CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLOCG00000010962
(
Lepisosteus oculatus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSLOCG00000010962
T035030_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Bhlhe40
M00119_2.00
Mus musculus
DCACGTGMN
NKCACGTGH
PBM
Badis et al.(2009)
Bhlhb2_1274
0.914
1.000
Bhlhe40
M01738_2.00
Mus musculus
NCACRNBN
NVNYGTGN
PBM
Weirauch et al.(2014)
pTH4330
0.914
1.000
BHLHE40
M02788_2.00
Homo sapiens
NKCACGTGMH
DKCACGTGMN
SELEX
Jolma et al.(2013)
BHLHB2_1
0.914
1.000
Bhlhe40
M02817_2.00
Mus musculus
NKCACGTGMN
NKCACGTGMN
SELEX
Jolma et al.(2013)
Bhlhb2_1
0.914
1.000
Bhlhe40
M02818_2.00
Mus musculus
NKCACGTGMN
NKCACGTGMN
SELEX
Jolma et al.(2013)
Bhlhb2_2
0.914
1.000
BHLHE40
M04126_2.00
Homo sapiens
VTCACGTGAB
VTCACGTGAB
SELEX
Yin et al.(2017)
BHLHE40_eDBD_HT-SELEX
0.914
1.000
BHLHE40
M07798_2.00
Homo sapiens
DCACGTGMSN
NSKCACGTGH
ChIP-seq
Gerstein et al.(2012)
HepG2_BHLHE40_HudsonAlpha
0.914
1.000
BHLHE40
M08726_2.00
Homo sapiens
DDCACGTGMS
SKCACGTGHH
Misc
Kulakovskiy et al.(2013)
BHE40_HUMAN.H11MO.0.A
0.914
1.000
Bhlhe40
M08761_2.00
Mus musculus
DCACGTGMS
SKCACGTGH
Misc
Kulakovskiy et al.(2013)
BHE40_MOUSE.H11MO.0.A
0.914
1.000
BHLHE40
M09456_2.00
Homo sapiens
DCACGTGMNN
NNKCACGTGH
Misc
Heinz et al.(2010)
HepG2-BHLHE40_GSE31477
0.914
1.000
BHLHE40
M09842_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BHLHE40_03
0.914
1.000
BHLHE40
M09843_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC1_Q2
0.914
1.000
BHLHE40
M09844_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC1_Q3
0.914
1.000
BHLHE40
M09845_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STRA13_01
0.914
1.000
BHLHE40
M04127_2.00
Homo sapiens
RTCACGTGAY
RTCACGTGAY
SELEX
Yin et al.(2017)
BHLHE40_eDBD_Methyl-HT-SELEX
0.914
1.000
Bhlhe41
M01739_2.00
Mus musculus
NMNCGTGMN
NKCACGNKN
PBM
Weirauch et al.(2014)
pTH5060
0.914
0.981
BHLHE41
M02782_2.00
Homo sapiens
NKCACGTGMN
NKCACGTGMN
SELEX
Jolma et al.(2013)
BHLHB3_1
0.914
0.981
BHLHE41
M02783_2.00
Homo sapiens
RKCACGTGAY
RTCACGTGMY
SELEX
Jolma et al.(2013)
BHLHE41_1
0.914
0.981
BHLHE41
M04106_2.00
Homo sapiens
VTCACGTGAB
VTCACGTGAB
SELEX
Yin et al.(2017)
BHLHE41_eDBD_HT-SELEX
0.914
0.981
BHLHE41
M09833_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC2_Q2
0.914
0.981
BHLHE41
M09834_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC2_Q3
0.914
0.981
BHLHE41
M04107_2.00
Homo sapiens
RTCACGTGAY
RTCACGTGAY
SELEX
Yin et al.(2017)
BHLHE41_eDBD_Methyl-HT-SELEX
0.914
0.981
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLOCP00000013450
bHLH
51
105
KLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALT
Links
Other
bHLH
family TFs
Other
Lepisosteus oculatus
TFs
117 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_06448
Capronia coronata
A1O1_06448
N
0.000
A1O5_08664
Cladophialophora psammophila
A1O5_08664
N
0.000
A1O7_06479
Cladophialophora yegresii
A1O7_06479
N
0.000
ACRE_051010
Acremonium chrysogenum
ACRE_051010
N
0.000
BBA_03393
Beauveria bassiana
BBA_03393
N
0.000
Bcin01g08080
Botrytis cinerea
Bcin01g08080
N
0.000
CCM_00337
Cordyceps militaris
CCM_00337
N
0.000
CPUR_04232
Claviceps purpurea
CPUR_04232
N
0.000
estExt_Genewise1Plus.C_sca_18_chr2_1_02126
Nectria haematococca
estExt_Genewise1Plus.C_sca_18_chr2_1_02126
N
0.000
FFUJ_04132
Fusarium fujikuroi
FFUJ_04132
N
0.000
FGRRES_09277
Fusarium graminearum
FGRRES_09277
N
0.000
FOXG_14212
Fusarium oxysporum
FOXG_14212
N
0.000
FPSE_09669
Fusarium pseudograminearum
FPSE_09669
N
0.000
G647_06053
Cladophialophora carrionii
G647_06053
N
0.000
GMDG_02083
Pseudogymnoascus destructans
GMDG_02083
N
0.000
HMPREF1120_03961
Exophiala dermatitidis
HMPREF1120_03961
N
0.000
HMPREF1624_03632
Sporothrix schenckii
HMPREF1624_03632
N
0.000
MAC_08284
Metarhizium acridum
MAC_08284
N
0.000
MAJ_00301
Metarhizium majus
MAJ_00301
N
0.000
MAM_02763
Metarhizium album
MAM_02763
N
0.000
MANI_026709
Metarhizium anisopliae
MANI_026709
N
0.000
MBM_05804
Marssonina brunnea
MBM_05804
N
0.000
MBR_02363
Metarhizium brunneum
MBR_02363
N
0.000
MGU_00675
Metarhizium guizhouense
MGU_00675
N
0.000
NechaG66814
Fusarium solani
NechaG66814
N
0.000
OCS_01259
Ophiocordyceps sinensis
OCS_01259
N
0.000
PV04_06890
Capronia semiimmersa
PV04_06890
N
0.000
PV06_02579
Exophiala oligosperma
PV06_02579
N
0.000
PV07_03724
Cladophialophora immunda
PV07_03724
N
0.000
PV10_08689
Exophiala mesophila
PV10_08689
N
0.000
PV11_06703
Exophiala sideris
PV11_06703
N
0.000
S40285_06361
Stachybotrys chlorohalonata
S40285_06361
N
0.000
SPBR_01645
Sporothrix brasiliensis
SPBR_01645
N
0.000
SS1G_04655
Sclerotinia sclerotiorum
SS1G_04655
N
0.000
TRIATDRAFT_298410
Trichoderma atroviride
TRIATDRAFT_298410
N
0.000
TRIREDRAFT_65315
Trichoderma reesei
TRIREDRAFT_65315
N
0.000
TRIVIDRAFT_208681
Trichoderma virens
TRIVIDRAFT_208681
N
0.000
VHEMI03871
Torrubiella hemipterigena
VHEMI03871
N
0.000
X797_000370
Metarhizium robertsii
X797_000370
N
0.000
Z517_00960
Fonsecaea pedrosoi
Z517_00960
N
0.000
Z518_02769
Rhinocladiella mackenziei
Z518_02769
N
0.000
Z519_03993
Cladophialophora bantiana
Z519_03993
N
0.000