CABZ01066696.1 (Danio rerio)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSDARG00000091603 T033735_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TAL1
M08734_2.00 		Homo sapiens
BSTTATCWSNNNNNNVCVV
BBGBNNNNNNSWGATAASV		 Misc
Kulakovskiy et al.(2013)
TAL1_HUMAN.H11MO.0.A 		0.890 0.904
Tal1
M08759_2.00 		Mus musculus
BYKBNNNNNNVWGATAAVVN
NBBTTATCWBNNNNNNVMRV		 Misc
Kulakovskiy et al.(2013)
TAL1_MOUSE.H11MO.0.A 		0.890 0.904
Tal1
M09471_2.00 		Mus musculus
NVCWKMWG
CWKMWGBN		 Misc
Heinz et al.(2010)
HPC7-Scl_GSE13511 		0.890 0.904
Tal1
M09472_2.00 		Mus musculus
YTATCWSNNNNNNVCAGVHN
NDBCTGBNNNNNNSWGATAR		 Misc
Heinz et al.(2010)
Ter119-SCL_GSE18720 		0.890 0.904
TAL1
M09870_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TAL1_01 		0.890 0.904
TAL1
M09871_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TAL1_Q6_01 		0.890 0.904
TAL1
M09872_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TAL1_Q6 		0.890 0.904
LYL1
M08714_2.00 		Homo sapiens
VNRRNVVCAGMWGN
NCWKCTGBBNYYNB		 Misc
Kulakovskiy et al.(2013)
LYL1_HUMAN.H11MO.0.A 		0.888 0.904
Lyl1
M08763_2.00 		Mus musculus
VNRRNVVCAGMWGN
NCWKCTGBBNYYNB		 Misc
Kulakovskiy et al.(2013)
LYL1_MOUSE.H11MO.0.A 		0.853 0.885
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000108420 bHLH 268 320
ENSDARP00000135100 bHLH 195 247

Links

Other bHLH family TFs
Other Danio rerio TFs

224 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29646.m001068 Ricinus communis 29646.m001068 I
30174.m008698 Ricinus communis 30174.m008698 I
GBF2 Arabidopsis lyrata Al_scaffold_0006_3899 I
AMTR_s00158p00056990 Amborella trichopoda AMTR_s00158p00056990 I
Aquca_002_01218 Aquilegia coerulea Aquca_002_01218 I
Aquca_013_00209 Aquilegia coerulea Aquca_013_00209 I
Aquca_037_00034 Aquilegia coerulea Aquca_037_00034 I
BZIP16 Arabidopsis thaliana AT2G35530 D
GBF3 Arabidopsis thaliana AT2G46270 D
GBF2 Arabidopsis thaliana AT4G01120 D
GBF1 Arabidopsis thaliana AT4G36730 D
BGIOSGA001085 Oryza indica BGIOSGA001085 I
BGIOSGA020389 Oryza indica BGIOSGA020389 I
Bo1g005460 Brassica oleracea Bo1g005460 I
Bo4g010410 Brassica oleracea Bo4g010410 I
Bo4g038560 Brassica oleracea Bo4g038560 I
Bo9g003700 Brassica oleracea Bo9g003700 I
Bostr.23794s0549 Boechera stricta Bostr.23794s0549 I
Bostr.7365s0064 Boechera stricta Bostr.7365s0064 I
Bostr.7867s1529 Boechera stricta Bostr.7867s1529 I
Bra004550 Brassica rapa Bra004550 I
Bra010572 Brassica rapa Bra010572 I
Bra011701 Brassica rapa Bra011701 I
Bra037382 Brassica rapa Bra037382 I
BRADI2G15940 Brachypodium distachyon BRADI2G15940 I
BRADI2G45567 Brachypodium distachyon BRADI2G45567 I
Cagra.0050s0071 Capsella grandiflora Cagra.0050s0071 I
Cagra.0993s0063 Capsella grandiflora Cagra.0993s0063 I
Cagra.1372s0011 Capsella grandiflora Cagra.1372s0011 I
Cagra.5996s0003 Capsella grandiflora Cagra.5996s0003 I
Carubv10001247m.g Capsella rubella Carubv10001247m.g I
Carubv10005287m.g Capsella rubella Carubv10005287m.g I
Carubv10023434m.g Capsella rubella Carubv10023434m.g I
cassava29861.valid.m1 Manihot esculenta cassava29861.valid.m1 I
cassava29862.valid.m1 Manihot esculenta cassava29862.valid.m1 I
cassava43569.valid.m1 Manihot esculenta cassava43569.valid.m1 I
