Bo4g150960 (Brassica oleracea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bo4g150960 T031172_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G22750
M06730_2.00 		Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK		 Dap-seq
OMalley et al.(2016)
bHLH18_col_a 		0.914 1.000
OS01G0235700
M09894_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BHLH66_01 		0.882 0.612
MYC2
M01699_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8083 		0.858 0.592
PK18474.1
M01127_2.00 		Cannabis sativa
NRCACGTGCN
NGCACGTGYN		 PBM
Lambert et al.(2019)
pTH10273 		0.858 0.592
PK18474.1
M01768_2.00 		Cannabis sativa
NCACGWK
MWCGTGN		 PBM
Weirauch et al.(2014)
pTH9589 		0.858 0.592
MYC4
M01707_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8260 		0.858 0.571
MYC3
M01712_2.00 		Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK		 PBM
Weirauch et al.(2014)
pTH8854 		0.858 0.571
BHLH13
M01698_2.00 		Arabidopsis thaliana
MCACGTGV
BCACGTGK		 PBM
Weirauch et al.(2014)
pTH7565 		0.846 0.571
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g150960.1 bHLH 144 192

Links

Other bHLH family TFs
Other Brassica oleracea TFs

529 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HSFA4A Arabidopsis thaliana AT4G18880 D
BGIOSGA006438 Oryza indica BGIOSGA006438 I
Bo01835s010 Brassica oleracea Bo01835s010 N
Bo1g020010 Brassica oleracea Bo1g020010 I
Bo2g165540 Brassica oleracea Bo2g165540 I
Bo2g165560 Brassica oleracea Bo2g165560 I
Bo3g157380 Brassica oleracea Bo3g157380 I
Bo4g190160 Brassica oleracea Bo4g190160 I
Bo4g190190 Brassica oleracea Bo4g190190 N
Bo7g106320 Brassica oleracea Bo7g106320 I
Bostr.0556s0470 Boechera stricta Bostr.0556s0470 I
Bostr.30275s0365 Boechera stricta Bostr.30275s0365 I
Bostr.3359s0057 Boechera stricta Bostr.3359s0057 I
Bra002882 Brassica rapa Bra002882 I
Bra012571 Brassica rapa Bra012571 I
Bra013358 Brassica rapa Bra013358 I
Bra013406 Brassica rapa Bra013406 I
Bra013412 Brassica rapa Bra013412 I
Bra016994 Brassica rapa Bra016994 N
Bra016996 Brassica rapa Bra016996 I
Bra016998 Brassica rapa Bra016998 I
Bra029226 Brassica rapa Bra029226 I
Bra030021 Brassica rapa Bra030021 I
BRADI3G43710 Brachypodium distachyon BRADI3G43710 I
Cagra.2848s0007 Capsella grandiflora Cagra.2848s0007 I
Cagra.4306s0004 Capsella grandiflora Cagra.4306s0004 I
Carubv10004953m.g Capsella rubella Carubv10004953m.g I
Carubv10027643m.g Capsella rubella Carubv10027643m.g I
cassava14764.m1 Manihot esculenta cassava14764.m1 I
cassava24811.valid.m1 Manihot esculenta cassava24811.valid.m1 I
ENSAMEG00000017238 Ailuropoda melanoleuca ENSAMEG00000017238 I
HSF4 Bos taurus ENSBTAG00000003514 I
ENSBTAP00000004568-D1 Bos grunniens ENSBTAP00000004568-D1 I
HSF4 Canis familiaris ENSCAFG00000020379 I
HSF4 Cavia porcellus ENSCPOG00000010834 I
ENSCSAG00000003768 Chlorocebus sabaeus ENSCSAG00000003768 I
HSF4 Dasypus novemcinctus ENSDNOG00000032363 I
Hsf4 Dipodomys ordii ENSDORG00000015128 I
HSF4 Equus caballus ENSECAG00000016708 I
HSF4 Felis catus ENSFCAG00000014099 I
HSF4 Homo sapiens ENSG00000102878 D
HSF4 Gorilla gorilla ENSGGOG00000011899 I
HSF4 Myotis lucifugus ENSMLUG00000011083 I
HSF4 Macaca mulatta ENSMMUG00000005906 I
ENSMPUG00000005418 Mustela putorius furo ENSMPUG00000005418 I
Hsf4 Mus musculus ENSMUSG00000033249 I
ENSNLEG00000004338 Nomascus leucogenys ENSNLEG00000004338 I
ENSOARG00000002740 Ovis aries ENSOARG00000002740 I
HSF4 Oryctolagus cuniculus ENSOCUG00000010001 I
HSF4 Otolemur garnettii ENSOGAG00000001391 I
HSF4 Ochotona princeps ENSOPRG00000015074 I
ENSPANG00000005017 Papio anubis ENSPANG00000005017 I
ENSPPYG00000007441 Pongo abelii ENSPPYG00000007441 I
HSF4 Pan troglodytes ENSPTRG00000034007 I
HSF4 Pteropus vampyrus ENSPVAG00000000402 I
Hsf4 Rattus norvegicus ENSRNOG00000015253 I
HSF4 Sus scrofa ENSSSCG00000002792 I
ENSSTOG00000027009 Ictidomys tridecemlineatus ENSSTOG00000027009 I
HSF4 Tursiops truncatus ENSTTRG00000010241 I
Eucgr.E02813 Eucalyptus grandis Eucgr.E02813 I
EuGene.0200010072 Micromonas sp RCC299 EuGene.0200010072 I
F775_00937 Aegilops tauschii F775_00937 I
AT-HSFA4A Arabidopsis lyrata fgenesh2_kg.7__2405__AT4G18880.1 I
gene23802-v1.0-hybrid Fragaria vesca gene23802-v1.0-hybrid I
GLYMA05G29470 Glycine max GLYMA05G29470 I
GLYMA08G12630 Glycine max GLYMA08G12630 I
Gorai.011G036400 Gossypium raimondii Gorai.011G036400 I
GRMZM2G179802 Zea mays GRMZM2G179802 I
LPERR02G13860 Leersia perrieri LPERR02G13860 I
Lus10005420.g Linum usitatissimum Lus10005420.g I
Lus10015237.g Linum usitatissimum Lus10015237.g I
MDP0000126826 Malus domestica MDP0000126826 I
mgf006143m Mimulus guttatus mgf006143m I
mgf006947m Mimulus guttatus mgf006947m I
MTR_8g087540 Medicago truncatula MTR_8g087540 I
OGLUM02G17550 Oryza glumaepatula OGLUM02G17550 I
OMERI02G17330 Oryza meridionalis OMERI02G17330 I
ONIVA02G18700 Oryza nivara ONIVA02G18700 I
OPUNC02G15430 Oryza punctata OPUNC02G15430 I
ORUFI02G18130 Oryza rufipogon ORUFI02G18130 I
HSFA5 Oryza sativa OS02G0496100 I
PK09831.1 Cannabis sativa PK09831.1 I
Pm010169 Prunus mume Pm010169 I
POPTR_0004s06090 Populus trichocarpa POPTR_0004s06090 I
POPTR_0011s06820 Populus trichocarpa POPTR_0011s06820 I
PRUPE_ppa006534mg Prunus persica PRUPE_ppa006534mg I
Si019082m.g Setaria italica Si019082m.g I
TCM_029630 Theobroma cacao TCM_029630 I
Traes_6AS_1537629B3 Triticum aestivum Traes_6AS_1537629B3 I
Traes_6DS_C59B6322F Triticum aestivum Traes_6DS_C59B6322F I
TRIUR3_11025 Triticum urartu TRIUR3_11025 I