CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSMGAG00000011091
(
Meleagris gallopavo
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSMGAG00000011091
T035204_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Myf5
M09463_2.00
Mus musculus
NRRCAGCTGY
RCAGCTGYYN
Misc
Heinz et al.(2010)
GM-Myf5_GSE24852
0.884
0.981
MYF5
M09821_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYF5_Q6
0.884
0.981
Myf6
M00120_2.00
Mus musculus
NCRNNTGNY
RNCANNYGN
PBM
Badis et al.(2009)
Myf6_3824
0.872
0.827
Myf6
M01742_2.00
Mus musculus
RACAGHTGH
DCADCTGTY
PBM
Weirauch et al.(2014)
pTH5099
0.872
0.827
MYF6
M02780_2.00
Homo sapiens
AACARCTGTY
RACAGYTGTT
SELEX
Jolma et al.(2013)
MYF6_1
0.872
0.827
MYF6
M04084_2.00
Homo sapiens
BRHCASSTGWCR
YGWCASSTGDYV
SELEX
Yin et al.(2017)
MYF6_eDBD_HT-SELEX_1
0.872
0.827
MYF6
M04085_2.00
Homo sapiens
NRACASSTGWYV
BRWCASSTGTYN
SELEX
Yin et al.(2017)
MYF6_eDBD_HT-SELEX_2
0.872
0.827
MYF6
M05831_2.00
Homo sapiens
BRACAKNTGNY
RNCANMTGTYV
SMiLE-seq
Isakova et al.(2017)
MYF6
0.872
0.827
MYF6
M08717_2.00
Homo sapiens
CASCTGC
GCAGSTG
Misc
Kulakovskiy et al.(2013)
MYF6_HUMAN.H11MO.0.C
0.872
0.827
Myf6
M08767_2.00
Mus musculus
CASCTGC
GCAGSTG
Misc
Kulakovskiy et al.(2013)
MYF6_MOUSE.H11MO.0.C
0.872
0.827
MYF6
M09820_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MRF4_Q3
0.872
0.827
MYF6
M04086_2.00
Homo sapiens
BRHCASSTGWCR
YGWCASSTGDYV
SELEX
Yin et al.(2017)
MYF6_eDBD_Methyl-HT-SELEX_1
0.872
0.827
MYF6
M04087_2.00
Homo sapiens
BAACASSTGWYV
BRWCASSTGTTV
SELEX
Yin et al.(2017)
MYF6_eDBD_Methyl-HT-SELEX_2
0.872
0.827
MYOG
M04098_2.00
Homo sapiens
BRACAGCTGWCR
YGWCAGCTGTYV
SELEX
Yin et al.(2017)
MYOG_eDBD_HT-SELEX_1
0.842
0.788
MYOG
M04099_2.00
Homo sapiens
NAACAGCTGTYN
NRACAGCTGTTN
SELEX
Yin et al.(2017)
MYOG_eDBD_HT-SELEX_2
0.842
0.788
MYOG
M04102_2.00
Homo sapiens
NRACARCTGWCR
YGWCAGYTGTYN
SELEX
Yin et al.(2017)
MYOG_FL_HT-SELEX_1
0.842
0.788
MYOG
M04103_2.00
Homo sapiens
NAACARYTGTYN
NRACARYTGTTN
SELEX
Yin et al.(2017)
MYOG_FL_HT-SELEX_2
0.842
0.788
Myog
M08061_2.00
Mus musculus
RRCAGCTGVNN
NNBCAGCTGYY
ChIP-seq
Mathelier et al.(2014)
MA0500.1
0.842
0.788
MYOG
M08721_2.00
Homo sapiens
BHVCAGCTGYYNB
VNRRCAGCTGBDV
Misc
Kulakovskiy et al.(2013)
MYOG_HUMAN.H11MO.0.B
0.842
0.788
Myog
M08755_2.00
Mus musculus
BHVCAGCTGYYNB
VNRRCAGCTGBDV
Misc
Kulakovskiy et al.(2013)
MYOG_MOUSE.H11MO.0.A
0.842
0.788
Myog
M09469_2.00
Mus musculus
RACAGCTG
CAGCTGTY
Misc
Heinz et al.(2010)
C2C12-MyoG_GSE36024
0.842
0.788
MYOG
M09829_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYOGENIN_Q6_01
0.842
0.788
MYOG
