Eucgr.E00529 (Eucalyptus grandis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Eucgr.E00529 T008144_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.776 0.880
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.776 0.880
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.776 0.880
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.776 0.880
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.766 0.860
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.766 0.860
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.741 0.860
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.741 0.860
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.741 0.860
DREB1G
M01635_2.00 		Oryza sativa
NYGCCGACAN
NTGTCGGCRN		 PBM
Weirauch et al.(2014)
pTH8352 		0.735 0.780
DREB1G
M09707_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1G_01 		0.735 0.780
DREB1F
M00962_2.00 		Arabidopsis thaliana
NRCCGACNN
NNGTCGGYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana 		0.721 0.780
DREB1F
M00840_2.00 		Arabidopsis thaliana
NRYCGACNN
NNGTCGRYN		 PBM
Franco-Zorrilla et al.(2014)
DDF1 		0.721 0.780
DDF1
M00964_2.00 		Arabidopsis lyrata
NRYCGACDY
RHGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata 		0.721 0.780
DREB1F
M06564_2.00 		Arabidopsis thaliana
NHNHYGYCGACATNN
NNATGTCGRCRDNDN		 Dap-seq
OMalley et al.(2016)
DDF1_col_a 		0.721 0.780
DREB1F
M06565_2.00 		Arabidopsis thaliana
HNDNNRYCGACAH
DTGTCGRYNNHND		 Dap-seq
OMalley et al.(2016)
DDF1_colamp_a 		0.721 0.780
DREB1F
M09701_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1F_03 		0.721 0.780
ddf2
M00965_2.00 		Arabidopsis lyrata
NRYCGACAT
ATGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_lyrata 		0.692 0.780
DREB1E
M09709_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1E_01 		0.686 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.E00529.1 AP2 68 119

Links

Other AP2 family TFs
Other Eucalyptus grandis TFs

200 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.814
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I 0.810
mgf026642m Mimulus guttatus mgf026642m I 0.805
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.800
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.799
PK23332.1 Cannabis sativa PK23332.1 I 0.799
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.797
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.797
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.797
TCM_016175 Theobroma cacao TCM_016175 I 0.795
Cla011674 Citrullus lanatus Cla011674 I 0.792
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.791
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.791
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.788
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.788
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.786
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.786
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.785
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I 0.785
Cla006315 Citrullus lanatus Cla006315 I 0.784
MTR_6g466130 Medicago truncatula MTR_6g466130 I 0.781
MDP0000154764 Malus domestica MDP0000154764 I 0.780
MDP0000198054 Malus domestica MDP0000198054 I 0.779
