PTF1A (Otolemur garnettii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSOGAG00000024685 T036140_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PTF1A
M04156_2.00 		Homo sapiens
AACAGCTGACRB
VYGTCAGCTGTT		 SELEX
Yin et al.(2017)
PTF1A_eDBD_HT-SELEX 		0.914 1.000
PTF1A
M08736_2.00 		Homo sapiens
SCAGCTGBYNBNNYYYHN
NDRRRNNVNRVCAGCTGS		 Misc
Kulakovskiy et al.(2013)
PTF1A_HUMAN.H11MO.0.B 		0.914 1.000
Ptf1a
M08757_2.00 		Mus musculus
SCAGCTGBYNBNNYYYHN
NDRRRNNVNRVCAGCTGS		 Misc
Kulakovskiy et al.(2013)
PTF1A_MOUSE.H11MO.0.A 		0.914 1.000
Ptf1a
M09470_2.00 		Mus musculus
NVVCASSTGB
VCASSTGBBN		 Misc
Heinz et al.(2010)
Panc1-Ptf1a_GSE47459 		0.914 1.000
PTF1A
M04157_2.00 		Homo sapiens
AMCAGCTGACRB
VYGTCAGCTGKT		 SELEX
Yin et al.(2017)
PTF1A_eDBD_Methyl-HT-SELEX 		0.914 1.000
Fer1
M03620_2.00 		Drosophila melanogaster
VDCASCTGHY
RDCAGSTGHB		 SELEX
Nitta et al.(2015)
Fer1_1 		0.894 0.865
Fer1
M05990_2.00 		Drosophila melanogaster
HVCASMTGWCV
BGWCAKSTGBD		 B1H
Zhu et al.(2011)
Fer1_da_SANGER_10_FBgn0037475 		0.894 0.865
Fer1
M05991_2.00 		Drosophila melanogaster
WYRHCAGCTGACG
CGTCAGCTGDYRW		 B1H
Zhu et al.(2011)
Fer1_SANGER_5_FBgn0037475 		0.894 0.865
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000022271 bHLH 162 214

Links

Other bHLH family TFs
Other Otolemur garnettii TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL011092 Aedes aegypti AAEL011092 N
AALB003225 Anopheles albimanus AALB003225 N
Aan_R003738 Calypte anna Aan_R003738 N
AARA006109 Anopheles arabiensis AARA006109 N
AATE009040 Anopheles atroparvus AATE009040 N
ACEP21606 Atta cephalotes ACEP21606 N
ACHR007377 Anopheles christyi ACHR007377 N
ACOM038290 Anopheles coluzzii ACOM038290 N
ACUA025224 Anopheles culicifacies ACUA025224 N
ADAC004659 Anopheles darlingi ADAC004659 N
ADIR009258 Anopheles dirus ADIR009258 N
AEPI000432 Anopheles epiroticus AEPI000432 N
AFAF009884 Anopheles farauti AFAF009884 N
Afo_R005441 Aptenodytes forsteri Afo_R005441 N
AFUN008496 Anopheles funestus AFUN008496 N
AGAP004854 Anopheles gambiae AGAP004854 N
AMAM014474 Anopheles maculatus AMAM014474 N
AMEC004492 Anopheles melas AMEC004492 N
AMEM014063 Anopheles merus AMEM014063 N
AMIN011637 Anopheles minimus AMIN011637 N
Aqu1.222503 Amphimedon queenslandica Aqu1.222503 N
AQUA000338 Anopheles quadriannulatus AQUA000338 N
ASTEI05939 Anopheles stephensi ASTEI05939 N
BATDEDRAFT_85702 Batrachochytrium dendrobatidis BATDEDRAFT_85702 N
BGIBMGA004558 Bombyx mori BGIBMGA004558 N
Brh_R004837 Buceros rhinoceros Brh_R004837 N
CapteG147496 Capitella teleta CapteG147496 N
Cflo_12071--XP_001122635.1_APIME Camponotus floridanus Cflo_12071--XP_001122635.1_APIME N
CGI_10007771 Crassostrea gigas CGI_10007771 N