cassava43570.valid.m1 Manihot esculenta cassava43570.valid.m1 I
cassava43571.valid.m1 Manihot esculenta cassava43571.valid.m1 I
cassava45491.m1 Manihot esculenta cassava45491.m1 I
cassava46468.m1 Manihot esculenta cassava46468.m1 I
Ca_01293 Cicer arietinum Ca_01293 I
Ca_17787 Cicer arietinum Ca_17787 I
chr1.CM0579.280.nd Lotus japonicus chr1.CM0579.280.nd I
Ciclev10020314m.g Citrus clementina Ciclev10020314m.g I
Ciclev10025963m.g Citrus clementina Ciclev10025963m.g I
estExt_fgenesh1_pg.C_10522 Micromonas pusilla estExt_fgenesh1_pg.C_10522 I
estExt_fgenesh2_pg.C_Chr_020452 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_020452 I
Eucgr.E00078 Eucalyptus grandis Eucgr.E00078 I
evm.TU.supercontig_158.7 Carica papaya evm.TU.supercontig_158.7 I
F775_07803 Aegilops tauschii F775_07803 I
GBF3 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4002338 I
gene18928-v1.0-hybrid Fragaria vesca gene18928-v1.0-hybrid I
gene32024-v1.0-hybrid Fragaria vesca gene32024-v1.0-hybrid I
GLYMA03G41590 Glycine max GLYMA03G41590 I
GLYMA07G06620 Glycine max GLYMA07G06620 I
GLYMA08G34280 Glycine max GLYMA08G34280 I
GLYMA16G03190 Glycine max GLYMA16G03190 I
GLYMA16G15810 Glycine max GLYMA16G15810 I
GLYMA19G44190 Glycine max GLYMA19G44190 I
Gorai.004G153100 Gossypium raimondii Gorai.004G153100 I
Gorai.004G181900 Gossypium raimondii Gorai.004G181900 I
Gorai.007G105100 Gossypium raimondii Gorai.007G105100 I
Gorai.008G123200 Gossypium raimondii Gorai.008G123200 I
GRMZM2G011932 Zea mays GRMZM2G011932 I
GRMZM2G117851 Zea mays GRMZM2G117851 I
GRMZM2G160136 Zea mays GRMZM2G160136 I
GRMZM2G358701 Zea mays GRMZM2G358701 I
GRMZM5G848942 Zea mays GRMZM5G848942 I
GSMUA_Achr1G05050_001 Musa acuminata GSMUA_Achr1G05050_001 I
GSMUA_Achr4G04530_001 Musa acuminata GSMUA_Achr4G04530_001 I
GSMUA_Achr4G11610_001 Musa acuminata GSMUA_Achr4G11610_001 I
GSMUA_Achr4G18980_001 Musa acuminata GSMUA_Achr4G18980_001 I
GSMUA_Achr5G14150_001 Musa acuminata GSMUA_Achr5G14150_001 I
GSMUA_Achr6G32000_001 Musa acuminata GSMUA_Achr6G32000_001 I
GSMUA_Achr9G05310_001 Musa acuminata GSMUA_Achr9G05310_001 I
LPERR01G21580 Leersia perrieri LPERR01G21580 I
LPERR05G21930 Leersia perrieri LPERR05G21930 I
Lus10003034.g Linum usitatissimum Lus10003034.g I
Lus10005146.g Linum usitatissimum Lus10005146.g I
Lus10014324.g Linum usitatissimum Lus10014324.g I
Lus10026033.g Linum usitatissimum Lus10026033.g I
MDP0000138052 Malus domestica MDP0000138052 I
MDP0000231274 Malus domestica MDP0000231274 I
MDP0000239688 Malus domestica MDP0000239688 I
MDP0000493795 Malus domestica MDP0000493795 I
MDP0000545420 Malus domestica MDP0000545420 I
mgf003302m Mimulus guttatus mgf003302m I
mgf013423m Mimulus guttatus mgf013423m I
MLOC_6711 Hordeum vulgare MLOC_6711 I
MTR_7g116890 Medicago truncatula MTR_7g116890 I
MTR_8g070820 Medicago truncatula MTR_8g070820 I
OB01G34490 Oryza brachyantha OB01G34490 I
OB05G33790 Oryza brachyantha OB05G33790 I
OBART01G25300 Oryza barthii OBART01G25300 I
OBART05G26280 Oryza barthii OBART05G26280 I
OGLUM01G29060 Oryza glumaepatula OGLUM01G29060 I
OGLUM05G27920 Oryza glumaepatula OGLUM05G27920 I
OLONG_003667 Oryza longistaminata OLONG_003667 I