M09830_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYOGENIN_Q6
0.842
0.788
MYOG
M04100_2.00
Homo sapiens
BRACAGCTGTCR
YGACAGCTGTYV
SELEX
Yin et al.(2017)
MYOG_eDBD_Methyl-HT-SELEX_1
0.842
0.788
MYOG
M04101_2.00
Homo sapiens
BAACAGCTGTYV
BRACAGCTGTTV
SELEX
Yin et al.(2017)
MYOG_eDBD_Methyl-HT-SELEX_2
0.842
0.788
MYOG
M04104_2.00
Homo sapiens
BRACAGCTGTCR
YGACAGCTGTYV
SELEX
Yin et al.(2017)
MYOG_FL_Methyl-HT-SELEX_1
0.842
0.788
MYOG
M04105_2.00
Homo sapiens
NAACAGCTGTYN
NRACAGCTGTTN
SELEX
Yin et al.(2017)
MYOG_FL_Methyl-HT-SELEX_2
0.842
0.788
MYOD1
M04116_2.00
Homo sapiens
BAACASSTGNYV
BRNCASSTGTTV
SELEX
Yin et al.(2017)
MYOD1_eDBD_HT-SELEX_1
0.840
0.904
MYOD1
M04117_2.00
Homo sapiens
BRVCASMTGDCG
CGHCAKSTGBYV
SELEX
Yin et al.(2017)
MYOD1_eDBD_HT-SELEX_2
0.840
0.904
MYOD1
M04120_2.00
Homo sapiens
NAACASSTGNYV
BRNCASSTGTTN
SELEX
Yin et al.(2017)
MYOD1_FL_HT-SELEX_1
0.840
0.904
MYOD1
M04121_2.00
Homo sapiens
BRMCASCTGDCR
YGHCAGSTGKYV
SELEX
Yin et al.(2017)
MYOD1_FL_HT-SELEX_2
0.840
0.904
Myod1
M08060_2.00
Mus musculus
NVNRRCAGSTGBN
NVCASCTGYYNBN
ChIP-seq
Mathelier et al.(2014)
MA0499.1
0.840
0.904
MYOD1
M08724_2.00
Homo sapiens
NVNNRNRRCAGCTGN
NCAGCTGYYNYNNBN
Misc
Kulakovskiy et al.(2013)
MYOD1_HUMAN.H11MO.0.A
0.840
0.904
Myod1
M08745_2.00
Mus musculus
NVNRRNRRCAGSTGB
VCASCTGYYNYYNBN
Misc
Kulakovskiy et al.(2013)
MYOD1_MOUSE.H11MO.0.A
0.840
0.904
MYOD1
M09838_2.00
Homo sapiens
HRVCACCTGHBB
VVDCAGGTGBYD
Transfac
Matys et al.(2006)
V$MYOD_01
0.840
0.904
MYOD1
M09839_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MYOD_Q6_02
0.840
0.904
MYOD1
M09840_2.00
Homo sapiens
NVCABCTGNY
RNCAGVTGBN
Transfac
Matys et al.(2006)
V$MYOD_Q6
0.840
0.904
MYOD1
M04118_2.00
Homo sapiens
BAACANVTGTYV
BRACABNTGTTV
SELEX
Yin et al.(2017)
MYOD1_eDBD_Methyl-HT-SELEX_1
0.840
0.904
MYOD1
M04119_2.00
Homo sapiens
BRRCASSTGDCR
YGHCASSTGYYV
SELEX
Yin et al.(2017)
MYOD1_eDBD_Methyl-HT-SELEX_2
0.840
0.904
MYOD1
M04122_2.00
Homo sapiens
NAMCASSTGBYV
BRVCASSTGKTN
SELEX
Yin et al.(2017)
MYOD1_FL_Methyl-HT-SELEX_1
0.840
0.904
MYOD1
M04123_2.00
Homo sapiens
BRMCASVTGNCR
YGNCABSTGKYV
SELEX
Yin et al.(2017)
MYOD1_FL_Methyl-HT-SELEX_2
0.840
0.904
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMGAP00000011572
bHLH
94
145
RRKAATMRERRRLKKVNQAFETLKRCTTANPNQRLPKVEILRNAIRYIESLQ
Links
Other
bHLH
family TFs
Other
Meleagris gallopavo
TFs
301 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AtMYB82
Arabidopsis lyrata
Al_scaffold_0008_1642
I
AMTR_s00024p00224180
Amborella trichopoda
AMTR_s00024p00224180
I
AMTR_s00024p00224470
Amborella trichopoda
AMTR_s00024p00224470
I
AMTR_s00024p00224850