CLEC002198 Cimex lectularius CLEC002198 N
CLEC007074 Cimex lectularius CLEC007074 N
Cmyd_10020716 Chelonia mydas Cmyd_10020716 N
CPIJ009184 Culex quinquefasciatus CPIJ009184 N
CpipJ_CPIJ009184 Culex pipiens CpipJ_CPIJ009184 N
KDM5B Anolis carolinensis ENSACAG00000005107 N
ENSAMEG00000012088 Ailuropoda melanoleuca ENSAMEG00000012088 N
ENSAMXG00000018648 Astyanax mexicanus ENSAMXG00000018648 N
ENSAPLG00000007715 Anas platyrhynchos ENSAPLG00000007715 N
KDM5B Bos taurus ENSBTAG00000006175 N
KDM5B Canis familiaris ENSCAFG00000010452 N
KDM5B Choloepus hoffmanni ENSCHOG00000012197 N
KDM5B Callithrix jacchus ENSCJAG00000006050 N
KDM5B Cavia porcellus ENSCPOG00000010644 N
ENSCSAG00000014155 Chlorocebus sabaeus ENSCSAG00000014155 N
kdm5bb Danio rerio ENSDARG00000003098 N
kdm5ba Danio rerio ENSDARG00000057093 N
KDM5B Dasypus novemcinctus ENSDNOG00000003205 N
KDM5B Equus caballus ENSECAG00000014268 N
KDM5B Echinops telfairi ENSETEG00000018113 N
ENSFALG00000002622 Ficedula albicollis ENSFALG00000002622 N
KDM5B Felis catus ENSFCAG00000013102 N
KDM5B Homo sapiens ENSG00000117139 N
kdm5ba Gasterosteus aculeatus ENSGACG00000000508 N
kdm5bb Gasterosteus aculeatus ENSGACG00000011868 N
ENSGALG00000000427 Gallus gallus ENSGALG00000000427 N
KDM5B Gorilla gorilla ENSGGOG00000003073 N
ENSGMOG00000001476 Gadus morhua ENSGMOG00000001476 N
ENSGMOG00000019538 Gadus morhua ENSGMOG00000019538 N
ENSGMOG00000019547 Gadus morhua ENSGMOG00000019547 N
ENSLACG00000012136 Latimeria chalumnae ENSLACG00000012136 N
KDM5B Loxodonta africana ENSLAFG00000005104 N
ENSLOCG00000010123 Lepisosteus oculatus ENSLOCG00000010123 N
ENSMEUG00000014994 Macropus eugenii ENSMEUG00000014994 N
KDM5B Meleagris gallopavo ENSMGAG00000001393 N
KDM5B Microcebus murinus ENSMICG00000006046 N
ENSMLUG00000015035 Myotis lucifugus ENSMLUG00000015035 N
ENSMLUG00000024285 Myotis lucifugus ENSMLUG00000024285 N
KDM5B Macaca mulatta ENSMMUG00000015233 N
KDM5B Monodelphis domestica ENSMODG00000000755 N
ENSMPUG00000011183 Mustela putorius furo ENSMPUG00000011183 N
Kdm5b Mus musculus ENSMUSG00000042207 N
Kdm5d Mus musculus ENSMUSG00000056673 N
ENSNLEG00000018101 Nomascus leucogenys ENSNLEG00000018101 N
KDM5B Ornithorhynchus anatinus ENSOANG00000002512 N
ENSOARG00000018421 Ovis aries ENSOARG00000018421 N
KDM5B Oryctolagus cuniculus ENSOCUG00000008003 N
ENSONIG00000016770 Oreochromis niloticus ENSONIG00000016770 N
ENSONIG00000019223 Oreochromis niloticus ENSONIG00000019223 N
kdm5ba Oryzias latipes ENSORLG00000014767 N
kdm5bb Oryzias latipes ENSORLG00000014990 N
ENSP00000356233 Macaca fascicularis ENSP00000356233 N
ENSP00000356233-D1 Bos grunniens ENSP00000356233-D1 N
