Bo6g110620 (Brassica oleracea)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 Bo6g110620 T025658_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g110620.1 BED ZF 21 68

Links

Other BED ZF family TFs
Other Brassica oleracea TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.10273s0360 Boechera stricta Bostr.10273s0360 N 0.881
Cagra.10840s0006 Capsella grandiflora Cagra.10840s0006 N 0.881
Carubv10022346m.g Capsella rubella Carubv10022346m.g N 0.881
Thhalv10018229m.g Eutrema salsugineum Thhalv10018229m.g N 0.841
VIT_12s0142g00390 Vitis vinifera VIT_12s0142g00390 N 0.762
TCM_001836 Theobroma cacao TCM_001836 N 0.744
Gorai.012G042700 Gossypium raimondii Gorai.012G042700 N 0.744
PGSC0003DMG400021240 Solanum tuberosum PGSC0003DMG400021240 N 0.738
PRUPE_ppa002590mg Prunus persica PRUPE_ppa002590mg N 0.738
Solyc10g007810.2 Solanum lycopersicum Solyc10g007810.2 N 0.738
Pm014562 Prunus mume Pm014562 N 0.738
mgf000829m Mimulus guttatus mgf000829m N 0.738
gene24495-v1.0-hybrid Fragaria vesca gene24495-v1.0-hybrid N 0.738
cassava35563.valid.m1 Manihot esculenta cassava35563.valid.m1 N 0.727
Eucgr.K01194 Eucalyptus grandis Eucgr.K01194 N 0.727
cassava21091.m1 Manihot esculenta cassava21091.m1 N 0.721
GLYMA08G42321 Glycine max GLYMA08G42321 N 0.714
GLYMA18G12556 Glycine max GLYMA18G12556 N 0.714
Cucsa.185330 Cucumis sativus Cucsa.185330 N 0.714
Aquca_039_00001 Aquilegia coerulea Aquca_039_00001 N 0.714
PK13949.1 Cannabis sativa PK13949.1 N 0.714