OLONG_022047 Oryza longistaminata OLONG_022047 I
OMERI01G23000 Oryza meridionalis OMERI01G23000 I
OMERI03G30340 Oryza meridionalis OMERI03G30340 I
ONIVA01G28540 Oryza nivara ONIVA01G28540 I
ONIVA05G28290 Oryza nivara ONIVA05G28290 I
OPUNC01G25140 Oryza punctata OPUNC01G25140 I
OPUNC05G23850 Oryza punctata OPUNC05G23850 I
orange1.1g014660m.g Citrus sinensis orange1.1g014660m.g I
orange1.1g018605m.g Citrus sinensis orange1.1g018605m.g I
ORGLA01G0206000 Oryza glaberrima ORGLA01G0206000 I
ORGLA05G0227800 Oryza glaberrima ORGLA05G0227800 I
ORUFI01G28110 Oryza rufipogon ORUFI01G28110 I
ORUFI05G28170 Oryza rufipogon ORUFI05G28170 I
OS01G0658900 Oryza sativa OS01G0658900 I
OS05G0569300 Oryza sativa OS05G0569300 I
Pavir.Ca00968 Panicum virgatum Pavir.Ca00968 I
Pavir.Ea02315 Panicum virgatum Pavir.Ea02315 I
Pavir.J01411 Panicum virgatum Pavir.J01411 I
PDK_20s1349941g001 Phoenix dactylifera PDK_20s1349941g001 I
PDK_20s1708971g001 Phoenix dactylifera PDK_20s1708971g001 I
PGSC0003DMG400000088 Solanum tuberosum PGSC0003DMG400000088 I
PGSC0003DMG400012660 Solanum tuberosum PGSC0003DMG400012660 I
PGSC0003DMG400033876 Solanum tuberosum PGSC0003DMG400033876 I
PK07494.1 Cannabis sativa PK07494.1 I
PK09653.1 Cannabis sativa PK09653.1 D
Pm018422 Prunus mume Pm018422 I
Pm024103 Prunus mume Pm024103 I
Pm026586 Prunus mume Pm026586 I
POPTR_0002s16870 Populus trichocarpa POPTR_0002s16870 I
POPTR_0005s12750 Populus trichocarpa POPTR_0005s12750 I
POPTR_0007s12460 Populus trichocarpa POPTR_0007s12460 I
POPTR_0014s08990 Populus trichocarpa POPTR_0014s08990 I
PRUPE_ppa006173mg Prunus persica PRUPE_ppa006173mg I
PRUPE_ppa008024mg Prunus persica PRUPE_ppa008024mg I
PRUPE_ppa020524mg Prunus persica PRUPE_ppa020524mg I
Q40645_ORYSA Oryza sativa Q40645_ORYSA D
Q41109_PHAVU Phaseolus vulgaris Q41109_PHAVU D
SapurV1A.0013s0770 Salix purpurea SapurV1A.0013s0770 I
SapurV1A.0255s0070 Salix purpurea SapurV1A.0255s0070 I
SapurV1A.0817s0110 Salix purpurea SapurV1A.0817s0110 I
Sb03g030050 Sorghum bicolor Sb03g030050 I
Sb09g028990 Sorghum bicolor Sb09g028990 I
GBF1 Arabidopsis lyrata scaffold_700433.1 I
SELMODRAFT_135978 Selaginella moellendorffii SELMODRAFT_135978 I
Si001929m.g Setaria italica Si001929m.g I
Si022388m.g Setaria italica Si022388m.g I
Solyc01g095460.2 Solanum lycopersicum Solyc01g095460.2 I
Solyc02g062950.2 Solanum lycopersicum Solyc02g062950.2 I
Solyc02g085610.2 Solanum lycopersicum Solyc02g085610.2 I
Solyc05g050220.2 Solanum lycopersicum Solyc05g050220.2 I
TAF1_TOBAC Nicotiana tabacum TAF1_TOBAC D
TCM_000436 Theobroma cacao TCM_000436 I
TCM_005210 Theobroma cacao TCM_005210 I
Thhalv10001533m.g Eutrema salsugineum Thhalv10001533m.g I
Thhalv10016740m.g Eutrema salsugineum Thhalv10016740m.g I
Thhalv10025733m.g Eutrema salsugineum Thhalv10025733m.g I
Thhalv10028761m.g Eutrema salsugineum Thhalv10028761m.g I
Traes_1AL_F18EC96DF Triticum aestivum Traes_1AL_F18EC96DF I
Traes_1BL_C5FEAF06E Triticum aestivum Traes_1BL_C5FEAF06E I
Traes_1DL_23D036A85 Triticum aestivum Traes_1DL_23D036A85 I
TRIUR3_18341 Triticum urartu TRIUR3_18341 I
VIT_02s0025g01020 Vitis vinifera VIT_02s0025g01020 I
GBF1 Vitis vinifera VIT_04s0023g01360 I
VIT_15s0046g01440 Vitis vinifera VIT_15s0046g01440 I