CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSMEUG00000010801
(
Macropus eugenii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSMEUG00000010801
T035142_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Bhlhe40
M00119_2.00
Mus musculus
DCACGTGMN
NKCACGTGH
PBM
Badis et al.(2009)
Bhlhb2_1274
0.914
1.000
Bhlhe40
M01738_2.00
Mus musculus
NCACRNBN
NVNYGTGN
PBM
Weirauch et al.(2014)
pTH4330
0.914
1.000
BHLHE40
M02788_2.00
Homo sapiens
NKCACGTGMH
DKCACGTGMN
SELEX
Jolma et al.(2013)
BHLHB2_1
0.914
1.000
Bhlhe40
M02817_2.00
Mus musculus
NKCACGTGMN
NKCACGTGMN
SELEX
Jolma et al.(2013)
Bhlhb2_1
0.914
1.000
Bhlhe40
M02818_2.00
Mus musculus
NKCACGTGMN
NKCACGTGMN
SELEX
Jolma et al.(2013)
Bhlhb2_2
0.914
1.000
BHLHE40
M04126_2.00
Homo sapiens
VTCACGTGAB
VTCACGTGAB
SELEX
Yin et al.(2017)
BHLHE40_eDBD_HT-SELEX
0.914
1.000
BHLHE40
M07798_2.00
Homo sapiens
DCACGTGMSN
NSKCACGTGH
ChIP-seq
Gerstein et al.(2012)
HepG2_BHLHE40_HudsonAlpha
0.914
1.000
BHLHE40
M08726_2.00
Homo sapiens
DDCACGTGMS
SKCACGTGHH
Misc
Kulakovskiy et al.(2013)
BHE40_HUMAN.H11MO.0.A
0.914
1.000
Bhlhe40
M08761_2.00
Mus musculus
DCACGTGMS
SKCACGTGH
Misc
Kulakovskiy et al.(2013)
BHE40_MOUSE.H11MO.0.A
0.914
1.000
BHLHE40
M09456_2.00
Homo sapiens
DCACGTGMNN
NNKCACGTGH
Misc
Heinz et al.(2010)
HepG2-BHLHE40_GSE31477
0.914
1.000
BHLHE40
M09842_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BHLHE40_03
0.914
1.000
BHLHE40
M09843_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC1_Q2
0.914
1.000
BHLHE40
M09844_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC1_Q3
0.914
1.000
BHLHE40
M09845_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STRA13_01
0.914
1.000
BHLHE40
M04127_2.00
Homo sapiens
RTCACGTGAY
RTCACGTGAY
SELEX
Yin et al.(2017)
BHLHE40_eDBD_Methyl-HT-SELEX
0.914
1.000
Bhlhe41
M01739_2.00
Mus musculus
NMNCGTGMN
NKCACGNKN
PBM
Weirauch et al.(2014)
pTH5060
0.914
0.981
BHLHE41
M02782_2.00
Homo sapiens
NKCACGTGMN
NKCACGTGMN
SELEX
Jolma et al.(2013)
BHLHB3_1
0.914
0.981
BHLHE41
M02783_2.00
Homo sapiens
RKCACGTGAY
RTCACGTGMY
SELEX
Jolma et al.(2013)
BHLHE41_1
0.914
0.981
BHLHE41
M04106_2.00
Homo sapiens
VTCACGTGAB
VTCACGTGAB
SELEX
Yin et al.(2017)
BHLHE41_eDBD_HT-SELEX
0.914
0.981
BHLHE41
M09833_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC2_Q2
0.914
0.981
BHLHE41
M09834_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC2_Q3
0.914
0.981
BHLHE41
M04107_2.00
Homo sapiens
RTCACGTGAY
RTCACGTGAY
SELEX
Yin et al.(2017)
BHLHE41_eDBD_Methyl-HT-SELEX
0.914
0.981
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMEUP00000009845
