Cucsa.259750 (Cucumis sativus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cucsa.259750 T007074_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TINY
M01094_2.00 		Arabidopsis thaliana
NHRCCGACAN
NTGTCGGYDN		 PBM
Lambert et al.(2019)
pTH11541 		0.784 0.837
TINY
M06669_2.00 		Arabidopsis thaliana
HNYCRCCGACANHDN
NHDNTGTCGGYGRND		 Dap-seq
OMalley et al.(2016)
TINY_col_a 		0.784 0.837
ERF035
M06631_2.00 		Arabidopsis thaliana
YCACCGACANWDNH
DNHWNTGTCGGTGR		 Dap-seq
OMalley et al.(2016)
AT3G60490_col_a 		0.700 0.857
ERF035
M06632_2.00 		Arabidopsis thaliana
NNBCACCGACAHWNNN
NNNWDTGTCGGTGVNN		 Dap-seq
OMalley et al.(2016)
AT3G60490_colamp_a 		0.700 0.857
ERF034
M06614_2.00 		Arabidopsis thaliana
NHNYCACCGACANHD
HDNTGTCGGTGRNDN		 Dap-seq
OMalley et al.(2016)
At2g44940_col_a 		0.699 0.857
ERF034
M06615_2.00 		Arabidopsis thaliana
NDBCACCGACANH
DNTGTCGGTGVHN		 Dap-seq
OMalley et al.(2016)
At2g44940_colamp_a 		0.699 0.857
ERF043
M01627_2.00 		Arabidopsis thaliana
YRCCGACA
TGTCGGYR		 PBM
Weirauch et al.(2014)
pTH7413 		0.689 0.776
ERF043
M06651_2.00 		Arabidopsis thaliana
NNYCACCGACANHNNN
NNNDNTGTCGGTGRNN		 Dap-seq
OMalley et al.(2016)
At4g32800_colamp_a 		0.689 0.776
ERF043
M06652_2.00 		Arabidopsis thaliana
NNYCACCGACANHNNH
DNNDNTGTCGGTGRNN		 Dap-seq
OMalley et al.(2016)
At4g32800_col 		0.689 0.776
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.259750.1 AP2 1 51

Links

Other AP2 family TFs
Other Cucumis sativus TFs

237 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla021417 Citrullus lanatus Cla021417 I 0.838
TINY Arabidopsis thaliana AT5G25810 D 0.784
Bo7g095710 Brassica oleracea Bo7g095710 I 0.784
Bra009862 Brassica rapa Bra009862 I 0.784
Bostr.29827s0238 Boechera stricta Bostr.29827s0238 I 0.784
Carubv10002601m.g Capsella rubella Carubv10002601m.g I 0.784
PGSC0003DMG400026035 Solanum tuberosum PGSC0003DMG400026035 I 0.783
Solyc01g090560.2 Solanum lycopersicum Solyc01g090560.2 I 0.783
mgf026339m Mimulus guttatus mgf026339m I 0.776
MDP0000790788 Malus domestica MDP0000790788 I 0.773
PGSC0003DMG400012087 Solanum tuberosum PGSC0003DMG400012087 I 0.770
MTR_1g006660 Medicago truncatula MTR_1g006660 I 0.761
GLYMA03G27050 Glycine max GLYMA03G27050 I 0.760
GLYMA07G14560 Glycine max GLYMA07G14560 I 0.760
AMTR_s00111p00051610 Amborella trichopoda AMTR_s00111p00051610 I 0.759
GLYMA07G02001 Glycine max GLYMA07G02001 I 0.759
VIT_15s0021g02110 Vitis vinifera VIT_15s0021g02110 I 0.759
Ca_14911 Cicer arietinum Ca_14911 I 0.759
Eucgr.E01593 Eucalyptus grandis Eucgr.E01593 I 0.759
GLYMA06G08990 Glycine max GLYMA06G08990 I 0.758
GLYMA08G21650 Glycine max GLYMA08G21650 I 0.758
GLYMA04G08901 Glycine max GLYMA04G08901 I 0.757
GLYMA14G22740 Glycine max GLYMA14G22740 I 0.756
PRUPE_ppa009533mg Prunus persica PRUPE_ppa009533mg I 0.756
TCM_037194 Theobroma cacao TCM_037194 I 0.756
VIT_04s0008g03400 Vitis vinifera VIT_04s0008g03400 I 0.756
Pm005151 Prunus mume Pm005151 I 0.756
