ENSLACG00000005481 (Latimeria chalumnae)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSLACG00000005481 T034804_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OLIG2
M02812_2.00 		Homo sapiens
AMCATATGBY
RVCATATGKT		 SELEX
Jolma et al.(2013)
OLIG2_1 		0.914 1.000
OLIG2
M02813_2.00 		Homo sapiens
AMCATATGBY
RVCATATGKT		 SELEX
Jolma et al.(2013)
OLIG2_2 		0.914 1.000
OLIG2
M04223_2.00 		Homo sapiens
AACAKMTGTB
VACAKMTGTT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_HT-SELEX_1 		0.914 1.000
OLIG2
M04224_2.00 		Homo sapiens
AMCATATGKY
RMCATATGKT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_HT-SELEX_2 		0.914 1.000
OLIG2
M08742_2.00 		Homo sapiens
NDNVHNRVVRVCAGMTGK
MCAKCTGBYBBYNDBNHN		 Misc
Kulakovskiy et al.(2013)
OLIG2_HUMAN.H11MO.0.B 		0.914 1.000
Olig2
M08771_2.00 		Mus musculus
NDNVHNRVVRVCAGMTGK
MCAKCTGBYBBYNDBNHN		 Misc
Kulakovskiy et al.(2013)
OLIG2_MOUSE.H11MO.0.A 		0.914 1.000
Olig2
M09477_2.00 		Mus musculus
RVCAKMTGKH
DMCAKMTGBY		 Misc
Heinz et al.(2010)
Neuron-Olig2_GSE30882 		0.914 1.000
OLIG2
M04225_2.00 		Homo sapiens
AACAKMTGKB
VMCAKMTGTT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_Methyl-HT-SELEX_1 		0.914 1.000
OLIG2
M04226_2.00 		Homo sapiens
AMCATATGKT
AMCATATGKT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_Methyl-HT-SELEX_2 		0.914 1.000
Olig3
M01745_2.00 		Mus musculus
NWAHHATANNN
NNNTATDDTWN		 PBM
Weirauch et al.(2014)
pTH5164 		0.894 0.964
OLIG3
M02798_2.00 		Homo sapiens
AMCATATGBY
RVCATATGKT		 SELEX
Jolma et al.(2013)
OLIG3_1 		0.894 0.964
OLIG3
M04175_2.00 		Homo sapiens
RMCATATGSY
RSCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_FL_HT-SELEX 		0.894 0.964
OLIG3
M04171_2.00 		Homo sapiens
RMCATATGSY
RSCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_eDBD_HT-SELEX_1 		0.894 0.964
OLIG3
M04172_2.00 		Homo sapiens
AACAKMTGBT
AVCAKMTGTT		 SELEX
Yin et al.(2017)
OLIG3_eDBD_HT-SELEX_2 		0.894 0.964
OLIG3
M04176_2.00 		Homo sapiens
RMCATATGGY
RCCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_FL_Methyl-HT-SELEX 		0.894 0.964
OLIG3
M04173_2.00 		Homo sapiens
RMCATATGSY
RSCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_eDBD_Methyl-HT-SELEX_1 		0.894 0.964
OLIG3
M04174_2.00 		Homo sapiens
VACAKMTGKY
RMCAKMTGTB		 SELEX
Yin et al.(2017)
OLIG3_eDBD_Methyl-HT-SELEX_2 		0.894 0.964
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000006181 bHLH 82 136

Links

Other bHLH family TFs
Other Latimeria chalumnae TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00032p00241350 Amborella trichopoda AMTR_s00032p00241350 N 0.000
AT1G31040 Arabidopsis thaliana AT1G31040 N 0.000
Bo2g121040 Brassica oleracea Bo2g121040 N 0.000
Bo7g041160 Brassica oleracea Bo7g041160 N 0.000
Bostr.15697s0409 Boechera stricta Bostr.15697s0409 N 0.000
Bra014899 Brassica rapa Bra014899 N 0.000
Bra038403 Brassica rapa Bra038403 N 0.000
BRADI1G32050 Brachypodium distachyon BRADI1G32050 N 0.000
Cagra.1508s0089 Capsella grandiflora Cagra.1508s0089 N 0.000
Carubv10011663m.g Capsella rubella Carubv10011663m.g N 0.000
cassava11490.m1 Manihot esculenta cassava11490.m1 N 0.000
Cucsa.132770 Cucumis sativus Cucsa.132770 N 0.000
Eucgr.E00457 Eucalyptus grandis Eucgr.E00457 N 0.000
evm.TU.supercontig_30.133 Carica papaya evm.TU.supercontig_30.133 N 0.000
fgenesh1_pm.C_scaffold_1002523 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002523 N 0.000
GLYMA15G17040 Glycine max GLYMA15G17040 N 0.000
LjSGA_033751.1 Lotus japonicus LjSGA_033751.1 N 0.000
Lus10008031.g Linum usitatissimum Lus10008031.g N 0.000
Lus10008814.g Linum usitatissimum Lus10008814.g N 0.000
MLOC_21744 Hordeum vulgare MLOC_21744 N 0.000
MTR_4g116300 Medicago truncatula MTR_4g116300 N 0.000
Pavir.Ab00641 Panicum virgatum Pavir.Ab00641 N 0.000
Pavir.Da00255 Panicum virgatum Pavir.Da00255 N 0.000
PDK_20s1530701g001 Phoenix dactylifera PDK_20s1530701g001 N 0.000
Pm027672 Prunus mume Pm027672 N 0.000
POPTR_0018s12380 Populus trichocarpa POPTR_0018s12380 N 0.000
SapurV1A.0210s0200 Salix purpurea SapurV1A.0210s0200 N 0.000
Sb04g005680 Sorghum bicolor Sb04g005680 N 0.000
SELMODRAFT_425306 Selaginella moellendorffii SELMODRAFT_425306 N 0.000
SELMODRAFT_427354 Selaginella moellendorffii SELMODRAFT_427354 N 0.000
SELMODRAFT_4756 Selaginella moellendorffii SELMODRAFT_4756 N 0.000
SELMODRAFT_4832 Selaginella moellendorffii SELMODRAFT_4832 N 0.000
Thhalv10009789m.g Eutrema salsugineum Thhalv10009789m.g N 0.000
Traes_7DL_B446D4CC6 Triticum aestivum Traes_7DL_B446D4CC6 N 0.000
VIT_15s0048g00580 Vitis vinifera VIT_15s0048g00580 N 0.000