KAFR_0D03630 (Kazachstania africana)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 KAFR_0D03630 T040618_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBF1
M00374_2.00 		Saccharomyces cerevisiae
NCACGTGAY
RTCACGTGN		 PBM
Berger et al.(2006)
Cbf1 		0.863 0.837
CBF1
M01520_2.00 		Saccharomyces cerevisiae
CACGTGAYH
DRTCACGTG		 PBM
Zhu et al.(2009)
Cbf1 		0.863 0.837
CBF1
M07440_2.00 		Saccharomyces cerevisiae
TCACGTGH
DCACGTGA		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0281.1 		0.863 0.837
CBF1
M08485_2.00 		Saccharomyces cerevisiae
NCAYRTGN
NCAYRTGN		 Misc
DeBoer et al.(2011)
YJR060W_1347 		0.863 0.837
CBF1
M09483_2.00 		Saccharomyces cerevisiae
KCACGTGAYN
NRTCACGTGM		 Misc
Heinz et al.(2010)
Yeast-Cbf1_GSE29506 		0.863 0.837
CBF1
M09897_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$CBF1_02 		0.863 0.837
CBF1
M09898_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$CBF1_03 		0.863 0.837
CBF1
M09899_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$CBF1_04 		0.863 0.837
CBF1
M09900_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$CBF1_B 		0.863 0.837
CBF1
M09901_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$CBF1_Q6 		0.863 0.837
CBF1
M00010_2.00 		Saccharomyces cerevisiae
NDCACGTGANN
NNTCACGTGHN		 PBM
Badis et al.(2008)
CBF1_2160 		0.851 0.816
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCF58011 bHLH 172 220

Links

Other bHLH family TFs
Other Kazachstania africana TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F443_09674 Phytophthora parasitica F443_09674 N
fgenesh_scip_prom.28083.7556 Phytophthora lateralis fgenesh_scip_prom.28083.7556 N
HpaG807764 Hyaloperonospora arabidopsidis HpaG807764 N
maker-pag1_scaffold_106-fgenesh-gene-0.12 Pythium aphanidermatum maker-pag1_scaffold_106-fgenesh-gene-0.12 N
maker-par_contig_313-fgenesh-gene-0.2 Pythium arrhenomanes maker-par_contig_313-fgenesh-gene-0.2 N
maker-pir_contig_264-snap-gene-0.19 Pythium irregulare maker-pir_contig_264-snap-gene-0.19 N
maker-pve_contig_7-fgenesh-gene-0.20 Pythium vexans maker-pve_contig_7-fgenesh-gene-0.20 N
Phyra85385 Phytophthora ramorum Phyra85385 N
Physo134456 Phytophthora sojae Physo134456 N
PITG_19220 Phytophthora infestans PITG_19220 N
PYU1_G014859 Pythium ultimum PYU1_G014859 N
SPRG_07821 Saprolegnia parasitica SPRG_07821 N