Pm023772 (Prunus mume)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pm023772 T006633_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1F
M00962_2.00 		Arabidopsis thaliana
NRCCGACNN
NNGTCGGYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana 		0.735 0.745
DREB1F
M00840_2.00 		Arabidopsis thaliana
NRYCGACNN
NNGTCGRYN		 PBM
Franco-Zorrilla et al.(2014)
DDF1 		0.735 0.745
DDF1
M00964_2.00 		Arabidopsis lyrata
NRYCGACDY
RHGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata 		0.735 0.745
DREB1F
M06564_2.00 		Arabidopsis thaliana
NHNHYGYCGACATNN
NNATGTCGRCRDNDN		 Dap-seq
OMalley et al.(2016)
DDF1_col_a 		0.735 0.745
DREB1F
M06565_2.00 		Arabidopsis thaliana
HNDNNRYCGACAH
DTGTCGRYNNHND		 Dap-seq
OMalley et al.(2016)
DDF1_colamp_a 		0.735 0.745
DREB1F
M09701_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1F_03 		0.735 0.745
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.733 0.745
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.733 0.745
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.733 0.745
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.733 0.745
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.733 0.745
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.733 0.745
DREB1G
M01635_2.00 		Oryza sativa
NYGCCGACAN
NTGTCGGCRN		 PBM
Weirauch et al.(2014)
pTH8352 		0.706 0.686
DREB1G
M09707_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1G_01 		0.706 0.686
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.698 0.725
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.698 0.725
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.698 0.725
ddf2
M00965_2.00 		Arabidopsis lyrata
NRYCGACAT
ATGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_lyrata 		0.682 0.686
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm023772 AP2 61 113

Links

Other AP2 family TFs
Other Prunus mume TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa010909mg Prunus persica PRUPE_ppa010909mg I 0.867
MDP0000198054 Malus domestica MDP0000198054 I 0.852
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I 0.842
Pm023775 Prunus mume Pm023775 I 0.842
MDP0000154764 Malus domestica MDP0000154764 I 0.839
PRUPE_ppa017761mg Prunus persica PRUPE_ppa017761mg I 0.823
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I 0.823
PRUPE_ppa021197mg Prunus persica PRUPE_ppa021197mg I 0.817
Pm023769 Prunus mume Pm023769 I 0.817
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.814
Cla011674 Citrullus lanatus Cla011674 I 0.812
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.799
VIT_02s0025g04460 Vitis vinifera VIT_02s0025g04460 I 0.791
PGSC0003DMG400012525 Solanum tuberosum PGSC0003DMG400012525 I 0.783
TCM_016175 Theobroma cacao TCM_016175 I 0.780
60638.m00016 Ricinus communis 60638.m00016 I 0.780
Lus10017829.g Linum usitatissimum Lus10017829.g I 0.780
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.775
LjSGA_037211.1 Lotus japonicus LjSGA_037211.1 I 0.775
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.773
Cucsa.302750 Cucumis sativus Cucsa.302750 I 0.773
Ciclev10021923m.g Citrus clementina Ciclev10021923m.g I 0.772
30190.m011120 Ricinus communis 30190.m011120 I 0.770
cassava17064.m1 Manihot esculenta cassava17064.m1 I 0.770
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I 0.770
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.769
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.765
PRUPE_ppa014628mg Prunus persica PRUPE_ppa014628mg N 0.765
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.765
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.765
mgf026642m Mimulus guttatus mgf026642m I 0.763
