CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

MITF *(Macaca mulatta)* bHLH
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00010 (HLH)	IPR001092	ENSMMUG00000002100	T035385_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Mitf M01741_2.00	Mus musculus	NCDCGTGAYN	NRTCACGHGN	PBM Weirauch et al.(2014) pTH5465	0.914	1.000
MITF M08058_2.00	Homo sapiens	NNNDRTCACGTGAYHNNN	NNNDRTCACGTGAYHNNN	ChIP-seq Mathelier et al.(2014) MA0620.2	0.914	1.000
MITF M08740_2.00	Homo sapiens	YCAYGTGACH	DGTCACRTGR	Misc Kulakovskiy et al.(2013) MITF_HUMAN.H11MO.0.A	0.914	1.000
Mitf M08765_2.00	Mus musculus	BCHYGTGACY	RGTCACRDGV	Misc Kulakovskiy et al.(2013) MITF_MOUSE.H11MO.0.A	0.914	1.000
Mitf M09475_2.00	Mus musculus	GTCACRWGVB	VBCWYGTGAC	Misc Heinz et al.(2010) MastCells-MITF_GSE48085	0.914	1.000
MITF M09880_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MITF_Q4	0.914	1.000
MITF M09881_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MITF_Q6	0.914	1.000
Tfe3 M01715_2.00	Mus musculus	NCDCRTGAYN	NRTCAYGHGN	PBM Weirauch et al.(2014) pTH5057	0.914	0.981
Tfe3 M05833_2.00	Mus musculus	CACGTGAY	RTCACGTG	SMiLE-seq Isakova et al.(2017) TFE3	0.914	0.981
Tfe3 M08743_2.00	Mus musculus	TCACGTGACH	DGTCACGTGA	Misc Kulakovskiy et al.(2013) TFE3_MOUSE.H11MO.0.A	0.914	0.981
Tfe3 M09884_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TFEA_01	0.914	0.981
TFE3 M02773_2.00	Homo sapiens	VNCACGTGMY	RKCACGTGNB	SELEX Jolma et al.(2013) TFE3_1	0.871	0.963
TFE3 M04058_2.00	Homo sapiens	YVCACGTGAYN	NRTCACGTGBR	SELEX Yin et al.(2017) TFE3_eDBD_HT-SELEX	0.871	0.963
TFE3 M08709_2.00	Homo sapiens	TCACGTGACH	DGTCACGTGA	Misc Kulakovskiy et al.(2013) TFE3_HUMAN.H11MO.0.B	0.871	0.963
TFE3 M09790_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$TFEA_Q6	0.871	0.963
TFE3 M04059_2.00	Homo sapiens	NRTCACATGBB	VVCATGTGAYN	SELEX Yin et al.(2017) TFE3_eDBD_Methyl-HT-SELEX	0.871	0.963
Tfec M00755_2.00	Mus musculus	NNCACGTGNN	NNCACGTGNN	PBM Weirauch et al.(2013) pTH2885	0.870	0.926
Tfec M01736_2.00	Mus musculus	NCNCRTGVYN	NRBCAYGNGN	PBM Weirauch et al.(2014) pTH5065	0.870	0.926
TFEC M02778_2.00	Homo sapiens	RNCACRTGAB	VTCAYGTGNY	SELEX Jolma et al.(2013) TFEC_1	0.870	0.907
TFEC M04078_2.00	Homo sapiens	NVCACGTGACN	NGTCACGTGBN	SELEX Yin et al.(2017) TFEC_eDBD_HT-SELEX	0.870	0.907
TFEC M04079_2.00	Homo sapiens	VNCATGTGAYN	NRTCACATGNB	SELEX Yin et al.(2017) TFEC_eDBD_Methyl-HT-SELEX	0.870	0.907
Tfeb M01728_2.00	Mus musculus	CWCGTGAY	RTCACGWG	PBM Weirauch et al.(2014) pTH5072	0.855	0.889
TFEB M02781_2.00	Homo sapiens	RNCACGTGAY	RTCACGTGNY	SELEX Jolma et al.(2013) TFEB_1	0.855	0.889
TFEB M02727_2.00	Homo sapiens	RTCACGTGAY	RTCACGTGAY	SELEX Jolma et al.(2010) TFEB_dimer	0.855	0.889
TFEB M04088_2.00	Homo sapiens	YVCACGTGAYN	NRTCACGTGBR	SELEX Yin et al.(2017) TFEB_eDBD_HT-SELEX	0.855	0.889
TFEB M08718_2.00	Homo sapiens	CACGTGAYY	RRTCACGTG	Misc Kulakovskiy et al.(2013) TFEB_HUMAN.H11MO.0.C	0.855	0.889
Tfeb M08753_2.00	Mus musculus	CACGTGAYY	RRTCACGTG	Misc Kulakovskiy et al.(2013) TFEB_MOUSE.H11MO.0.C	0.855	0.889
TFEB M04089_2.00	Homo sapiens	VNCATGTGAYN	NRTCACATGNB	SELEX Yin et al.(2017) TFEB_eDBD_Methyl-HT-SELEX	0.855	0.889
For this family, TFs with SR scores > 0.838* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSMMUP00000002800	bHLH	312	365	KKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQ
ENSMMUP00000002801	bHLH	296	349	KKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQ
ENSMMUP00000002802	bHLH	205	258	KKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQ
ENSMMUP00000002805	bHLH	311	364	KKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQ

