GLYMA11G19341 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA11G19341 T001911_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.733 0.706
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.733 0.706
ddf2
M00965_2.00 		Arabidopsis lyrata
NRYCGACAT
ATGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_lyrata 		0.727 0.804
DREB1F
M00962_2.00 		Arabidopsis thaliana
NRCCGACNN
NNGTCGGYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana 		0.709 0.686
DREB1F
M00840_2.00 		Arabidopsis thaliana
NRYCGACNN
NNGTCGRYN		 PBM
Franco-Zorrilla et al.(2014)
DDF1 		0.709 0.686
DDF1
M00964_2.00 		Arabidopsis lyrata
NRYCGACDY
RHGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata 		0.709 0.686
DREB1F
M06564_2.00 		Arabidopsis thaliana
NHNHYGYCGACATNN
NNATGTCGRCRDNDN		 Dap-seq
OMalley et al.(2016)
DDF1_col_a 		0.709 0.686
DREB1F
M06565_2.00 		Arabidopsis thaliana
HNDNNRYCGACAH
DTGTCGRYNNHND		 Dap-seq
OMalley et al.(2016)
DDF1_colamp_a 		0.709 0.686
DREB1F
M09701_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1F_03 		0.709 0.686
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.694 0.647
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.694 0.647
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.694 0.647
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA11G19341.1 AP2 63 114

Links

Other AP2 family TFs
Other Glycine max TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA12G30740 Glycine max GLYMA12G30740 I 0.802
MTR_2g085015 Medicago truncatula MTR_2g085015 I 0.797
GLYMA13G39540 Glycine max GLYMA13G39540 I 0.787
GLYMA12G09130 Glycine max GLYMA12G09130 I 0.774
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I 0.762
30190.m011119 Ricinus communis 30190.m011119 I 0.762
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.762
VIT_02s0025g04460 Vitis vinifera VIT_02s0025g04460 I 0.749
VIT_06s0061g01400 Vitis vinifera VIT_06s0061g01400 I 0.746
SapurV1A.0045s0710 Salix purpurea SapurV1A.0045s0710 I 0.741
SapurV1A.0282s0080 Salix purpurea SapurV1A.0282s0080 I 0.741
GSMUA_Achr11G21630_001 Musa acuminata GSMUA_Achr11G21630_001 I 0.736
POPTR_0001s08720 Populus trichocarpa POPTR_0001s08720 I 0.736
60638.m00016 Ricinus communis 60638.m00016 I 0.736
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.736
SapurV1A.0282s0070 Salix purpurea SapurV1A.0282s0070 I 0.736
DREB1D Arabidopsis thaliana AT5G51990 D 0.733
Bo9g104770 Brassica oleracea Bo9g104770 I 0.733
Bra028290 Brassica rapa Bra028290 I 0.733
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.733
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.733
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.733
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.733
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.733
Cucsa.302750 Cucumis sativus Cucsa.302750 I 0.732
ddf2 Arabidopsis lyrata fgenesh2_kg.2__175__AT1G63030.1 D 0.727
cassava17064.m1 Manihot esculenta cassava17064.m1 I 0.727
Bostr.22157s0019 Boechera stricta Bostr.22157s0019 I 0.727
Thhalv10023865m.g Eutrema salsugineum Thhalv10023865m.g I 0.727
MDP0000198054 Malus domestica MDP0000198054 I 0.725
PRUPE_ppa010909mg Prunus persica PRUPE_ppa010909mg I 0.723
Lus10001871.g Linum usitatissimum Lus10001871.g I 0.723
Lus10006332.g Linum usitatissimum Lus10006332.g I 0.723
Lus10006334.g Linum usitatissimum Lus10006334.g I 0.723
Lus10029601.g Linum usitatissimum Lus10029601.g I 0.723
Lus10029602.g Linum usitatissimum Lus10029602.g I 0.723
Cla002362 Citrullus lanatus Cla002362 I 0.721
Bra027612 Brassica rapa Bra027612 I 0.719
POPTR_0004s19820 Populus trichocarpa POPTR_0004s19820 I 0.719
POPTR_0009s14990 Populus trichocarpa POPTR_0009s14990 I 0.719
Aquca_122_00013 Aquilegia coerulea Aquca_122_00013 I 0.719
SapurV1A.0219s0320 Salix purpurea SapurV1A.0219s0320 I 0.719