Amborella trichopoda
AMTR_s00024p00224850
I
AMTR_s00068p00092800
Amborella trichopoda
AMTR_s00068p00092800
I
AMTR_s00068p00097220
Amborella trichopoda
AMTR_s00068p00097220
I
AMTR_s00068p00099460
Amborella trichopoda
AMTR_s00068p00099460
I
Aquca_009_00493
Aquilegia coerulea
Aquca_009_00493
I
TT2
Arabidopsis thaliana
AT5G35550
I
MYB82
Arabidopsis thaliana
AT5G52600
I
Bo2g047590
Brassica oleracea
Bo2g047590
I
Bo3g023140
Brassica oleracea
Bo3g023140
I
Bostr.29044s0068
Boechera stricta
Bostr.29044s0068
I
Bra022602
Brassica rapa
Bra022602
I
Bra029113
Brassica rapa
Bra029113
I
Cagra.0084s0008
Capsella grandiflora
Cagra.0084s0008
I
Cagra.5428s0005
Capsella grandiflora
Cagra.5428s0005
I
Carubv10006684m.g
Capsella rubella
Carubv10006684m.g
I
Carubv10028642m.g
Capsella rubella
Carubv10028642m.g
I
cassava28702.m1
Manihot esculenta
cassava28702.m1
I
cassava29820.valid.m1
Manihot esculenta
cassava29820.valid.m1
I
cassava32672.m1
Manihot esculenta
cassava32672.m1
I
cassava36364.valid.m1
Manihot esculenta
cassava36364.valid.m1
I
cassava36365.valid.m1
Manihot esculenta
cassava36365.valid.m1
I
cassava6348.valid.m1
Manihot esculenta
cassava6348.valid.m1
I
cassava7672.valid.m1
Manihot esculenta
cassava7672.valid.m1
I
cassava9274.m1
Manihot esculenta
cassava9274.m1
I
Ca_01329
Cicer arietinum
Ca_01329
I
Ca_17627
Cicer arietinum
Ca_17627
I
chr1.CM0105.50.nd
Lotus japonicus
chr1.CM0105.50.nd
I
Ciclev10015648m.g
Citrus clementina
Ciclev10015648m.g
I
Ciclev10021571m.g
Citrus clementina
Ciclev10021571m.g
I
Cla016951
Citrullus lanatus
Cla016951
I
Cucsa.132300
Cucumis sativus
Cucsa.132300
N
Eucgr.A02110
Eucalyptus grandis
Eucgr.A02110
I
Eucgr.B00866
Eucalyptus grandis
Eucgr.B00866
I
Eucgr.B03606
Eucalyptus grandis
Eucgr.B03606
I
Eucgr.C00721
Eucalyptus grandis
Eucgr.C00721
I
Eucgr.C00724
Eucalyptus grandis
Eucgr.C00724
I
Eucgr.C00826
Eucalyptus grandis
Eucgr.C00826
I
Eucgr.C01374
Eucalyptus grandis
Eucgr.C01374
I
Eucgr.C02096
Eucalyptus grandis
Eucgr.C02096
I
Eucgr.C03151
Eucalyptus grandis
Eucgr.C03151
I
Eucgr.D02390
Eucalyptus grandis
Eucgr.D02390
I
Eucgr.E01031
Eucalyptus grandis
Eucgr.E01031
I
Eucgr.K01504
Eucalyptus grandis
Eucgr.K01504
I
evm.TU.supercontig_119.55
Carica papaya
evm.TU.supercontig_119.55
I
evm.TU.supercontig_46.32
Carica papaya
evm.TU.supercontig_46.32
I
F775_26191
Aegilops tauschii
F775_26191
I
TT2
Arabidopsis lyrata
fgenesh2_kg.7__3049__AT5G35550.1
I
gene15390-v1.0-hybrid
Fragaria vesca
gene15390-v1.0-hybrid
I
gene18691-v1.0-hybrid
Fragaria vesca
gene18691-v1.0-hybrid
I
gene31098-v1.0-hybrid
Fragaria vesca
gene31098-v1.0-hybrid
I
GLYMA07G05960
Glycine max
