g Capsella rubella Carubv10010224m.g I 0.968
Thhalv10012062m.g Eutrema salsugineum Thhalv10012062m.g I 0.968
Bo8g011550 Brassica oleracea Bo8g011550 I 0.863
Bra014192 Brassica rapa Bra014192 I 0.789
SapurV1A.0979s0040 Salix purpurea SapurV1A.0979s0040 I 0.779
Gorai.013G039800 Gossypium raimondii Gorai.013G039800 I 0.747
GLYMA07G21160 Glycine max GLYMA07G21160 I 0.737