CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NAI1
(
Arabidopsis thaliana
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
AT2G22770
T030621_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT2G22770.1
bHLH
130
178
LKEHVLAERKRRQKLNERLIALSALLPGLKKTDKATVLEDAIKHLKQLQ
Links
Other
bHLH
family TFs
Other
Arabidopsis thaliana
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29729.m002369
Ricinus communis
29729.m002369
I
29915.m000479
Ricinus communis
29915.m000479
I
30174.m008651
Ricinus communis
30174.m008651
I
AMTR_s00077p00103580
Amborella trichopoda
AMTR_s00077p00103580
I
AMTR_s00077p00103880
Amborella trichopoda
AMTR_s00077p00103880
I
Aquca_013_00135
Aquilegia coerulea
Aquca_013_00135
I
Aquca_027_00037
Aquilegia coerulea
Aquca_027_00037
I
WRKY70
Arabidopsis thaliana
AT3G56400
D
BGIOSGA001093
Oryza indica
BGIOSGA001093
I
BGIOSGA012571
Oryza indica
BGIOSGA012571
I
BGIOSGA019621
Oryza indica
BGIOSGA019621
I
Bo00913s010
Brassica oleracea
Bo00913s010
I
Bo3g035140
Brassica oleracea
Bo3g035140
I
Bo4g012750
Brassica oleracea
Bo4g012750
I
Bo4g190390
Brassica oleracea
Bo4g190390
I
Bo6g071110
Brassica oleracea
Bo6g071110
I
Bo8g090820
Brassica oleracea
Bo8g090820
I
Bostr.20505s0112
Boechera stricta
Bostr.20505s0112
I
Bostr.9345s0060
Boechera stricta
Bostr.9345s0060
I
Bra000203
Brassica rapa
Bra000203
I
Bra003239
Brassica rapa
Bra003239
I
Bra004586
Brassica rapa
Bra004586
I
Bra007243
Brassica rapa
Bra007243
I
Bra014692
Brassica rapa
Bra014692
I
Bra016974
Brassica rapa
Bra016974
I
BRADI2G30695
Brachypodium distachyon
BRADI2G30695
I
BRADI2G44270
Brachypodium distachyon
BRADI2G44270
I
BRADI2G45480
Brachypodium distachyon
BRADI2G45480
I
BRADI3G34850
Brachypodium distachyon
BRADI3G34850
I
Cagra.0925s0056
Capsella grandiflora
Cagra.0925s0056
I
Cagra.1642s0039
Capsella grandiflora
Cagra.1642s0039
I
Carubv10017349m.g
Capsella rubella
Carubv10017349m.g
I
Carubv10024972m.g
Capsella rubella
Carubv10024972m.g
I
cassava23183.valid.m1
Manihot esculenta
cassava23183.valid.m1
I
cassava25180.valid.m1
Manihot esculenta
cassava25180.valid.m1
I
cassava36286.valid.m1
Manihot esculenta
cassava36286.valid.m1
I
cassava43790.valid.m1
Manihot esculenta
cassava43790.valid.m1
I
cassava7524.valid.m1
Manihot esculenta
cassava7524.valid.m1
I
cassava7525.valid.m1
Manihot esculenta
cassava7525.valid.m1
I
Ca_04100
Cicer arietinum
Ca_04100
I
Ca_09495
Cicer arietinum
Ca_09495
I
Ca_12915
Cicer arietinum
Ca_12915
I
chr1.CM0320.400.nd
Lotus japonicus
chr1.CM0320.400.nd
I
Ciclev10012055m.g
Citrus clementina
Ciclev10012055m.g
I
Ciclev10032192m.g
Citrus clementina
Ciclev10032192m.g
I
Ciclev10033384m.g
Citrus clementina
Ciclev10033384m.g
I
Cla004301
Citrullus lanatus
Cla004301
I
Cla007424
Citrullus lanatus
Cla007424
I
Cla018337
Citrullus lanatus
Cla018337
I
Cucsa.012940
Cucumis sativus