29794.m003381 Ricinus communis 29794.m003381 I 0.756
cassava17185.m1 Manihot esculenta cassava17185.m1 I 0.756
cassava18256.valid.m1 Manihot esculenta cassava18256.valid.m1 I 0.756
Ciclev10009370m.g Citrus clementina Ciclev10009370m.g I 0.756
gene08838-v1.0-hybrid Fragaria vesca gene08838-v1.0-hybrid I 0.756
Gorai.010G106600 Gossypium raimondii Gorai.010G106600 I 0.756
MDP0000241650 Malus domestica MDP0000241650 I 0.756
MDP0000242611 Malus domestica MDP0000242611 I 0.756
orange1.1g027107m.g Citrus sinensis orange1.1g027107m.g I 0.756
SapurV1A.0291s0070 Salix purpurea SapurV1A.0291s0070 I 0.756
PK28082.1 Cannabis sativa PK28082.1 I 0.756
DREB3 Arabidopsis thaliana AT5G11590 I 0.755
Bo9g170060 Brassica oleracea Bo9g170060 I 0.755
Bra008952 Brassica rapa Bra008952 I 0.755
TINY2 Arabidopsis lyrata fgenesh2_kg.6__1130__AT5G11590.1 I 0.755
MTR_3g110205 Medicago truncatula MTR_3g110205 I 0.755
MTR_8g006410 Medicago truncatula MTR_8g006410 I 0.755
Bostr.20055s0079 Boechera stricta Bostr.20055s0079 I 0.755
Carubv10003136m.g Capsella rubella Carubv10003136m.g I 0.755
Eucgr.C00546 Eucalyptus grandis Eucgr.C00546 I 0.755
Thhalv10015895m.g Eutrema salsugineum Thhalv10015895m.g I 0.755
AMTR_s00056p00064760 Amborella trichopoda AMTR_s00056p00064760 I 0.754
GLYMA17G27520 Glycine max GLYMA17G27520 I 0.754
MTR_8g013860 Medicago truncatula MTR_8g013860 I 0.754
VIT_00s0341g00070 Vitis vinifera VIT_00s0341g00070 I 0.748
VIT_00s0632g00010 Vitis vinifera VIT_00s0632g00010 I 0.748
Eucgr.C02928 Eucalyptus grandis Eucgr.C02928 I 0.748
mgf024703m Mimulus guttatus mgf024703m I 0.745
Bo2g010530 Brassica oleracea Bo2g010530 I 0.743
Bo6g077080 Brassica oleracea Bo6g077080 I 0.743
Bra003415 Brassica rapa Bra003415 I 0.743
LjT33K05.60.nd Lotus japonicus LjT33K05.60.nd I 0.743
Bra023332 Brassica rapa Bra023332 I 0.742
Cla022553 Citrullus lanatus Cla022553 I 0.742
Cucsa.161310 Cucumis sativus Cucsa.161310 I 0.742
Bo8g095240 Brassica oleracea Bo8g095240 I 0.740
Bra007539 Brassica rapa Bra007539 I 0.740
Thhalv10006200m.g Eutrema salsugineum Thhalv10006200m.g I 0.740
GSMUA_Achr10G27680_001 Musa acuminata GSMUA_Achr10G27680_001 I 0.739
Gorai.004G289800 Gossypium raimondii Gorai.004G289800 I 0.739
PGSC0003DMG400002235 Solanum tuberosum PGSC0003DMG400002235 I 0.738
Solyc08g066660.1 Solanum lycopersicum Solyc08g066660.1 I 0.738
VIT_00s0341g00080 Vitis vinifera VIT_00s0341g00080 I 0.736
PGSC0003DMG400007025 Solanum tuberosum PGSC0003DMG400007025 I 0.734
Solyc05g050830.1 Solanum lycopersicum Solyc05g050830.1 I 0.734
chr1.LjT23O20.60.nd Lotus japonicus chr1.LjT23O20.60.nd I 0.732
Ca_01908 Cicer arietinum Ca_01908 I 0.730
Ca_28185 Cicer arietinum Ca_28185 I 0.730
evm.TU.supercontig_7.269 Carica papaya evm.TU.supercontig_7.269 I 0.730
gene25758-v1.0-hybrid Fragaria vesca gene25758-v1.0-hybrid I 0.730
GSMUA_Achr10G21470_001 Musa acuminata GSMUA_Achr10G21470_001 I 0.729
MDP0000174352 Malus domestica MDP0000174352 I 0.729