GLYMA07G05960
I
GLYMA10G35050
Glycine max
GLYMA10G35050
I
GLYMA13G09980
Glycine max
GLYMA13G09980
I
GLYMA13G16890
Glycine max
GLYMA13G16890
I
GLYMA14G24500
Glycine max
GLYMA14G24500
I
GLYMA16G02570
Glycine max
GLYMA16G02570
I
GLYMA17G05831
Glycine max
GLYMA17G05831
I
GLYMA19G44660
Glycine max
GLYMA19G44660
I
GLYMA20G32500
Glycine max
GLYMA20G32500
I
GLYMA20G32510
Glycine max
GLYMA20G32510
I
Gorai.001G044000
Gossypium raimondii
Gorai.001G044000
I
Gorai.004G150800
Gossypium raimondii
Gorai.004G150800
I
Gorai.004G276500
Gossypium raimondii
Gorai.004G276500
N
Gorai.007G260600
Gossypium raimondii
Gorai.007G260600
I
Gorai.007G350500
Gossypium raimondii
Gorai.007G350500
I
Gorai.008G126700
Gossypium raimondii
Gorai.008G126700
I
Gorai.010G087200
Gossypium raimondii
Gorai.010G087200
I
GSMUA_Achr3G07940_001
Musa acuminata
GSMUA_Achr3G07940_001
I
GSMUA_Achr3G07950_001
Musa acuminata
GSMUA_Achr3G07950_001
I
GSMUA_Achr6G04400_001
Musa acuminata
GSMUA_Achr6G04400_001
I
GSMUA_Achr8G22690_001
Musa acuminata
GSMUA_Achr8G22690_001
I
LjSGA_023691.1
Lotus japonicus
LjSGA_023691.1
I
Lus10013762.g
Linum usitatissimum
Lus10013762.g
I
Lus10039173.g
Linum usitatissimum
Lus10039173.g
I
MDP0000167314
Malus domestica
MDP0000167314
I
MDP0000264051
Malus domestica
MDP0000264051
I
MDP0000655330
Malus domestica
MDP0000655330
I
MDP0000723614
Malus domestica
MDP0000723614
I
MDP0000791870
Malus domestica
MDP0000791870
I
MDP0000915330
Malus domestica
MDP0000915330
I
mgf023205m
Mimulus guttatus
mgf023205m
I
MTR_4g125520
Medicago truncatula
MTR_4g125520
I
MTR_7g117730
Medicago truncatula
MTR_7g117730
I
orange1.1g036215m.g
Citrus sinensis
orange1.1g036215m.g
I
orange1.1g040726m.g
Citrus sinensis
orange1.1g040726m.g
I
orange1.1g040841m.g
Citrus sinensis
orange1.1g040841m.g
I
PDK_20s1310471g002
Phoenix dactylifera
PDK_20s1310471g002
I
PDK_20s1554342g001
Phoenix dactylifera
PDK_20s1554342g001
I
PDK_20s1716541g001
Phoenix dactylifera
PDK_20s1716541g001
I
PDK_20s1918041g001
Phoenix dactylifera
PDK_20s1918041g001
I
PGSC0003DMG400030913
Solanum tuberosum
PGSC0003DMG400030913
I
PK01088.1
Cannabis sativa
PK01088.1
I
PK14784.1
Cannabis sativa
PK14784.1
I
PK16315.1
Cannabis sativa
PK16315.1
I
Pm005572
Prunus mume
Pm005572
I
Pm018338
Prunus mume
Pm018338
I
Pm027047
Prunus mume
Pm027047
I
Pm027586
Prunus mume
Pm027586
I
Pm029489
Prunus mume
Pm029489
I
POPTR_0002s17460
Populus trichocarpa
POPTR_0002s17460
I
POPTR_0003s21120
Populus trichocarpa
POPTR_0003s21120
I
POPTR_0006s06530
Populus trichocarpa
POPTR_0006s06530
N
POPTR_0006s23810
Populus trichocarpa
POPTR_0006s23810
I
POPTR_0013s05300
