CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPFOG00000016659
(
Poecilia formosa
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSPFOG00000016659
T036730_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hes1
M01726_2.00
Mus musculus
NVCACGYKNN
NNMRCGTGBN
PBM
Weirauch et al.(2014)
pTH5059
0.914
0.982
HES1
M04090_2.00
Homo sapiens
VVCACGYGHM
KDCRCGTGBB
SELEX
Yin et al.(2017)
HES1_eDBD_HT-SELEX
0.914
0.982
HES1
M09822_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q2
0.914
0.982
HES1
M09823_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q3
0.914
0.982
HES1
M09824_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q4
0.914
0.982
HES1
M09825_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q6
0.914
0.982
HES1
M04091_2.00
Homo sapiens
VNYACNYNHN
NDNRNGTRNB
SELEX
Yin et al.(2017)
HES1_eDBD_Methyl-HT-SELEX
0.914
0.982
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPFOP00000016729
bHLH
46
103
RKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ
Links
Other
bHLH
family TFs
Other
Poecilia formosa
TFs
114 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29916.m000544
Ricinus communis
29916.m000544
N
0.000
cassava30062.valid.m1
Manihot esculenta
cassava30062.valid.m1
N
0.000
Ciclev10018916m.g
Citrus clementina
Ciclev10018916m.g
N
0.000
Cla005738
Citrullus lanatus
Cla005738
N
0.000
Cucsa.320850
Cucumis sativus
Cucsa.320850
N
0.000
evm.TU.supercontig_29.139
Carica papaya
evm.TU.supercontig_29.139
N
0.000
gene31749-v1.0-hybrid
Fragaria vesca
gene31749-v1.0-hybrid
N
0.000
Gorai.004G200600
Gossypium raimondii
Gorai.004G200600
N
0.000
Gorai.008G238300
Gossypium raimondii
Gorai.008G238300
N
0.000
Lus10004353.g
Linum usitatissimum
Lus10004353.g
N
0.000
Lus10028934.g
Linum usitatissimum
Lus10028934.g
N
0.000
MDP0000275704
Malus domestica
MDP0000275704
N
0.000
PK22905.1
Cannabis sativa
PK22905.1
N
0.000
Pm023512
Prunus mume
Pm023512
N
0.000
POPTR_0001s00480
Populus trichocarpa
POPTR_0001s00480
N
0.000
POPTR_0003s11020
Populus trichocarpa
POPTR_0003s11020
N
0.000
PRUPE_ppa001561mg
Prunus persica
PRUPE_ppa001561mg
N
0.000
SapurV1A.0324s0040
Salix purpurea
SapurV1A.0324s0040
N
0.000
SapurV1A.0325s0140
Salix purpurea
SapurV1A.0325s0140
N
0.000
TCM_015991
Theobroma cacao
TCM_015991
N
0.000