dec1a (Oryzias latipes)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSORLG00000012739 T036433_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Bhlhe40
M00119_2.00 		Mus musculus
DCACGTGMN
NKCACGTGH		 PBM
Badis et al.(2009)
Bhlhb2_1274 		0.890 0.963
Bhlhe40
M01738_2.00 		Mus musculus
NCACRNBN
NVNYGTGN		 PBM
Weirauch et al.(2014)
pTH4330 		0.890 0.963
BHLHE40
M02788_2.00 		Homo sapiens
NKCACGTGMH
DKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB2_1 		0.890 0.963
Bhlhe40
M02817_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_1 		0.890 0.963
Bhlhe40
M02818_2.00 		Mus musculus
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
Bhlhb2_2 		0.890 0.963
BHLHE40
M04126_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_HT-SELEX 		0.890 0.963
BHLHE40
M07798_2.00 		Homo sapiens
DCACGTGMSN
NSKCACGTGH		 ChIP-seq
Gerstein et al.(2012)
HepG2_BHLHE40_HudsonAlpha 		0.890 0.963
BHLHE40
M08726_2.00 		Homo sapiens
DDCACGTGMS
SKCACGTGHH		 Misc
Kulakovskiy et al.(2013)
BHE40_HUMAN.H11MO.0.A 		0.890 0.963
Bhlhe40
M08761_2.00 		Mus musculus
DCACGTGMS
SKCACGTGH		 Misc
Kulakovskiy et al.(2013)
BHE40_MOUSE.H11MO.0.A 		0.890 0.963
BHLHE40
M09456_2.00 		Homo sapiens
DCACGTGMNN
NNKCACGTGH		 Misc
Heinz et al.(2010)
HepG2-BHLHE40_GSE31477 		0.890 0.963
BHLHE40
M09842_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BHLHE40_03 		0.890 0.963
BHLHE40
M09843_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q2 		0.890 0.963
BHLHE40
M09844_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC1_Q3 		0.890 0.963
BHLHE40
M09845_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$STRA13_01 		0.890 0.963
BHLHE40
M04127_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE40_eDBD_Methyl-HT-SELEX 		0.890 0.963
Bhlhe41
M01739_2.00 		Mus musculus
NMNCGTGMN
NKCACGNKN		 PBM
Weirauch et al.(2014)
pTH5060 		0.890 0.944
BHLHE41
M02782_2.00 		Homo sapiens
NKCACGTGMN
NKCACGTGMN		 SELEX
Jolma et al.(2013)
BHLHB3_1 		0.890 0.944
BHLHE41
M02783_2.00 		Homo sapiens
RKCACGTGAY
RTCACGTGMY		 SELEX
Jolma et al.(2013)
BHLHE41_1 		0.890 0.944
BHLHE41
M04106_2.00 		Homo sapiens
VTCACGTGAB
VTCACGTGAB		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_HT-SELEX 		0.890 0.944
BHLHE41
M09833_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q2 		0.890 0.944
BHLHE41
M09834_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEC2_Q3 		0.890 0.944
BHLHE41
M04107_2.00 		Homo sapiens
RTCACGTGAY
RTCACGTGAY		 SELEX
Yin et al.(2017)
BHLHE41_eDBD_Methyl-HT-SELEX 		0.890 0.944
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000015957 bHLH 51 105

Links

Other bHLH family TFs
Other Oryzias latipes TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000013942 Astyanax mexicanus ENSAMXG00000013942 N 0.000
ENSAMXG00000015160 Astyanax mexicanus ENSAMXG00000015160 N 0.000
ENSAPLG00000013653 Anas platyrhynchos ENSAPLG00000013653 N 0.000
ENSCSAG00000017432 Chlorocebus sabaeus ENSCSAG00000017432 N 0.000
ahrrb Danio rerio ENSDARG00000052618 N 0.000
ENSFCAG00000024757 Felis catus ENSFCAG00000024757 N 0.000
AHRR Homo sapiens ENSG00000063438 N 0.000
ahrrb Gasterosteus aculeatus ENSGACG00000001925 N 0.000
AHRR Gallus gallus ENSGALG00000013402 N 0.000
AHRR Gorilla gorilla ENSGGOG00000013694 N 0.000
ENSGMOG00000009114 Gadus morhua ENSGMOG00000009114 N 0.000
ENSLACG00000000606 Latimeria chalumnae ENSLACG00000000606 N 0.000
AHRR Meleagris gallopavo ENSMGAG00000007591 N 0.000
AHRR Myotis lucifugus ENSMLUG00000012589 N 0.000
PDCD6 Macaca mulatta ENSMMUG00000000752 N 0.000
ENSMMUG00000030507 Macaca mulatta ENSMMUG00000030507 N 0.000
ENSMMUP00000001012 Macaca fascicularis ENSMMUP00000001012 N 0.000
ENSMMUP00000035736 Macaca fascicularis ENSMMUP00000035736 N 0.000
ENSMODG00000028175 Monodelphis domestica ENSMODG00000028175 N 0.000
Ahrr Mus musculus ENSMUSG00000021575 N 0.000
ENSNLEG00000010815 Nomascus leucogenys ENSNLEG00000010815 N 0.000
ENSOANG00000009611 Ornithorhynchus anatinus ENSOANG00000009611 N 0.000
ENSOCUG00000021638 Oryctolagus cuniculus ENSOCUG00000021638 N 0.000
AHRR Otolemur garnettii ENSOGAG00000010416 N 0.000
ENSONIG00000017966 Oreochromis niloticus ENSONIG00000017966 N 0.000
ahr2 Oryzias latipes ENSORLG00000000135 N 0.000
ahrrb Oryzias latipes ENSORLG00000005309 N 0.000
ENSPANG00000023865 Papio anubis ENSPANG00000023865 N 0.000
ENSPFOG00000012230 Poecilia formosa ENSPFOG00000012230 N 0.000
ENSPSIG00000007107 Pelodiscus sinensis ENSPSIG00000007107 N 0.000
AHRR Pteropus vampyrus ENSPVAG00000007881 N 0.000
Ahrr Rattus norvegicus ENSRNOG00000014721 N 0.000
ENSSHAG00000010002 Sarcophilus harrisii ENSSHAG00000010002 N 0.000
ENSTGUG00000008731 Taeniopygia guttata ENSTGUG00000008731 N 0.000
ahrrb Tetraodon nigroviridis ENSTNIG00000008751 N 0.000
ahrr Takifugu rubripes ENSTRUG00000003745 N 0.000
fgenesh2_pg.scaffold_330000001 Branchiostoma floridae fgenesh2_pg.scaffold_330000001 N 0.000
yakG008778 Bos grunniens yakG008778 N 0.000