Aquca_122_00012 Aquilegia coerulea Aquca_122_00012 I 0.718
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I 0.715
Pm023775 Prunus mume Pm023775 I 0.715
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.715
MDP0000154764 Malus domestica MDP0000154764 I 0.715
Pm023772 Prunus mume Pm023772 I 0.711
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.711
DREB1F Arabidopsis thaliana AT1G12610 D 0.709
DDF1 Arabidopsis lyrata fgenesh2_kg.1__1363__AT1G12610.1 D 0.709
MTR_5g010930 Medicago truncatula MTR_5g010930 I 0.709
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.708
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.708
Cagra.23885s0001 Capsella grandiflora Cagra.23885s0001 I 0.708
Carubv10021910m.g Capsella rubella Carubv10021910m.g I 0.708
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.708
Bo01335s010 Brassica oleracea Bo01335s010 I 0.707
Bra016763 Brassica rapa Bra016763 I 0.707
GSMUA_Achr8G11980_001 Musa acuminata GSMUA_Achr8G11980_001 I 0.707
chr2.CM0304.640.nd Lotus japonicus chr2.CM0304.640.nd I 0.707
Ca_08732 Cicer arietinum Ca_08732 I 0.706
30190.m011120 Ricinus communis 30190.m011120 I 0.705
Bo5g016750 Brassica oleracea Bo5g016750 I 0.704
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.704
Thhalv10009978m.g Eutrema salsugineum Thhalv10009978m.g I 0.704
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.702
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.702
mgf026642m Mimulus guttatus mgf026642m I 0.702
Cagra.0568s0171 Capsella grandiflora Cagra.0568s0171 I 0.702
Carubv10010303m.g Capsella rubella Carubv10010303m.g I 0.702
Cla006315 Citrullus lanatus Cla006315 I 0.701
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.701
Cla011674 Citrullus lanatus Cla011674 I 0.700
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I 0.699
Bo8g108050 Brassica oleracea Bo8g108050 I 0.698
Bra026963 Brassica rapa Bra026963 I 0.698
GLYMA17G14111 Glycine max GLYMA17G14111 I 0.698
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.698
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.698
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.697
VIT_11s0016g02140 Vitis vinifera VIT_11s0016g02140 I 0.697
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.695
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.695
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.695
PK23332.1 Cannabis sativa PK23332.1 I 0.695
DREB1C Arabidopsis thaliana AT4G25470 D 0.694
AMTR_s00095p00096190 Amborella trichopoda AMTR_s00095p00096190 I 0.693
PGSC0003DMG400012525 Solanum tuberosum PGSC0003DMG400012525 I 0.693
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.693
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I 0.693
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.692
PRUPE_ppa021197mg Prunus persica PRUPE_ppa021197mg I 0.690
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.690
Pm023769 Prunus mume Pm023769 I 0.690
Bostr.13671s0200 Boechera stricta Bostr.13671s0200 I 0.690
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.690
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.688
Aquca_013_00435 Aquilegia coerulea Aquca_013_00435 I 0.688
GLYMA05G03560 Glycine max GLYMA05G03560 I 0.687
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.686
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I 0.686
PRUPE_ppa017761mg Prunus persica PRUPE_ppa017761mg I 0.685
MTR_4g102660 Medicago truncatula MTR_4g102660 I 0.684
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.682
mgf017136m Mimulus guttatus mgf017136m I 0.682
30147.m014313 Ricinus communis 30147.m014313 I 0.681
LjSGA_037211.1 Lotus japonicus LjSGA_037211.1 I 0.681
mgf026339m Mimulus guttatus mgf026339m I 0.680
Aquca_013_00436 Aquilegia coerulea Aquca_013_00436 I 0.678