Populus trichocarpa
POPTR_0013s05300
I
POPTR_0013s05310
Populus trichocarpa
POPTR_0013s05310
I
POPTR_0014s09630
Populus trichocarpa
POPTR_0014s09630
I
POPTR_0018s05530
Populus trichocarpa
POPTR_0018s05530
I
POPTR_0018s05740
Populus trichocarpa
POPTR_0018s05740
I
POPTR_0018s05750
Populus trichocarpa
POPTR_0018s05750
I
POPTR_0018s12780
Populus trichocarpa
POPTR_0018s12780
N
PRUPE_ppa006730mg
Prunus persica
PRUPE_ppa006730mg
I
PRUPE_ppa009439mg
Prunus persica
PRUPE_ppa009439mg
I
PRUPE_ppa016532mg
Prunus persica
PRUPE_ppa016532mg
I
PRUPE_ppa019380mg
Prunus persica
PRUPE_ppa019380mg
I
PRUPE_ppa023768mg
Prunus persica
PRUPE_ppa023768mg
I
PRUPE_ppa024074mg
Prunus persica
PRUPE_ppa024074mg
I
Q2TCH0_PETHY
Petunia x hybrida
Q2TCH0_PETHY
D
SapurV1A.0003s0900
Salix purpurea
SapurV1A.0003s0900
I
SapurV1A.0013s0160
Salix purpurea
SapurV1A.0013s0160
I
SapurV1A.0034s0330
Salix purpurea
SapurV1A.0034s0330
N
SapurV1A.0081s0400
Salix purpurea
SapurV1A.0081s0400
I
SapurV1A.0197s0090
Salix purpurea
SapurV1A.0197s0090
N
SapurV1A.0553s0100
Salix purpurea
SapurV1A.0553s0100
I
SapurV1A.0553s0110
Salix purpurea
SapurV1A.0553s0110
I
SapurV1A.0710s0050
Salix purpurea
SapurV1A.0710s0050
I
SapurV1A.1276s0050
Salix purpurea
SapurV1A.1276s0050
I
SapurV1A.1276s0060
Salix purpurea
SapurV1A.1276s0060
I
SapurV1A.2191s0020
Salix purpurea
SapurV1A.2191s0020
N
Sb01g032770
Sorghum bicolor
Sb01g032770
I
SELMODRAFT_127220
Selaginella moellendorffii
SELMODRAFT_127220
I
SELMODRAFT_98669
Selaginella moellendorffii
SELMODRAFT_98669
I
Si038905m.g
Setaria italica
Si038905m.g
I
Solyc01g005660.1
Solanum lycopersicum
Solyc01g005660.1
I
Solyc07g008010.2
Solanum lycopersicum
Solyc07g008010.2
I
Solyc12g049300.1
Solanum lycopersicum
Solyc12g049300.1
I
TCM_004509
Theobroma cacao
TCM_004509
I
TCM_024180
Theobroma cacao
TCM_024180
I
TCM_025910
Theobroma cacao
TCM_025910
I
TCM_037376
Theobroma cacao
TCM_037376
I
TCM_037377
Theobroma cacao
TCM_037377
I
TCM_037379
Theobroma cacao
TCM_037379
I
TCM_037555
Theobroma cacao
TCM_037555
I
TCM_038131
Theobroma cacao
TCM_038131
I
Thhalv10014754m.g
Eutrema salsugineum
Thhalv10014754m.g
I
VIT_04s0008g01800
Vitis vinifera
VIT_04s0008g01800
I
VIT_06s0004g00570
Vitis vinifera
VIT_06s0004g00570
I
VIT_08s0007g07230
Vitis vinifera
VIT_08s0007g07230
I
VIT_09s0002g01410
Vitis vinifera
VIT_09s0002g01410
I
VIT_11s0016g01310
Vitis vinifera
VIT_11s0016g01310
I
VIT_11s0016g01320
Vitis vinifera
VIT_11s0016g01320
I
VIT_11s0016g05660
Vitis vinifera
VIT_11s0016g05660
N
VIT_11s0016g05690
Vitis vinifera
VIT_11s0016g05690
N
VIT_13s0084g00530
Vitis vinifera
VIT_13s0084g00530
I