bHLH
53
107
KLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALT
Links
Other
bHLH
family TFs
Other
Macropus eugenii
TFs
117 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_003_00556
Aquilegia coerulea
Aquca_003_00556
I
0.000
Aquca_022_00003
Aquilegia coerulea
Aquca_022_00003
I
0.000
Aquca_024_00067
Aquilegia coerulea
Aquca_024_00067
N
0.000
BGIOSGA019118
Oryza indica
BGIOSGA019118
I
0.000
BRADI2G38380
Brachypodium distachyon
BRADI2G38380
N
0.000
cassava23775.valid.m1
Manihot esculenta
cassava23775.valid.m1
I
0.000
cassava36049.valid.m1
Manihot esculenta
cassava36049.valid.m1
I
0.000
evm.TU.supercontig_18.43
Carica papaya
evm.TU.supercontig_18.43
I
0.000
evm.TU.supercontig_538.1
Carica papaya
evm.TU.supercontig_538.1
I
0.000
gene21832-v1.0-hybrid
Fragaria vesca
gene21832-v1.0-hybrid
I
0.000
GLYMA11G12240
Glycine max
GLYMA11G12240
I
0.000
GLYMA12G04440
Glycine max
GLYMA12G04440
I
0.000
Gorai.007G122800
Gossypium raimondii
Gorai.007G122800
I
0.000
GSMUA_Achr10G12910_001
Musa acuminata
GSMUA_Achr10G12910_001
I
0.000
GSMUA_Achr11G05140_001
Musa acuminata
GSMUA_Achr11G05140_001
I
0.000
GSMUA_Achr11G20700_001
Musa acuminata
GSMUA_Achr11G20700_001
I
0.000
GSMUA_Achr2G06540_001
Musa acuminata
GSMUA_Achr2G06540_001
I
0.000
GSMUA_Achr8G29960_001
Musa acuminata
GSMUA_Achr8G29960_001
I
0.000
Lus10040428.g
Linum usitatissimum
Lus10040428.g
I
0.000
MDP0000205823
Malus domestica
MDP0000205823
I
0.000
mgf018581m
Mimulus guttatus
mgf018581m
I
0.000
MLOC_52125
Hordeum vulgare
MLOC_52125
N
0.000
MTR_1g087040
Medicago truncatula
MTR_1g087040
I
0.000
OB05G12090
Oryza brachyantha
OB05G12090
N
0.000
OBART05G02070
Oryza barthii
OBART05G02070
N
0.000
OGLUM05G02130
Oryza glumaepatula
OGLUM05G02130
N
0.000
OMERI05G02170
Oryza meridionalis
OMERI05G02170
N
0.000
ONIVA05G02010
Oryza nivara
ONIVA05G02010
I
0.000
OPUNC05G01750
Oryza punctata
OPUNC05G01750
N
0.000
ORGLA05G0020300
Oryza glaberrima
ORGLA05G0020300
N
0.000
ORUFI05G02170
Oryza rufipogon
ORUFI05G02170
N
0.000
OS05G0129300
Oryza sativa
OS05G0129300
N
0.000
Pavir.Ca00746
Panicum virgatum
Pavir.Ca00746
N
0.000
Pavir.J06041
Panicum virgatum
Pavir.J06041
N
0.000
PGSC0003DMG400030946
Solanum tuberosum
PGSC0003DMG400030946
I
0.000
PK07533.1
Cannabis sativa
PK07533.1
I
0.000
Si023562m.g
Setaria italica
Si023562m.g
N
0.000
Traes_1AS_94B6230FB1
Triticum aestivum
Traes_1AS_94B6230FB1
N
0.000
Traes_1BS_A44C97E0F
Triticum aestivum
Traes_1BS_A44C97E0F
N
0.000
Traes_1DS_62FDD3493
Triticum aestivum
Traes_1DS_62FDD3493
N
0.000
VIT_03s0038g04450
Vitis vinifera
VIT_03s0038g04450
I
0.000