cassava35563.valid.m1 (Manihot esculenta)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 cassava35563.valid.m1 T028067_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava35563.valid.m1 BED ZF 16 67

Links

Other BED ZF family TFs
Other Manihot esculenta TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_001836 Theobroma cacao TCM_001836 N 0.977
Gorai.012G042700 Gossypium raimondii Gorai.012G042700 N 0.977
Solyc10g007810.2 Solanum lycopersicum Solyc10g007810.2 N 0.955
VIT_12s0142g00390 Vitis vinifera VIT_12s0142g00390 N 0.955
Cucsa.185330 Cucumis sativus Cucsa.185330 N 0.955
PGSC0003DMG400021240 Solanum tuberosum PGSC0003DMG400021240 N 0.955
cassava21091.m1 Manihot esculenta cassava21091.m1 N 0.953
Eucgr.K01194 Eucalyptus grandis Eucgr.K01194 N 0.932
GLYMA08G42321 Glycine max GLYMA08G42321 N 0.886
mgf000829m Mimulus guttatus mgf000829m N 0.886
GLYMA18G12556 Glycine max GLYMA18G12556 N 0.886
PK13949.1 Cannabis sativa PK13949.1 N 0.864
Bostr.10273s0360 Boechera stricta Bostr.10273s0360 N 0.818
Carubv10022346m.g Capsella rubella Carubv10022346m.g N 0.818
Cagra.10840s0006 Capsella grandiflora Cagra.10840s0006 N 0.818
PRUPE_ppa002590mg Prunus persica PRUPE_ppa002590mg N 0.810
gene24495-v1.0-hybrid Fragaria vesca gene24495-v1.0-hybrid N 0.810
Pm014562 Prunus mume Pm014562 N 0.810
Aquca_039_00001 Aquilegia coerulea Aquca_039_00001 N 0.795
Thhalv10018229m.g Eutrema salsugineum Thhalv10018229m.g N 0.773
Aquca_102_00001 Aquilegia coerulea Aquca_102_00001 N 0.727
Bo6g110620 Brassica oleracea Bo6g110620 N 0.727