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.778
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I 0.777
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.777
Pm023775 Prunus mume Pm023775 I 0.777
DREB1A Arabidopsis thaliana AT4G25480 D 0.776
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.776
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.776
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I 0.775
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.772
30147.m014313 Ricinus communis 30147.m014313 I 0.771
CBF2 Arabidopsis lyrata fgenesh2_kg.7__1712__AT4G25470.1 I 0.770
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.769
VIT_02s0025g04460 Vitis vinifera VIT_02s0025g04460 I 0.768
Cla002362 Citrullus lanatus Cla002362 I 0.767
Cucsa.302750 Cucumis sativus Cucsa.302750 I 0.767
DREB1D Arabidopsis thaliana AT5G51990 D 0.766
Bo9g104770 Brassica oleracea Bo9g104770 I 0.766
Bra028290 Brassica rapa Bra028290 I 0.766
PRUPE_ppa010909mg Prunus persica PRUPE_ppa010909mg I 0.766
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.766
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.766
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.766
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.766
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.766
GSMUA_Achr11G21630_001 Musa acuminata GSMUA_Achr11G21630_001 I 0.763
PRUPE_ppa021197mg Prunus persica PRUPE_ppa021197mg I 0.762
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I 0.762
Pm023769 Prunus mume Pm023769 I 0.762
Bostr.7867s0359 Boechera stricta Bostr.7867s0359 I 0.762
Bostr.7867s0361 Boechera stricta Bostr.7867s0361 I 0.762
Cagra.28753s0001 Capsella grandiflora Cagra.28753s0001 I 0.762
Carubv10005709m.g Capsella rubella Carubv10005709m.g I 0.762
Pm023772 Prunus mume Pm023772 I 0.758
Ciclev10021923m.g Citrus clementina Ciclev10021923m.g I 0.758
MTR_6g465510 Medicago truncatula MTR_6g465510 I 0.757
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.756
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I 0.756
mgf017136m Mimulus guttatus mgf017136m I 0.756
30190.m011120 Ricinus communis 30190.m011120 I 0.754
MTR_6g465690 Medicago truncatula MTR_6g465690 I 0.753
MTR_6g466000 Medicago truncatula MTR_6g466000 I 0.753
PGSC0003DMG400012525 Solanum tuberosum PGSC0003DMG400012525 I 0.752
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.749
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.746
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.746
Gorai.006G046200 Gossypium raimondii Gorai.006G046200 I 0.745
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.745
mgf026339m Mimulus guttatus mgf026339m I 0.744
GLYMA12G30740 Glycine max GLYMA12G30740 I 0.742
MTR_6g465460 Medicago truncatula MTR_6g465460 I 0.742
60638.m00016 Ricinus communis 60638.m00016 I 0.742
DREB1C Arabidopsis thaliana AT4G25470 D 0.741
BRADI3G51630 Brachypodium distachyon BRADI3G51630 I 0.740
MLOC_75886 Hordeum vulgare MLOC_75886 I 0.740
mgf019061m Mimulus guttatus mgf019061m I 0.740
Carubv10006965m.g Capsella rubella Carubv10006965m.g I 0.739
GLYMA10G38440 Glycine max GLYMA10G38440 I 0.738
GLYMA12G09130 Glycine max GLYMA12G09130 I 0.738
MTR_8g006410 Medicago truncatula MTR_8g006410 I 0.738