MTR_5g010930 Medicago truncatula MTR_5g010930 I 0.761
POPTR_0001s08720 Populus trichocarpa POPTR_0001s08720 I 0.760
SapurV1A.0282s0070 Salix purpurea SapurV1A.0282s0070 I 0.760
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.758
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.758
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.758
Solyc08g007820.1 Solanum lycopersicum Solyc08g007820.1 I 0.757
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.757
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.756
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.756
Lus10001871.g Linum usitatissimum Lus10001871.g I 0.756
Lus10006332.g Linum usitatissimum Lus10006332.g I 0.756
Lus10006334.g Linum usitatissimum Lus10006334.g I 0.756
Lus10029601.g Linum usitatissimum Lus10029601.g I 0.756
Lus10029602.g Linum usitatissimum Lus10029602.g I 0.756
PK23332.1 Cannabis sativa PK23332.1 I 0.756
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.755
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.755
GLYMA17G14111 Glycine max GLYMA17G14111 I 0.754
Ca_08732 Cicer arietinum Ca_08732 I 0.754
Cla006315 Citrullus lanatus Cla006315 I 0.754
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I 0.753
PGSC0003DMG400004255 Solanum tuberosum PGSC0003DMG400004255 I 0.747
GSMUA_Achr11G21630_001 Musa acuminata GSMUA_Achr11G21630_001 I 0.746
PGSC0003DMG400012524 Solanum tuberosum PGSC0003DMG400012524 I 0.744
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.744
GLYMA05G03560 Glycine max GLYMA05G03560 I 0.743
Aquca_013_00435 Aquilegia coerulea Aquca_013_00435 I 0.743
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I 0.743
Bo01335s010 Brassica oleracea Bo01335s010 I 0.740
Bra016763 Brassica rapa Bra016763 I 0.740
MTR_4g102660 Medicago truncatula MTR_4g102660 I 0.740
VIT_11s0016g02140 Vitis vinifera VIT_11s0016g02140 I 0.739
30147.m014313 Ricinus communis 30147.m014313 I 0.739
mgf019061m Mimulus guttatus mgf019061m I 0.739
mgf017136m Mimulus guttatus mgf017136m I 0.738
GLYMA12G30740 Glycine max GLYMA12G30740 I 0.736
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.736
DREB1F Arabidopsis thaliana AT1G12610 D 0.735
DDF1 Arabidopsis lyrata fgenesh2_kg.1__1363__AT1G12610.1 D 0.735
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.735
MTR_6g466130 Medicago truncatula MTR_6g466130 I 0.734
Aquca_013_00436 Aquilegia coerulea Aquca_013_00436 I 0.734
DREB1A Arabidopsis thaliana AT4G25480 D 0.733
DREB1D Arabidopsis thaliana AT5G51990 D 0.733
Bo9g104770 Brassica oleracea Bo9g104770 I 0.733
Bra028290 Brassica rapa Bra028290 I 0.733
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.733
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.733
30190.m011119 Ricinus communis 30190.m011119 I 0.733
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.733
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.733
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.733
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.733
SapurV1A.0045s0710 Salix purpurea SapurV1A.0045s0710 I 0.732
SapurV1A.0282s0080 Salix purpurea SapurV1A.0282s0080 I 0.732
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.729
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I 0.729
Bostr.7867s0359 Boechera stricta Bostr.7867s0359 I 0.729
Bostr.7867s0361 Boechera stricta Bostr.7867s0361 I 0.729
Cagra.28753s0001 Capsella grandiflora Cagra.28753s0001 I 0.729
Carubv10005709m.g Capsella rubella Carubv10005709m.g I 0.729
orange1.1g026103m.g Citrus sinensis orange1.1g026103m.g I 0.729
POPTR_0009s14990 Populus trichocarpa POPTR_0009s14990 I 0.728
Cagra.0568s0171 Capsella grandiflora Cagra.0568s0171 I 0.728