Cucsa.012940
I
Cucsa.078810
Cucumis sativus
Cucsa.078810
I
Cucsa.143830
Cucumis sativus
Cucsa.143830
I
Cucsa.177060
Cucumis sativus
Cucsa.177060
I
Eucgr.G03144
Eucalyptus grandis
Eucgr.G03144
I
Eucgr.G03145
Eucalyptus grandis
Eucgr.G03145
I
Eucgr.J00106
Eucalyptus grandis
Eucgr.J00106
I
Eucgr.K01289
Eucalyptus grandis
Eucgr.K01289
I
evm.TU.supercontig_19.44
Carica papaya
evm.TU.supercontig_19.44
I
evm.TU.supercontig_86.64
Carica papaya
evm.TU.supercontig_86.64
I
evm.TU.supercontig_86.65
Carica papaya
evm.TU.supercontig_86.65
I
F775_02122
Aegilops tauschii
F775_02122
I
F775_25840
Aegilops tauschii
F775_25840
I
F775_25856
Aegilops tauschii
F775_25856
I
F775_27443
Aegilops tauschii
F775_27443
I
WRKY70
Arabidopsis lyrata
fgenesh2_kg.5__2072__AT3G56400.1
I
gene13546-v1.0-hybrid
Fragaria vesca
gene13546-v1.0-hybrid
I
gene13547-v1.0-hybrid
Fragaria vesca
gene13547-v1.0-hybrid
I
gene13549-v1.0-hybrid
Fragaria vesca
gene13549-v1.0-hybrid
I
gene13554-v1.0-hybrid
Fragaria vesca
gene13554-v1.0-hybrid
I
gene21365-v1.0-hybrid
Fragaria vesca
gene21365-v1.0-hybrid
I
gene32076-v1.0-hybrid
Fragaria vesca
gene32076-v1.0-hybrid
I
GLYMA01G43420
Glycine max
GLYMA01G43420
I
GLYMA03G00460
Glycine max
GLYMA03G00460
I
GLYMA04G40121
Glycine max
GLYMA04G40121
I
GLYMA04G40130
Glycine max
GLYMA04G40130
I
GLYMA06G14720
Glycine max
GLYMA06G14720
I
GLYMA09G41050
Glycine max
GLYMA09G41050
I
GLYMA14G36430
Glycine max
GLYMA14G36430
I
GLYMA14G36438
Glycine max
GLYMA14G36438
I
GLYMA14G36446
Glycine max
GLYMA14G36446
I
GLYMA16G34590
Glycine max
GLYMA16G34590
I
GLYMA18G44560
Glycine max
GLYMA18G44560
I
Gorai.005G003900
Gossypium raimondii
Gorai.005G003900
I
Gorai.008G253300
Gossypium raimondii
Gorai.008G253300
I
Gorai.009G292600
Gossypium raimondii
Gorai.009G292600
I
Gorai.010G219200
Gossypium raimondii
Gorai.010G219200
I
Gorai.012G013900
Gossypium raimondii
Gorai.012G013900
I
Gorai.013G008300
Gossypium raimondii
Gorai.013G008300
I
GRMZM2G004060
Zea mays
GRMZM2G004060
I
GRMZM2G025895
Zea mays
GRMZM2G025895
I
GRMZM2G061408
Zea mays
GRMZM2G061408
I
GRMZM2G063880
Zea mays
GRMZM2G063880
I
GRMZM2G408462
Zea mays
GRMZM2G408462
I
GRMZM2G411766
Zea mays
GRMZM2G411766
I
GSMUA_Achr1G27980_001
Musa acuminata
GSMUA_Achr1G27980_001
I
GSMUA_Achr5G07490_001
Musa acuminata
GSMUA_Achr5G07490_001
I
GSMUA_Achr6G05710_001
Musa acuminata
GSMUA_Achr6G05710_001
I
GSMUA_Achr8G01730_001
Musa acuminata
GSMUA_Achr8G01730_001
I
LPERR01G21480
Leersia perrieri
LPERR01G21480
I
LPERR03G14340
Leersia perrieri
LPERR03G14340
I
LPERR05G09130
Leersia perrieri
LPERR05G09130
I
Lus10012870.g
Linum usitatissimum
Lus10012870.g
I
Lus10029021.g
Linum usitatissimum
Lus10029021.g
I
Lus10030517.g
Linum usitatissimum
Lus10030517.g
I
Lus10034244.g
Linum usitatissimum
Lus10034244.g
I
MDP0000175240
Malus domestica
MDP0000175240
I
MDP0000754989