POPTR_0001s08720 Populus trichocarpa POPTR_0001s08720 I 0.738
Eucgr.A02818 Eucalyptus grandis Eucgr.A02818 I 0.738
SapurV1A.0282s0070 Salix purpurea SapurV1A.0282s0070 I 0.738
30190.m011119 Ricinus communis 30190.m011119 I 0.736
DREB1G Oryza indica BGIOSGA008804 I 0.735
GRMZM2G137341 Zea mays GRMZM2G137341 I 0.735
LPERR02G22610 Leersia perrieri LPERR02G22610 I 0.735
OBART02G27760 Oryza barthii OBART02G27760 I 0.735
OGLUM02G28340 Oryza glumaepatula OGLUM02G28340 I 0.735
OMERI02G26980 Oryza meridionalis OMERI02G26980 I 0.735
ONIVA02G30790 Oryza nivara ONIVA02G30790 I 0.735
OPUNC02G25480 Oryza punctata OPUNC02G25480 I 0.735
ORUFI02G29230 Oryza rufipogon ORUFI02G29230 I 0.735
DREB1G Oryza sativa OS02G0677300 D 0.735
Sb04g031950 Sorghum bicolor Sb04g031950 I 0.735
Pavir.Aa00912 Panicum virgatum Pavir.Aa00912 I 0.735
Pavir.Ab02685 Panicum virgatum Pavir.Ab02685 I 0.735
SapurV1A.0045s0710 Salix purpurea SapurV1A.0045s0710 I 0.735
SapurV1A.0282s0080 Salix purpurea SapurV1A.0282s0080 I 0.735
MTR_6g465420 Medicago truncatula MTR_6g465420 I 0.734
MTR_6g465430 Medicago truncatula MTR_6g465430 I 0.734
LjSGA_037211.1 Lotus japonicus LjSGA_037211.1 I 0.734
GSMUA_Achr8G11980_001 Musa acuminata GSMUA_Achr8G11980_001 I 0.733
MTR_6g465450 Medicago truncatula MTR_6g465450 I 0.733
PGSC0003DMG400004255 Solanum tuberosum PGSC0003DMG400004255 I 0.733
POPTR_0009s14990 Populus trichocarpa POPTR_0009s14990 I 0.733
SapurV1A.0219s0320 Salix purpurea SapurV1A.0219s0320 I 0.733
Aquca_012_00144 Aquilegia coerulea Aquca_012_00144 I 0.732
GLYMA20G29410 Glycine max GLYMA20G29410 I 0.731
MTR_6g465530 Medicago truncatula MTR_6g465530 I 0.731
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I 0.731
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I 0.731
Lus10001871.g Linum usitatissimum Lus10001871.g I 0.730
Lus10006332.g Linum usitatissimum Lus10006332.g I 0.730
Lus10006334.g Linum usitatissimum Lus10006334.g I 0.730
Lus10029601.g Linum usitatissimum Lus10029601.g I 0.730
Lus10029602.g Linum usitatissimum Lus10029602.g I 0.730
GLYMA13G39540 Glycine max GLYMA13G39540 I 0.727
evm.TU.supercontig_5.66 Carica papaya evm.TU.supercontig_5.66 I 0.727
Solyc08g007820.1 Solanum lycopersicum Solyc08g007820.1 I 0.726
Bo01335s010 Brassica oleracea Bo01335s010 I 0.725
Bra016763 Brassica rapa Bra016763 I 0.725
Si018262m.g Setaria italica Si018262m.g I 0.725
Aquca_013_00435 Aquilegia coerulea Aquca_013_00435 I 0.725
Aquca_013_00436 Aquilegia coerulea Aquca_013_00436 I 0.724
Thhalv10009978m.g Eutrema salsugineum Thhalv10009978m.g I 0.724
PGSC0003DMG400012524 Solanum tuberosum PGSC0003DMG400012524 I 0.723
PRUPE_ppa017761mg Prunus persica PRUPE_ppa017761mg I 0.722
DREB1F Arabidopsis thaliana AT1G12610 D 0.721
DDF1 Arabidopsis lyrata fgenesh2_kg.1__1363__AT1G12610.1 D 0.721
GLYMA01G42500 Glycine max GLYMA01G42500 I 0.721
Ca_18948 Cicer arietinum Ca_18948 I 0.719
Bo8g108050 Brassica oleracea Bo8g108050 I 0.718
Bra026963 Brassica rapa Bra026963 I 0.718
MTR_1g101600 Medicago truncatula MTR_1g101600 I 0.718
cassava17064.m1 Manihot esculenta cassava17064.m1 I 0.716
VIT_11s0016g02140 Vitis vinifera VIT_11s0016g02140 I 0.715
orange1.1g026103m.g Citrus sinensis orange1.1g026103m.g I 0.715
MTR_6g465850 Medicago truncatula MTR_6g465850 I 0.713