ENSPANG00000014633 Papio anubis ENSPANG00000014633 N
ENSPFOG00000006840 Poecilia formosa ENSPFOG00000006840 N
ENSPFOG00000015221 Poecilia formosa ENSPFOG00000015221 N
ENSPMAG00000003030 Petromyzon marinus ENSPMAG00000003030 N
ENSPPYG00000000346 Pongo abelii ENSPPYG00000000346 N
KDM5B Pan troglodytes ENSPTRG00000001856 N
ENSPTRG00000021925 Pan troglodytes ENSPTRG00000021925 N
KDM5B Pteropus vampyrus ENSPVAG00000011030 N
Kdm5c Rattus norvegicus ENSRNOG00000057706 N
Kdm5b Rattus norvegicus ENSRNOG00000060544 N
KDM5C Sorex araneus ENSSARG00000000542 N
KDM5B Sorex araneus ENSSARG00000012265 N
ENSSHAG00000000588 Sarcophilus harrisii ENSSHAG00000000588 N
ENSSHAG00000015215 Sarcophilus harrisii ENSSHAG00000015215 N
KDM5B Sus scrofa ENSSSCG00000010928 N
ENSSTOG00000000372 Ictidomys tridecemlineatus ENSSTOG00000000372 N
KDM5B Tupaia belangeri ENSTBEG00000006521 N
KDM5B Taeniopygia guttata ENSTGUG00000001257 N
kdm5ba Tetraodon nigroviridis ENSTNIG00000007074 N
kdm5ba Takifugu rubripes ENSTRUG00000013308 N
KDM5B Tursiops truncatus ENSTTRG00000001078 N
KDM5B Vicugna pacos ENSVPAG00000006056 N
ENSXMAG00000003378 Xiphophorus maculatus ENSXMAG00000003378 N
ENSXMAG00000011463 Xiphophorus maculatus ENSXMAG00000011463 N
lid Drosophila melanogaster FBgn0031759 N
GF14289 Drosophila ananassae FBgn0091316 N
GG24264 Drosophila erecta FBgn0116396 N
GH10714 Drosophila grimshawi FBgn0118195 N
GI11300 Drosophila mojavensis FBgn0134061 N
GL19092 Drosophila persimilis FBgn0156692 N
GM17977 Drosophila sechellia FBgn0172884 N
GD22615 Drosophila simulans FBgn0194016 N
GK15405 Drosophila willistoni FBgn0217410 N
GE18962 Drosophila yakuba FBgn0236332 N
GA25342 Drosophila pseudoobscura FBgn0246723 N
GB52426 Apis mellifera GB52426 N
HMEL015554 Heliconius melpomene HMEL015554 N
KGM_20601 Danaus plexippus KGM_20601 N
LCUP008086 Lucilia cuprina LCUP008086 N
LDEC003750 Leptinotarsa decemlineata LDEC003750 N
LLOJ009523 Lutzomyia longipalpis LLOJ009523 N
LotgiG205701 Lottia gigantea LotgiG205701 N
MCINX012993 Melitaea cinxia MCINX012993 N
MDOA009345 Musca domestica MDOA009345 N
Myotis_brandtii_KDM5B_10008160 Myotis brandtii Myotis_brandtii_KDM5B_10008160 N
Myotis_brandtii_KDM5B_10012819 Myotis brandtii Myotis_brandtii_KDM5B_10012819 N
NV16665 Nasonia vitripennis NV16665 N
Ogr08783 Ophisaurus gracilis Ogr08783 N
PAS_chr2-1_0025 Komagataella pastoris PAS_chr2-1_0025 I
Sakowv30029063m.g Saccoglossus kowalevskii Sakowv30029063m.g N
SMAR004279 Strigamia maritima SMAR004279 N
Tal_R003404 Tyto alba Tal_R003404 N
tetur02g05990 Tetranychus urticae tetur02g05990 N
kdm5b Xenopus tropicalis XB-GENE-856240 N
XP_002490905.1 Pichia pastoris XP_002490905.1 I
YQE_09281 Dendroctonus ponderosae YQE_09281 N