Pm019386 (Prunus mume)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pm019386 T006612_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1B
M06643_2.00 		Arabidopsis thaliana
DHBRCCGACRHN
NDYGTCGGYVDH		 Dap-seq
OMalley et al.(2016)
CBF1_col_a 		0.730 0.920
DREB1B
M06644_2.00 		Arabidopsis thaliana
NNNHBRCCGACAWNN
NNWTGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF1_colamp_a 		0.730 0.920
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.713 0.920
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.713 0.920
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.713 0.920
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.713 0.920
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.702 0.900
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.702 0.900
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.691 0.900
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.691 0.900
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.691 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm019386 AP2 30 81

Links

Other AP2 family TFs
Other Prunus mume TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA16G32330 Glycine max GLYMA16G32330 I 0.751
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.749
PK23332.1 Cannabis sativa PK23332.1 I 0.749
Gorai.008G280600 Gossypium raimondii Gorai.008G280600 I 0.744
mgf026642m Mimulus guttatus mgf026642m I 0.742
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.741
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.738
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.738
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.736
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.735
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.734
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.734
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.734
Cla006315 Citrullus lanatus Cla006315 I 0.733
DREB1B Arabidopsis thaliana AT4G25490 D 0.730
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.728
mgf017477m Mimulus guttatus mgf017477m N 0.727
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.727
Carubv10006809m.g Capsella rubella Carubv10006809m.g I 0.727
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.725
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.722
Cagra.2248s0025 Capsella grandiflora Cagra.2248s0025 I 0.722
Ca_00768 Cicer arietinum Ca_00768 N 0.721
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.720
CBF2 Arabidopsis lyrata fgenesh2_kg.7__1712__AT4G25470.1 I 0.719
Cla002362 Citrullus lanatus Cla002362 I 0.717
DREB1A Arabidopsis thaliana AT4G25480 D 0.713
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.712
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I 0.712
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.712
Carubv10005709m.g Capsella rubella Carubv10005709m.g I 0.711
Bostr.7867s0361 Boechera stricta Bostr.7867s0361 I 0.711
Bostr.7867s0359 Boechera stricta Bostr.7867s0359 I 0.711
Cagra.28753s0001 Capsella grandiflora Cagra.28753s0001 I 0.711
30147.m014313 Ricinus communis 30147.m014313 I 0.708
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.707
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.706
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.705
GLYMA13G21560 Glycine max GLYMA13G21560 N 0.705
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.705
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.702
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.702
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.702
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.702
DREB1D Arabidopsis thaliana AT5G51990 D 0.702
Bo9g104770 Brassica oleracea Bo9g104770 I 0.702
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.702
Bra028290 Brassica rapa Bra028290 I 0.702
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I 0.699
Cla011674 Citrullus lanatus Cla011674 I 0.697
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I 0.696
VIT_06s0061g01390 Vitis vinifera VIT_06s0061g01390 I 0.696
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.695
Gorai.006G046200 Gossypium raimondii Gorai.006G046200 I 0.695
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I 0.691
Cucsa.259750 Cucumis sativus Cucsa.259750 I 0.691
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.691
DREB1C Arabidopsis thaliana AT4G25470 D 0.691
mgf017136m Mimulus guttatus mgf017136m I 0.689
Cla021417 Citrullus lanatus Cla021417 I 0.688
MDP0000154764 Malus domestica MDP0000154764 I 0.686
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.686
MDP0000198054 Malus domestica MDP0000198054 I 0.684
MTR_6g466130 Medicago truncatula MTR_6g466130 I 0.684
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.683
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I 0.682
Carubv10006965m.g Capsella rubella Carubv10006965m.g I 0.682
Pm023775 Prunus mume Pm023775 I 0.682
GSMUA_Achr11G21630_001 Musa acuminata GSMUA_Achr11G21630_001 I 0.682
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I 0.681
GLYMA20G29410 Glycine max GLYMA20G29410 I 0.681
VIT_02s0025g04460 Vitis vinifera VIT_02s0025g04460 I 0.681
TCM_016175 Theobroma cacao TCM_016175 I 0.681
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I 0.681