Cagra.0568s0171 Capsella grandiflora Cagra.0568s0171 I 0.713
Carubv10010303m.g Capsella rubella Carubv10010303m.g I 0.713
chr3.LjT42M03.60.nd Lotus japonicus chr3.LjT42M03.60.nd I 0.712
POPTR_0004s19820 Populus trichocarpa POPTR_0004s19820 I 0.711
Bostr.13671s0200 Boechera stricta Bostr.13671s0200 I 0.711
MTR_5g010930 Medicago truncatula MTR_5g010930 I 0.709
GSMUA_Achr7G05900_001 Musa acuminata GSMUA_Achr7G05900_001 I 0.707
Pm019386 Prunus mume Pm019386 I 0.707
GLYMA17G14111 Glycine max GLYMA17G14111 I 0.706
AMTR_s00069p00141520 Amborella trichopoda AMTR_s00069p00141520 I 0.705
MTR_2g085015 Medicago truncatula MTR_2g085015 I 0.705
Lus10017829.g Linum usitatissimum Lus10017829.g I 0.703
Lus10031657.g Linum usitatissimum Lus10031657.g I 0.703
Lus10027412.g Linum usitatissimum Lus10027412.g I 0.700
PGSC0003DMG400038366 Solanum tuberosum PGSC0003DMG400038366 I 0.697
Ca_04504 Cicer arietinum Ca_04504 I 0.696
mgf016974m Mimulus guttatus mgf016974m I 0.696
mgf018631m Mimulus guttatus mgf018631m I 0.696
mgf018934m Mimulus guttatus mgf018934m I 0.696
mgf022408m Mimulus guttatus mgf022408m I 0.696
AMTR_s00095p00096190 Amborella trichopoda AMTR_s00095p00096190 I 0.695
GLYMA05G03560 Glycine max GLYMA05G03560 I 0.695
cassava41218.m1 Manihot esculenta cassava41218.m1 I 0.695
Eucgr.A02830 Eucalyptus grandis Eucgr.A02830 I 0.694
GLYMA16G32330 Glycine max GLYMA16G32330 I 0.693
ddf2 Arabidopsis lyrata fgenesh2_kg.2__175__AT1G63030.1 D 0.692
MTR_4g102660 Medicago truncatula MTR_4g102660 I 0.692
PRUPE_ppa014628mg Prunus persica PRUPE_ppa014628mg N 0.692
Solyc08g007830.1 Solanum lycopersicum Solyc08g007830.1 I 0.692
Bostr.22157s0019 Boechera stricta Bostr.22157s0019 I 0.692
Thhalv10023865m.g Eutrema salsugineum Thhalv10023865m.g I 0.692
Bra019777 Brassica rapa Bra019777 I 0.691
GLYMA11G19341 Glycine max GLYMA11G19341 I 0.690
Aquca_013_00434 Aquilegia coerulea Aquca_013_00434 I 0.688
Solyc01g009440.1 Solanum lycopersicum Solyc01g009440.1 I 0.687
Eucgr.A02820 Eucalyptus grandis Eucgr.A02820 I 0.687
Eucgr.A02824 Eucalyptus grandis Eucgr.A02824 I 0.687
Eucgr.A02826 Eucalyptus grandis Eucgr.A02826 I 0.687
Eucgr.A02832 Eucalyptus grandis Eucgr.A02832 I 0.687
DREB1E Oryza indica BGIOSGA016950 I 0.686
LPERR04G18190 Leersia perrieri LPERR04G18190 I 0.686
OBART04G22220 Oryza barthii OBART04G22220 I 0.686
OGLUM04G22260 Oryza glumaepatula OGLUM04G22260 I 0.686
OMERI04G18770 Oryza meridionalis OMERI04G18770 I 0.686
ONIVA04G20840 Oryza nivara ONIVA04G20840 I 0.686
OPUNC04G19970 Oryza punctata OPUNC04G19970 I 0.686
ORGLA04G0192900 Oryza glaberrima ORGLA04G0192900 I 0.686
ORUFI04G23890 Oryza rufipogon ORUFI04G23890 I 0.686
DREB1E Oryza sativa OS04G0572400 D 0.686
Ca_08732 Cicer arietinum Ca_08732 I 0.686
Aquca_122_00012 Aquilegia coerulea Aquca_122_00012 I 0.686
PGSC0003DMG400012526 Solanum tuberosum PGSC0003DMG400012526 I 0.683
Eucgr.A02822 Eucalyptus grandis Eucgr.A02822 I 0.683
Gorai.008G280600 Gossypium raimondii Gorai.008G280600 I 0.683
Eucgr.A02831 Eucalyptus grandis Eucgr.A02831 I 0.681
Bo5g016750 Brassica oleracea Bo5g016750 I 0.678
Eucgr.A02821 Eucalyptus grandis Eucgr.A02821 I 0.677
Eucgr.A02827 Eucalyptus grandis Eucgr.A02827 I 0.677
Eucgr.A02834 Eucalyptus grandis Eucgr.A02834 I 0.677