Cla015715 Citrullus lanatus Cla015715 I 0.726
BGIOSGA016882 Oryza indica BGIOSGA016882 I 0.725
OGLUM02G27010 Oryza glumaepatula OGLUM02G27010 I 0.725
OGLUM04G20750 Oryza glumaepatula OGLUM04G20750 I 0.725
OMERI02G25900 Oryza meridionalis OMERI02G25900 I 0.725
OMERI04G17260 Oryza meridionalis OMERI04G17260 I 0.725
ONIVA02G28960 Oryza nivara ONIVA02G28960 I 0.725
ONIVA04G19040 Oryza nivara ONIVA04G19040 I 0.725
OPUNC02G24210 Oryza punctata OPUNC02G24210 I 0.725
OPUNC04G18500 Oryza punctata OPUNC04G18500 I 0.725
ORGLA02G0228000 Oryza glaberrima ORGLA02G0228000 I 0.725
ORGLA04G0178600 Oryza glaberrima ORGLA04G0178600 I 0.725
ORUFI04G22400 Oryza rufipogon ORUFI04G22400 I 0.725
OS02G0656600 Oryza sativa OS02G0656600 I 0.725
OS04G0549700 Oryza sativa OS04G0549700 I 0.725
Sb06g024530 Sorghum bicolor Sb06g024530 I 0.725
Si010703m.g Setaria italica Si010703m.g I 0.725
Traes_2AL_45E6314EF Triticum aestivum Traes_2AL_45E6314EF I 0.725
Traes_2BL_593E1CCC2 Triticum aestivum Traes_2BL_593E1CCC2 I 0.725
Pavir.Ga01095 Panicum virgatum Pavir.Ga01095 I 0.725
Pavir.J17742 Panicum virgatum Pavir.J17742 I 0.725
Bo9g011210 Brassica oleracea Bo9g011210 I 0.724
Bra036552 Brassica rapa Bra036552 I 0.724
Thhalv10004870m.g Eutrema salsugineum Thhalv10004870m.g I 0.724
GSMUA_Achr7G09450_001 Musa acuminata GSMUA_Achr7G09450_001 I 0.723
GSMUA_Achr1G01620_001 Musa acuminata GSMUA_Achr1G01620_001 I 0.720
BRADI3G50620 Brachypodium distachyon BRADI3G50620 I 0.718
PGSC0003DMG400018581 Solanum tuberosum PGSC0003DMG400018581 I 0.718
Lus10038270.g Linum usitatissimum Lus10038270.g I 0.718
chr1.CM0171.140.nc Lotus japonicus chr1.CM0171.140.nc I 0.717
MLOC_75601 Hordeum vulgare MLOC_75601 I 0.715
Traes_6DL_901793D6D Triticum aestivum Traes_6DL_901793D6D I 0.715
Ca_18948 Cicer arietinum Ca_18948 I 0.714
Lus10025834.g Linum usitatissimum Lus10025834.g I 0.714
chr3.LjT42M03.60.nd Lotus japonicus chr3.LjT42M03.60.nd I 0.707
GLYMA13G43210 Glycine max GLYMA13G43210 I 0.705
GLYMA15G02130 Glycine max GLYMA15G02130 I 0.705
TCM_005639 Theobroma cacao TCM_005639 I 0.705
Lus10004738.g Linum usitatissimum Lus10004738.g I 0.703
Lus10007799.g Linum usitatissimum Lus10007799.g I 0.703
PGSC0003DMG400004825 Solanum tuberosum PGSC0003DMG400004825 I 0.702
Solyc08g078410.1 Solanum lycopersicum Solyc08g078410.1 I 0.702
Solyc08g078420.1 Solanum lycopersicum Solyc08g078420.1 I 0.702
ERF035 Arabidopsis thaliana AT3G60490 D 0.700
fgenesh2_kg.5__2513__AT3G60490.1 Arabidopsis lyrata fgenesh2_kg.5__2513__AT3G60490.1 I 0.700
30174.m008790 Ricinus communis 30174.m008790 I 0.700
ERF034 Arabidopsis thaliana AT2G44940 D 0.699
fgenesh2_kg.4__2683__AT2G44940.1 Arabidopsis lyrata fgenesh2_kg.4__2683__AT2G44940.1 I 0.699
GSMUA_Achr1G04350_001 Musa acuminata GSMUA_Achr1G04350_001 I 0.699
PGSC0003DMG400004826 Solanum tuberosum PGSC0003DMG400004826 I 0.699
PRUPE_ppa009812mg Prunus persica PRUPE_ppa009812mg I 0.699