Carubv10010303m.g Capsella rubella Carubv10010303m.g I 0.728
SapurV1A.0219s0320 Salix purpurea SapurV1A.0219s0320 I 0.728
CBF2 Arabidopsis lyrata fgenesh2_kg.7__1712__AT4G25470.1 I 0.727
Aquca_012_00144 Aquilegia coerulea Aquca_012_00144 I 0.726
Bostr.13671s0200 Boechera stricta Bostr.13671s0200 I 0.725
Cla002362 Citrullus lanatus Cla002362 I 0.724
Thhalv10009978m.g Eutrema salsugineum Thhalv10009978m.g I 0.724
Solyc08g007830.1 Solanum lycopersicum Solyc08g007830.1 I 0.723
Pm023777 Prunus mume Pm023777 N 0.722
Carubv10006965m.g Capsella rubella Carubv10006965m.g I 0.722
GLYMA13G39540 Glycine max GLYMA13G39540 I 0.721
Bo8g108050 Brassica oleracea Bo8g108050 I 0.719
Bra026963 Brassica rapa Bra026963 I 0.719
cassava41218.m1 Manihot esculenta cassava41218.m1 I 0.719
GLYMA01G42500 Glycine max GLYMA01G42500 I 0.718
Aquca_013_00434 Aquilegia coerulea Aquca_013_00434 I 0.718
GSMUA_Achr8G11980_001 Musa acuminata GSMUA_Achr8G11980_001 I 0.716
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.716
MTR_2g085015 Medicago truncatula MTR_2g085015 I 0.715
MTR_6g465420 Medicago truncatula MTR_6g465420 I 0.715
MTR_6g465430 Medicago truncatula MTR_6g465430 I 0.715
PGSC0003DMG400012526 Solanum tuberosum PGSC0003DMG400012526 I 0.714
VIT_06s0061g01400 Vitis vinifera VIT_06s0061g01400 I 0.714
MTR_5g010910 Medicago truncatula MTR_5g010910 N 0.713
MTR_5g010940 Medicago truncatula MTR_5g010940 N 0.713
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.713
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.713
Gorai.006G046200 Gossypium raimondii Gorai.006G046200 I 0.713
GLYMA11G19341 Glycine max GLYMA11G19341 I 0.711
GLYMA12G09130 Glycine max GLYMA12G09130 I 0.711
BRADI3G51630 Brachypodium distachyon BRADI3G51630 I 0.709
MLOC_75886 Hordeum vulgare MLOC_75886 I 0.709
MTR_6g465460 Medicago truncatula MTR_6g465460 I 0.709
MTR_6g465510 Medicago truncatula MTR_6g465510 I 0.709
DREB1G Oryza indica BGIOSGA008804 I 0.706
GRMZM2G137341 Zea mays GRMZM2G137341 I 0.706
LPERR02G22610 Leersia perrieri LPERR02G22610 I 0.706
OBART02G27760 Oryza barthii OBART02G27760 I 0.706
OGLUM02G28340 Oryza glumaepatula OGLUM02G28340 I 0.706
OMERI02G26980 Oryza meridionalis OMERI02G26980 I 0.706
ONIVA02G30790 Oryza nivara ONIVA02G30790 I 0.706
OPUNC02G25480 Oryza punctata OPUNC02G25480 I 0.706
ORUFI02G29230 Oryza rufipogon ORUFI02G29230 I 0.706
DREB1G Oryza sativa OS02G0677300 D 0.706
POPTR_0004s19820 Populus trichocarpa POPTR_0004s19820 I 0.706
Sb04g031950 Sorghum bicolor Sb04g031950 I 0.706
Pavir.Aa00912 Panicum virgatum Pavir.Aa00912 I 0.706
Pavir.Ab02685 Panicum virgatum Pavir.Ab02685 I 0.706
GLYMA10G38440 Glycine max GLYMA10G38440 I 0.705
MTR_6g465690 Medicago truncatula MTR_6g465690 I 0.705
MTR_6g466000 Medicago truncatula MTR_6g466000 I 0.705
Eucgr.A02818 Eucalyptus grandis Eucgr.A02818 I 0.705
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.703
mgf026339m Mimulus guttatus mgf026339m I 0.701
MTR_6g465450 Medicago truncatula MTR_6g465450 I 0.700
GLYMA20G29410 Glycine max GLYMA20G29410 I 0.699
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I 0.699
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I 0.699
DREB1C Arabidopsis thaliana AT4G25470 D 0.698
Si018262m.g Setaria italica Si018262m.g I 0.696
MTR_8g006410 Medicago truncatula MTR_8g006410 I 0.694
evm.TU.supercontig_5.66 Carica papaya evm.TU.supercontig_5.66 I 0.685
MTR_6g465530 Medicago truncatula MTR_6g465530 I 0.683
LjSGA_077560.1 Lotus japonicus LjSGA_077560.1 N 0.683
ddf2 Arabidopsis lyrata fgenesh2_kg.2__175__AT1G63030.1 D 0.682
Bostr.22157s0019 Boechera stricta Bostr.22157s0019 I 0.682
Thhalv10023865m.g Eutrema salsugineum Thhalv10023865m.g I 0.682