Malus domestica
MDP0000754989
I
mgf002542m
Mimulus guttatus
mgf002542m
I
mgf009193m
Mimulus guttatus
mgf009193m
I
MLOC_17779
Hordeum vulgare
MLOC_17779
I
MLOC_44455
Hordeum vulgare
MLOC_44455
I
MLOC_65699
Hordeum vulgare
MLOC_65699
I
MLOC_71897
Hordeum vulgare
MLOC_71897
I
MLOC_79171
Hordeum vulgare
MLOC_79171
I
MTR_2g075680
Medicago truncatula
MTR_2g075680
I
MTR_2g075690
Medicago truncatula
MTR_2g075690
I
MTR_3g093830
Medicago truncatula
MTR_3g093830
I
MTR_5g067700
Medicago truncatula
MTR_5g067700
I
MTR_7g073380
Medicago truncatula
MTR_7g073380
I
OB0086G10030
Oryza brachyantha
OB0086G10030
I
OB05G34020
Oryza brachyantha
OB05G34020
I
OBART01G25160
Oryza barthii
OBART01G25160
I
OBART03G16400
Oryza barthii
OBART03G16400
I
OBART05G11710
Oryza barthii
OBART05G11710
I
OBART05G26430
Oryza barthii
OBART05G26430
I
OGLUM01G28930
Oryza glumaepatula
OGLUM01G28930
I
OGLUM03G16780
Oryza glumaepatula
OGLUM03G16780
I
OGLUM05G12430
Oryza glumaepatula
OGLUM05G12430
I
OGLUM05G28080
Oryza glumaepatula
OGLUM05G28080
I
OLONG_010067
Oryza longistaminata
OLONG_010067
I
OLONG_024544
Oryza longistaminata
OLONG_024544
I
OMERI01G22920
Oryza meridionalis
OMERI01G22920
I
OMERI03G14670
Oryza meridionalis
OMERI03G14670
I
OMERI03G30520
Oryza meridionalis
OMERI03G30520
I
OMERI05G10380
Oryza meridionalis
OMERI05G10380
I
ONIVA01G28420
Oryza nivara
ONIVA01G28420
I
ONIVA03G17390
Oryza nivara
ONIVA03G17390
I
ONIVA05G12100
Oryza nivara
ONIVA05G12100
I
ONIVA05G28480
Oryza nivara
ONIVA05G28480
I
OPUNC01G25080
Oryza punctata
OPUNC01G25080
I
OPUNC05G10020
Oryza punctata
OPUNC05G10020
I
OPUNC05G24020
Oryza punctata
OPUNC05G24020
I
OPUNC07G11930
Oryza punctata
OPUNC07G11930
I
orange1.1g018407m.g
Citrus sinensis
orange1.1g018407m.g
I
orange1.1g020291m.g
Citrus sinensis
orange1.1g020291m.g
I
orange1.1g021598m.g
Citrus sinensis
orange1.1g021598m.g
I
ORGLA01G0204900
Oryza glaberrima
ORGLA01G0204900
I
ORGLA03G0413100
Oryza glaberrima
ORGLA03G0413100
I
ORGLA05G0099400
Oryza glaberrima
ORGLA05G0099400
I
ORGLA05G0229200
Oryza glaberrima
ORGLA05G0229200
I
ORUFI01G28020
Oryza rufipogon
ORUFI01G28020
I
ORUFI03G16960
Oryza rufipogon
ORUFI03G16960
I
ORUFI05G12710
Oryza rufipogon
ORUFI05G12710
I
ORUFI05G28340
Oryza rufipogon
ORUFI05G28340
I
OS01G0656400
Oryza sativa
OS01G0656400
I
OS03G0335200
Oryza sativa
OS03G0335200
I
OS05G0322900
Oryza sativa
OS05G0322900
I
OS05G0571200
Oryza sativa
OS05G0571200
I
Pavir.Ba02750
Panicum virgatum
Pavir.Ba02750
I
Pavir.Bb01218
Panicum virgatum
Pavir.Bb01218
I
Pavir.Ca02012
Panicum virgatum
Pavir.Ca02012
I
Pavir.Cb01173
Panicum virgatum
Pavir.Cb01173
I
Pavir.Eb01752
Panicum virgatum
Pavir.Eb01752
I
Pavir.Fa01520
Panicum virgatum
Pavir.Fa01520
I
Pavir.J01329
Panicum virgatum
Pavir.J01329
I
Pavir.J03334
Panicum virgatum
Pavir.J03334
I
Pavir.J37854
Panicum virgatum
Pavir.J37854