Links
Other bHLH family TFs
Other *Macaca mulatta* TFs

243 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
Aan_R007949	Calypte anna	Aan_R007949	N	0.000
Afo_R006305	Aptenodytes forsteri	Afo_R006305	N	0.000
Brh_R011091	Buceros rhinoceros	Brh_R011091	N	0.000
Cmyd_10013756	Chelonia mydas	Cmyd_10013756	N	0.000
ARNTL2	Anolis carolinensis	ENSACAG00000012446	N	0.000
ENSAMEG00000011610	Ailuropoda melanoleuca	ENSAMEG00000011610	N	0.000
ENSAMXG00000020233	Astyanax mexicanus	ENSAMXG00000020233	I	0.000
ENSAPLG00000008758	Anas platyrhynchos	ENSAPLG00000008758	N	0.000
ARNTL2	Bos taurus	ENSBTAG00000011804	N	0.000
ARNTL2	Canis familiaris	ENSCAFG00000011089	N	0.000
ENSCSAG00000007636	Chlorocebus sabaeus	ENSCSAG00000007636	N	0.000
arntl2	Danio rerio	ENSDARG00000041381	I	0.000
ENSFALG00000003942	Ficedula albicollis	ENSFALG00000003942	N	0.000
ARNTL2	Felis catus	ENSFCAG00000000386	N	0.000
ARNTL2	Homo sapiens	ENSG00000029153	N	0.000
ARNTL2	Gallus gallus	ENSGALG00000014096	N	0.000
ENSLACG00000009646	Latimeria chalumnae	ENSLACG00000009646	N	0.000
ENSLOCG00000015224	Lepisosteus oculatus	ENSLOCG00000015224	N	0.000
ENSMEUG00000007045	Macropus eugenii	ENSMEUG00000007045	N	0.000
ARNTL2	Meleagris gallopavo	ENSMGAG00000013735	N	0.000
ARNTL2	Myotis lucifugus	ENSMLUG00000003256	N	0.000
ARNTL2	Macaca mulatta	ENSMMUG00000023249	N	0.000
ENSMPUG00000010512	Mustela putorius furo	ENSMPUG00000010512	N	0.000
ENSNLEG00000005463	Nomascus leucogenys	ENSNLEG00000005463	N	0.000
ENSOARG00000019779	Ovis aries	ENSOARG00000019779	N	0.000
ARNTL2	Otolemur garnettii	ENSOGAG00000011668	N	0.000
ENSONIG00000014665	Oreochromis niloticus	ENSONIG00000014665	I	0.000
arntl2	Oryzias latipes	ENSORLG00000010946	I	0.000
ENSP00000266503	Macaca fascicularis	ENSP00000266503	N	0.000
ENSP00000266503-D1	Bos grunniens	ENSP00000266503-D1	N	0.000
ENSPANG00000004474	Papio anubis	ENSPANG00000004474	N	0.000
ARNTL2	Procavia capensis	ENSPCAG00000008486	N	0.000
ENSPFOG00000016287	Poecilia formosa	ENSPFOG00000016287	I	0.000
ENSPPYG00000004380	Pongo abelii	ENSPPYG00000004380	N	0.000
ENSPSIG00000009416	Pelodiscus sinensis	ENSPSIG00000009416	N	0.000
ARNTL2	Pan troglodytes	ENSPTRG00000004788	N	0.000
ARNTL2	Pteropus vampyrus	ENSPVAG00000013771	N	0.000
ARNTL2	Sus scrofa	ENSSSCG00000000551	N	0.000
ENSSTOG00000001344	Ictidomys tridecemlineatus	ENSSTOG00000001344	N	0.000
ENSTGUG00000012163	Taeniopygia guttata	ENSTGUG00000012163	N	0.000
arntl2	Tetraodon nigroviridis	ENSTNIG00000012142	I	0.000
arntl2	Takifugu rubripes	ENSTRUG00000007832	I	0.000
ENSTSYG00000005541	Tarsius syrichta	ENSTSYG00000005541	N	0.000
ENSXMAG00000001482	Xiphophorus maculatus	ENSXMAG00000001482	I	0.000
Gfo_R015185	Geospiza fortis	Gfo_R015185	N	0.000
Myotis_brandtii_ARNTL2_10027352	Myotis brandtii	Myotis_brandtii_ARNTL2_10027352	N	0.000
Ogr07520	Ophisaurus gracilis	Ogr07520	N	0.000
Pvit_19389	Pogona vitticeps	Pvit_19389	N	0.000
Tal_R011603	Tyto alba	Tal_R011603	N	0.000

MITF (Macaca mulatta) bHLH

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

243 Related TFs

MITF **(Macaca mulatta)
bHLH**