Solyc06g066540.1 Solanum lycopersicum Solyc06g066540.1 I 0.699
Pm017610 Prunus mume Pm017610 I 0.699
Bostr.25993s0277 Boechera stricta Bostr.25993s0277 I 0.699
Cagra.0239s0048 Capsella grandiflora Cagra.0239s0048 I 0.699
Carubv10023699m.g Capsella rubella Carubv10023699m.g I 0.699
Eucgr.F03062 Eucalyptus grandis Eucgr.F03062 I 0.699
evm.TU.supercontig_101.39 Carica papaya evm.TU.supercontig_101.39 I 0.699
SapurV1A.0033s0230 Salix purpurea SapurV1A.0033s0230 I 0.699
Thhalv10001792m.g Eutrema salsugineum Thhalv10001792m.g I 0.699
POPTR_0002s14210 Populus trichocarpa POPTR_0002s14210 I 0.698
POPTR_0006s25500 Populus trichocarpa POPTR_0006s25500 I 0.698
Gorai.004G165300 Gossypium raimondii Gorai.004G165300 I 0.698
Lus10001601.g Linum usitatissimum Lus10001601.g I 0.698
Lus10002801.g Linum usitatissimum Lus10002801.g I 0.698
SapurV1A.0272s0090 Salix purpurea SapurV1A.0272s0090 I 0.698
ORUFI10G19670 Oryza rufipogon ORUFI10G19670 I 0.697
28353.m000054 Ricinus communis 28353.m000054 I 0.697
Gorai.009G050200 Gossypium raimondii Gorai.009G050200 I 0.697
Bo3g171090 Brassica oleracea Bo3g171090 I 0.696
Bo7g115860 Brassica oleracea Bo7g115860 I 0.696
Bra034535 Brassica rapa Bra034535 I 0.696
Bra037041 Brassica rapa Bra037041 I 0.696
Cucsa.359390 Cucumis sativus Cucsa.359390 I 0.696
mgf022971m Mimulus guttatus mgf022971m I 0.696
Bostr.13158s0050 Boechera stricta Bostr.13158s0050 I 0.696
Thhalv10026204m.g Eutrema salsugineum Thhalv10026204m.g I 0.696
TCM_028851 Theobroma cacao TCM_028851 I 0.695
cassava33300.m1 Manihot esculenta cassava33300.m1 I 0.695
Cagra.3527s0003 Capsella grandiflora Cagra.3527s0003 I 0.695
Carubv10017799m.g Capsella rubella Carubv10017799m.g I 0.695
Bo3g037480 Brassica oleracea Bo3g037480 I 0.693
Bo4g024220 Brassica oleracea Bo4g024220 I 0.693
Bo4g195280 Brassica oleracea Bo4g195280 I 0.693
Bra000366 Brassica rapa Bra000366 I 0.693
Bra004878 Brassica rapa Bra004878 I 0.693
Bra040333 Brassica rapa Bra040333 I 0.693
SELMODRAFT_104978 Selaginella moellendorffii SELMODRAFT_104978 I 0.692
SELMODRAFT_125385 Selaginella moellendorffii SELMODRAFT_125385 I 0.692
PGSC0003DMG400002620 Solanum tuberosum PGSC0003DMG400002620 I 0.691
Pm019386 Prunus mume Pm019386 I 0.691
30146.m003535 Ricinus communis 30146.m003535 I 0.690
ERF043 Arabidopsis thaliana AT4G32800 D 0.689
MTR_5g012910 Medicago truncatula MTR_5g012910 I 0.689
scaffold_700899.1 Arabidopsis lyrata scaffold_700899.1 I 0.689
Solyc03g120840.1 Solanum lycopersicum Solyc03g120840.1 I 0.689
cassava19875.m1 Manihot esculenta cassava19875.m1 I 0.689
cassava19912.m1 Manihot esculenta cassava19912.m1 I 0.689
Bostr.7867s1130 Boechera stricta Bostr.7867s1130 I 0.689
Cagra.4093s0009 Capsella grandiflora Cagra.4093s0009 I 0.689
Carubv10006567m.g Capsella rubella Carubv10006567m.g I 0.689
gene08876-v1.0-hybrid Fragaria vesca gene08876-v1.0-hybrid I 0.689
TCM_014892 Theobroma cacao TCM_014892 I 0.688
Aquca_011_00566 Aquilegia coerulea Aquca_011_00566 I 0.688