I
PDK_20s1440981g001
Phoenix dactylifera
PDK_20s1440981g001
I
PDK_20s1521921g002
Phoenix dactylifera
PDK_20s1521921g002
I
PDK_20s1571901g001
Phoenix dactylifera
PDK_20s1571901g001
I
PGSC0003DMG400005835
Solanum tuberosum
PGSC0003DMG400005835
I
PGSC0003DMG400008391
Solanum tuberosum
PGSC0003DMG400008391
I
PGSC0003DMG400012160
Solanum tuberosum
PGSC0003DMG400012160
I
PGSC0003DMG400020608
Solanum tuberosum
PGSC0003DMG400020608
I
PGSC0003DMG400027582
Solanum tuberosum
PGSC0003DMG400027582
I
PGSC0003DMG400029207
Solanum tuberosum
PGSC0003DMG400029207
I
PK03324.1
Cannabis sativa
PK03324.1
I
PK10616.1
Cannabis sativa
PK10616.1
I
PK21378.1
Cannabis sativa
PK21378.1
I
Pm003013
Prunus mume
Pm003013
I
Pm003014
Prunus mume
Pm003014
I
Pm003015
Prunus mume
Pm003015
I
Pm019286
Prunus mume
Pm019286
I
POPTR_0002s17010
Populus trichocarpa
POPTR_0002s17010
I
POPTR_0006s10950
Populus trichocarpa
POPTR_0006s10950
I
POPTR_0016s14490
Populus trichocarpa
POPTR_0016s14490
I
PRUPE_ppa020736mg
Prunus persica
PRUPE_ppa020736mg
I
PRUPE_ppa025912mg
Prunus persica
PRUPE_ppa025912mg
I
PRUPE_ppa026125mg
Prunus persica
PRUPE_ppa026125mg
I
PRUPE_ppa026704mg
Prunus persica
PRUPE_ppa026704mg
I
SapurV1A.0065s0580
Salix purpurea
SapurV1A.0065s0580
I
SapurV1A.0356s0010
Salix purpurea
SapurV1A.0356s0010
I
SapurV1A.0914s0120
Salix purpurea
SapurV1A.0914s0120
I
Sb02g022280
Sorghum bicolor
Sb02g022280
I
Sb03g029920
Sorghum bicolor
Sb03g029920
I
Sb06g013835
Sorghum bicolor
Sb06g013835
I
Sb07g019400
Sorghum bicolor
Sb07g019400
I
Sb08g005080
Sorghum bicolor
Sb08g005080
I
Sb09g029050
Sorghum bicolor
Sb09g029050
I
SELMODRAFT_113487
Selaginella moellendorffii
SELMODRAFT_113487
I
SELMODRAFT_29692
Selaginella moellendorffii
SELMODRAFT_29692
I
Si002203m.g
Setaria italica
Si002203m.g
I
Si015433m.g
Setaria italica
Si015433m.g
I
Si022702m.g
Setaria italica
Si022702m.g
I
Si022843m.g
Setaria italica
Si022843m.g
I
Si030531m.g
Setaria italica
Si030531m.g
I
Solyc03g095770.2
Solanum lycopersicum
Solyc03g095770.2
I
Solyc08g008280.2
Solanum lycopersicum
Solyc08g008280.2
I
Solyc08g082110.2
Solanum lycopersicum
Solyc08g082110.2
I
Solyc09g015770.2
Solanum lycopersicum
Solyc09g015770.2
I
TCM_006116
Theobroma cacao
TCM_006116
I
TCM_019689
Theobroma cacao
TCM_019689
I
TCM_045556
Theobroma cacao
TCM_045556
I
Thhalv10006146m.g
Eutrema salsugineum
Thhalv10006146m.g
I
Thhalv10016713m.g
Eutrema salsugineum
Thhalv10016713m.g
I
TRAES3BF051200110CFD_g
Triticum aestivum
TRAES3BF051200110CFD_g
I
Traes_1BL_73811B853
Triticum aestivum
Traes_1BL_73811B853
I
Traes_2AS_6269D889E
Triticum aestivum
Traes_2AS_6269D889E
I
Traes_2BS_B65714572
Triticum aestivum
Traes_2BS_B65714572
I
Traes_3AL_6E92D4E1F
Triticum aestivum
Traes_3AL_6E92D4E1F
I
TRIUR3_29889
Triticum urartu
TRIUR3_29889
I
VIT_13s0067g03140
Vitis vinifera
VIT_13s0067g03140
I