MTR_4g102660 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_4g102660 T002868_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ddf2
M00965_2.00 		Arabidopsis lyrata
NRYCGACAT
ATGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_lyrata 		0.679 0.712
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH31699 AP2 42 96

Links

Other AP2 family TFs
Other Medicago truncatula TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA17G14111 Glycine max GLYMA17G14111 I 0.834
GLYMA05G03560 Glycine max GLYMA05G03560 I 0.823
Ca_08732 Cicer arietinum Ca_08732 I 0.799
MTR_5g010930 Medicago truncatula MTR_5g010930 I 0.753
LjSGA_077560.1 Lotus japonicus LjSGA_077560.1 N 0.752
PRUPE_ppa010909mg Prunus persica PRUPE_ppa010909mg I 0.748
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.748
GLYMA01G42500 Glycine max GLYMA01G42500 I 0.746
MDP0000198054 Malus domestica MDP0000198054 I 0.743
Pm023772 Prunus mume Pm023772 I 0.740
Lus10017829.g Linum usitatissimum Lus10017829.g I 0.737
30190.m011119 Ricinus communis 30190.m011119 I 0.735
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I 0.733
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.733
Pm023775 Prunus mume Pm023775 I 0.733
PGSC0003DMG400012525 Solanum tuberosum PGSC0003DMG400012525 I 0.733
Cla011674 Citrullus lanatus Cla011674 I 0.732
MDP0000154764 Malus domestica MDP0000154764 I 0.730
Ciclev10021923m.g Citrus clementina Ciclev10021923m.g I 0.730
chr2.CM0304.640.nd Lotus japonicus chr2.CM0304.640.nd I 0.726
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I 0.725
LjSGA_037211.1 Lotus japonicus LjSGA_037211.1 I 0.718
cassava17064.m1 Manihot esculenta cassava17064.m1 I 0.715
Pm023769 Prunus mume Pm023769 I 0.713
PRUPE_ppa021197mg Prunus persica PRUPE_ppa021197mg I 0.713
PRUPE_ppa017761mg Prunus persica PRUPE_ppa017761mg I 0.708
Cucsa.302750 Cucumis sativus Cucsa.302750 I 0.707
Solyc08g007820.1 Solanum lycopersicum Solyc08g007820.1 I 0.706
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I 0.704
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.699
mgf026642m Mimulus guttatus mgf026642m I 0.697
PGSC0003DMG400004255 Solanum tuberosum PGSC0003DMG400004255 I 0.695
30190.m011120 Ricinus communis 30190.m011120 I 0.694
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I 0.694
PGSC0003DMG400012524 Solanum tuberosum PGSC0003DMG400012524 I 0.694
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.693
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.692
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.692
PK23332.1 Cannabis sativa PK23332.1 I 0.690
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.690
mgf017136m Mimulus guttatus mgf017136m I 0.690
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.689
mgf019061m Mimulus guttatus mgf019061m I 0.689
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.689
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.689
orange1.1g026103m.g Citrus sinensis orange1.1g026103m.g I 0.687
MTR_2g085015 Medicago truncatula MTR_2g085015 I 0.685
GLYMA12G09130 Glycine max GLYMA12G09130 I 0.684
GLYMA11G19341 Glycine max GLYMA11G19341 I 0.684
VIT_02s0025g04460 Vitis vinifera VIT_02s0025g04460 I 0.683
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.682
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.682
TCM_016175 Theobroma cacao TCM_016175 I 0.681
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.680
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.679
ddf2 Arabidopsis lyrata fgenesh2_kg.2__175__AT1G63030.1 D 0.679
Bostr.22157s0019 Boechera stricta Bostr.22157s0019 I 0.679
Thhalv10023865m.g Eutrema salsugineum Thhalv10023865m.g I 0.679
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.679
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.678
Solyc08g007830.1 Solanum lycopersicum Solyc08g007830.1 I 0.678
Cla006315 Citrullus lanatus Cla006315 I 0.678
Aquca_013_00434 Aquilegia coerulea Aquca_013_00434 I 0.677
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I 0.677