Ppa-gei-13 (Pristionchus pacificus)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 PPA19882 T027432_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PPA19882 BED ZF 142 181
PPA19882 BED ZF 368 408

Links

Other BED ZF family TFs
Other Pristionchus pacificus TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALUE_0000590301 Ascaris lumbricoides ALUE_0000590301 N 0.753
ASIM_0001676401 Anisakis simplex ASIM_0001676401 N 0.765
ASU_04966 Ascaris suum ASU_04966 N 0.753
Bm4541 Brugia malayi Bm4541 N 0.765
CBG10038 Caenorhabditis briggsae CBG10038 N 0.889
CBN24253 Caenorhabditis brenneri CBN24253 N 0.889
CJA06713 Caenorhabditis japonica CJA06713 N 0.889
CRE25566 Caenorhabditis remanei CRE25566 N 0.889
DME_0000389301 Dracunculus medinensis DME_0000389301 N 0.704
EEL_0000246901 Elaeophora elaphi EEL_0000246901 N 0.735
EVEC_0000342301 Enterobius vermicularis EVEC_0000342301 N 0.753
Hba_11216 Heterorhabditis bacteriophora Hba_11216 N 0.938
HCOI00039700 Haemonchus contortus HCOI00039700 N 0.926
L596_g10637 Steinernema carpocapsae L596_g10637 N 0.790
L889_g22347 Steinernema feltiae L889_g22347 N 0.778
L892_g20284 Steinernema scapterisci L892_g20284 N 0.778
L893_g18581 Steinernema glaseri L893_g18581 N 0.778
L898_g16670 Steinernema monticolum L898_g16670 N 0.778
LOAG_17673 Loa loa LOAG_17673 N 0.778
nAv.1.0.1.g09085 Acanthocheilonema viteae nAv.1.0.1.g09085 N 0.747
nDi.2.2.2.g00142 Dirofilaria immitis nDi.2.2.2.g00142 N 0.765
nLs.2.1.2.g08165 Litomosoides sigmodontis nLs.2.1.2.g08165 N 0.735
nOo.2.0.1.g06019 Onchocerca ochengi nOo.2.0.1.g06019 N 0.716
SMUV_0000711101 Syphacia muris SMUV_0000711101 N 0.741
TCLT_0000679601 Thelazia callipaeda TCLT_0000679601 N 0.741
gei-13 Caenorhabditis elegans WBGene00001570 N 0.889
WBGene00245587 Onchocerca volvulus WBGene00245587 N 0.759