Brh_R012268 (Buceros rhinoceros)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Brh_R012268 T046737_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HIF1A
M08049_2.00 		Homo sapiens
NBACGTGCNN
NNGCACGTVN		 ChIP-seq
Mathelier et al.(2014)
MA1106.1 		0.857 0.887
HIF1A
M08713_2.00 		Homo sapiens
VDACGTGM
KCACGTHB		 Misc
Kulakovskiy et al.(2013)
HIF1A_HUMAN.H11MO.0.C 		0.857 0.887
Hif1a
M08750_2.00 		Mus musculus
VDACGTGM
KCACGTHB		 Misc
Kulakovskiy et al.(2013)
HIF1A_MOUSE.H11MO.0.C 		0.857 0.887
HIF1A
M09454_2.00 		Homo sapiens
KACGTGMN
NKCACGTM		 Misc
Heinz et al.(2010)
MCF7-HIF1a_GSE28352 		0.857 0.887
HIF1A
M09807_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1A_Q3 		0.857 0.887
HIF1A
M09808_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1A_Q5 		0.857 0.887
HIF1A
M09809_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1A_Q6 		0.857 0.887
HIF1A
M09810_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1_Q3 		0.857 0.887
HIF1A
M09811_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HIF1_Q5 		0.857 0.887
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Brh_R012268 bHLH 1 53

Links

Other bHLH family TFs
Other Buceros rhinoceros TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29092.m000462 Ricinus communis 29092.m000462 N 0.000
Ca_00768 Cicer arietinum Ca_00768 N 0.000
Cla017994 Citrullus lanatus Cla017994 N 0.000
Cucsa.378470 Cucumis sativus Cucsa.378470 N 0.000
GLYMA03G34970 Glycine max GLYMA03G34970 N 0.000
GLYMA10G07740 Glycine max GLYMA10G07740 N 0.000
GLYMA15G02900 Glycine max GLYMA15G02900 N 0.000
GLYMA19G37670 Glycine max GLYMA19G37670 N 0.000
LjSGA_035548.1 Lotus japonicus LjSGA_035548.1 N 0.000
Lus10014376.g Linum usitatissimum Lus10014376.g N 0.000
Lus10023873.g Linum usitatissimum Lus10023873.g N 0.000
MDP0000195376 Malus domestica MDP0000195376 N 0.000
Pm019386 Prunus mume Pm019386 I 0.000
POPTR_0006s02180 Populus trichocarpa POPTR_0006s02180 N 0.000
POPTR_0016s02010 Populus trichocarpa POPTR_0016s02010 N 0.000
SapurV1A.0154s0220 Salix purpurea SapurV1A.0154s0220 N 0.000
HRD Vitis vinifera VIT_08s0007g03810 N 0.000