Gorai.003G175100 Gossypium raimondii Gorai.003G175100 I 0.688
Gorai.009G136500 Gossypium raimondii Gorai.009G136500 I 0.688
Lus10038607.g Linum usitatissimum Lus10038607.g I 0.688
PRUPE_ppa010340mg Prunus persica PRUPE_ppa010340mg I 0.687
Pm023417 Prunus mume Pm023417 I 0.687
evm.TU.supercontig_89.73 Carica papaya evm.TU.supercontig_89.73 I 0.686
SapurV1A.0805s0100 Salix purpurea SapurV1A.0805s0100 I 0.685
PK25970.1 Cannabis sativa PK25970.1 I 0.685
Bo3g028500 Brassica oleracea Bo3g028500 I 0.684
Bra023026 Brassica rapa Bra023026 I 0.684
GLYMA16G32330 Glycine max GLYMA16G32330 I 0.684
cassava4979.m1 Manihot esculenta cassava4979.m1 I 0.683
Ciclev10021740m.g Citrus clementina Ciclev10021740m.g I 0.683
orange1.1g024791m.g Citrus sinensis orange1.1g024791m.g I 0.683
OB04G27840 Oryza brachyantha OB04G27840 I 0.681
PGSC0003DMG400026461 Solanum tuberosum PGSC0003DMG400026461 I 0.681
Solyc12g044390.1 Solanum lycopersicum Solyc12g044390.1 I 0.681
VIT_14s0006g02290 Vitis vinifera VIT_14s0006g02290 I 0.680
Ca_12765 Cicer arietinum Ca_12765 I 0.679
gene04810-v1.0-hybrid Fragaria vesca gene04810-v1.0-hybrid I 0.679
LjT33K05.50.nd Lotus japonicus LjT33K05.50.nd I 0.679
TCM_015930 Theobroma cacao TCM_015930 I 0.678
VIT_09s0002g03940 Vitis vinifera VIT_09s0002g03940 I 0.678
Bostr.26326s0067 Boechera stricta Bostr.26326s0067 I 0.678
BGIOSGA016883 Oryza indica BGIOSGA016883 I 0.677
BGIOSGA016884 Oryza indica BGIOSGA016884 I 0.677
LPERR02G21590 Leersia perrieri LPERR02G21590 I 0.677
MLOC_3095 Hordeum vulgare MLOC_3095 I 0.677
OBART04G20820 Oryza barthii OBART04G20820 I 0.677
OGLUM02G27070 Oryza glumaepatula OGLUM02G27070 I 0.677
OGLUM04G20760 Oryza glumaepatula OGLUM04G20760 I 0.677
OGLUM04G20790 Oryza glumaepatula OGLUM04G20790 I 0.677
OMERI02G25910 Oryza meridionalis OMERI02G25910 I 0.677
OMERI04G17270 Oryza meridionalis OMERI04G17270 I 0.677
OMERI04G17290 Oryza meridionalis OMERI04G17290 I 0.677
ONIVA02G28990 Oryza nivara ONIVA02G28990 I 0.677
ONIVA04G19060 Oryza nivara ONIVA04G19060 I 0.677
ONIVA04G19090 Oryza nivara ONIVA04G19090 I 0.677
OPUNC02G24230 Oryza punctata OPUNC02G24230 I 0.677
OPUNC04G18520 Oryza punctata OPUNC04G18520 I 0.677
OPUNC04G18530 Oryza punctata OPUNC04G18530 I 0.677
ORGLA04G0178700 Oryza glaberrima ORGLA04G0178700 I 0.677
ORGLA04G0179000 Oryza glaberrima ORGLA04G0179000 I 0.677
ORUFI02G28010 Oryza rufipogon ORUFI02G28010 I 0.677
ORUFI04G22410 Oryza rufipogon ORUFI04G22410 I 0.677
ORUFI04G22430 Oryza rufipogon ORUFI04G22430 I 0.677
OS02G0657000 Oryza sativa OS02G0657000 I 0.677
OS04G0549800 Oryza sativa OS04G0549800 I 0.677
OS04G0550200 Oryza sativa OS04G0550200 I 0.677
Si012254m.g Setaria italica Si012254m.g I 0.677
Traes_6DL_3019F176A Triticum aestivum Traes_6DL_3019F176A I 0.677
gene08873-v1.0-hybrid Fragaria vesca gene08873-v1.0-hybrid I 0.677
Pavir.Ga01093 Panicum virgatum Pavir.Ga01093 I 0.677
Pavir.Gb01128 Panicum virgatum Pavir.Gb01128 I 0.677