POPTR_0005s05500 (Populus trichocarpa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 POPTR_0005s05500 T043800_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0005s05500.1 bHLH 178 225

Links

Other bHLH family TFs
Other Populus trichocarpa TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29598.m000464 Ricinus communis 29598.m000464 N 0.878
29883.m001988 Ricinus communis 29883.m001988 N 0.848
Aquca_017_00590 Aquilegia coerulea Aquca_017_00590 N 0.848
AT1G03040 Arabidopsis thaliana AT1G03040 N 0.878
UNE12 Arabidopsis thaliana AT4G02590 N 0.878
Bo01031s030 Brassica oleracea Bo01031s030 N 0.878
Bo2g100750 Brassica oleracea Bo2g100750 N 0.878
Bo5g003580 Brassica oleracea Bo5g003580 N 0.878
Bo9g005930 Brassica oleracea Bo9g005930 N 0.878
Bostr.2983s0202 Boechera stricta Bostr.2983s0202 N 0.878
Bra000872 Brassica rapa Bra000872 N 0.878
Bra018539 Brassica rapa Bra018539 N 0.878
Bra033368 Brassica rapa Bra033368 N 0.878
Bra036256 Brassica rapa Bra036256 N 0.878
Cagra.0635s0023 Capsella grandiflora Cagra.0635s0023 N 0.878
Cagra.0897s0074 Capsella grandiflora Cagra.0897s0074 N 0.878
Carubv10001523m.g Capsella rubella Carubv10001523m.g N 0.878
Carubv10009831m.g Capsella rubella Carubv10009831m.g N 0.878
cassava18573.valid.m1 Manihot esculenta cassava18573.valid.m1 N 0.878
cassava22704.valid.m1 Manihot esculenta cassava22704.valid.m1 N 0.865
cassava36725.valid.m1 Manihot esculenta cassava36725.valid.m1 N 0.848
Ca_03755 Cicer arietinum Ca_03755 N 0.848
Ca_07790 Cicer arietinum Ca_07790 N 0.848
Ca_12194 Cicer arietinum Ca_12194 N 0.848
chr1.CM0375.380.nc Lotus japonicus chr1.CM0375.380.nc N 0.848
Ciclev10021443m.g Citrus clementina Ciclev10021443m.g N 0.848
Cla011475 Citrullus lanatus Cla011475 N 0.848
Cla015040 Citrullus lanatus Cla015040 N 0.848
Cucsa.289090 Cucumis sativus Cucsa.289090 N 0.848
Cucsa.388780 Cucumis sativus Cucsa.388780 N 0.848
Eucgr.B01487 Eucalyptus grandis Eucgr.B01487 N 0.848
Eucgr.H04337 Eucalyptus grandis Eucgr.H04337 N 0.848
evm.TU.supercontig_117.94 Carica papaya evm.TU.supercontig_117.94 N 0.848
fgenesh2_kg.1__235__AT1G03040.1 Arabidopsis lyrata fgenesh2_kg.1__235__AT1G03040.1 N 0.878
UNE12 Arabidopsis lyrata fgenesh2_kg.6__3435__AT4G02590.2 N 0.878
gene16564-v1.0-hybrid Fragaria vesca gene16564-v1.0-hybrid N 0.848
GLYMA02G16110 Glycine max GLYMA02G16110 N 0.848
GLYMA03G31510 Glycine max GLYMA03G31510 N 0.848
GLYMA10G03690 Glycine max GLYMA10G03690 N 0.848
GLYMA10G30430 Glycine max GLYMA10G30430 N 0.848
GLYMA19G34360 Glycine max GLYMA19G34360 N 0.848
GLYMA20G36770 Glycine max GLYMA20G36770 N 0.848
Gorai.001G242500 Gossypium raimondii Gorai.001G242500 N 0.848
Gorai.007G141800 Gossypium raimondii Gorai.007G141800 N 0.848
Gorai.007G277200 Gossypium raimondii Gorai.007G277200 N 0.848
Lus10006587.g Linum usitatissimum Lus10006587.g N 0.878
Lus10015909.g Linum usitatissimum Lus10015909.g N 0.878
MDP0000295593 Malus domestica MDP0000295593 N 0.848
MTR_1g070870 Medicago truncatula MTR_1g070870 N 0.848
MTR_1g080890 Medicago truncatula MTR_1g080890 N 0.848
orange1.1g022649m.g Citrus sinensis orange1.1g022649m.g N 0.848
PK20184.1 Cannabis sativa PK20184.1 N 0.848
PK25419.1 Cannabis sativa PK25419.1 N 0.848
Pm003525 Prunus mume Pm003525 N 0.848
POPTR_0002s04620 Populus trichocarpa POPTR_0002s04620 N 0.848
PRUPE_ppa008172mg Prunus persica PRUPE_ppa008172mg N 0.848
SapurV1A.0006s1290 Salix purpurea SapurV1A.0006s1290 N 0.848
SapurV1A.0110s0180 Salix purpurea SapurV1A.0110s0180 N 0.890
SapurV1A.0729s0150 Salix purpurea SapurV1A.0729s0150 N 0.914
TCM_004217 Theobroma cacao TCM_004217 N 0.848
TCM_026346 Theobroma cacao TCM_026346 N 0.848
Thhalv10008279m.g Eutrema salsugineum Thhalv10008279m.g N 0.878
Thhalv10028824m.g Eutrema salsugineum Thhalv10028824m.g N 0.878
VIT_05s0020g04620 Vitis vinifera VIT_05s0020g04620 N 0.848
VIT_07s0141g00220 Vitis vinifera VIT_07s0141g00220 N 0.848
VIT_14s0030g02230 Vitis vinifera VIT_14s0030g02230 N 0.848