GLYMA01G42500 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA01G42500 T001726_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ddf2
M00965_2.00 		Arabidopsis lyrata
NRYCGACAT
ATGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_lyrata 		0.685 0.740
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.679 0.800
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.679 0.800
DREB1F
M00962_2.00 		Arabidopsis thaliana
NRCCGACNN
NNGTCGGYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana 		0.679 0.760
DREB1F
M00840_2.00 		Arabidopsis thaliana
NRYCGACNN
NNGTCGRYN		 PBM
Franco-Zorrilla et al.(2014)
DDF1 		0.679 0.760
DDF1
M00964_2.00 		Arabidopsis lyrata
NRYCGACDY
RHGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata 		0.679 0.760
DREB1F
M06564_2.00 		Arabidopsis thaliana
NHNHYGYCGACATNN
NNATGTCGRCRDNDN		 Dap-seq
OMalley et al.(2016)
DDF1_col_a 		0.679 0.760
DREB1F
M06565_2.00 		Arabidopsis thaliana
HNDNNRYCGACAH
DTGTCGRYNNHND		 Dap-seq
OMalley et al.(2016)
DDF1_colamp_a 		0.679 0.760
DREB1F
M09701_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1F_03 		0.679 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA01G42500.2 AP2 61 112

Links

Other AP2 family TFs
Other Glycine max TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_08732 Cicer arietinum Ca_08732 I 0.764
GLYMA17G14111 Glycine max GLYMA17G14111 I 0.759
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I 0.753
MTR_5g010930 Medicago truncatula MTR_5g010930 I 0.752
30190.m011119 Ricinus communis 30190.m011119 I 0.751
GLYMA05G03560 Glycine max GLYMA05G03560 I 0.748
MTR_4g102660 Medicago truncatula MTR_4g102660 I 0.746
PRUPE_ppa010909mg Prunus persica PRUPE_ppa010909mg I 0.730
TCM_016175 Theobroma cacao TCM_016175 I 0.730
chr2.CM0304.640.nd Lotus japonicus chr2.CM0304.640.nd I 0.724
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.722
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.721
Pm023772 Prunus mume Pm023772 I 0.718
LjSGA_037211.1 Lotus japonicus LjSGA_037211.1 I 0.717
PGSC0003DMG400012525 Solanum tuberosum PGSC0003DMG400012525 I 0.715
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.715
MDP0000198054 Malus domestica MDP0000198054 I 0.715
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.711
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I 0.711
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.711
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.711
mgf017136m Mimulus guttatus mgf017136m I 0.708
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.707
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I 0.706
Cla011674 Citrullus lanatus Cla011674 I 0.706
Pm023775 Prunus mume Pm023775 I 0.706
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.705
mgf019061m Mimulus guttatus mgf019061m I 0.705
mgf026642m Mimulus guttatus mgf026642m I 0.705
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.705
Ciclev10021923m.g Citrus clementina Ciclev10021923m.g I 0.704
GLYMA12G09130 Glycine max GLYMA12G09130 I 0.703
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.703
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.702
MDP0000154764 Malus domestica MDP0000154764 I 0.702
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.702
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.701
PRUPE_ppa021197mg Prunus persica PRUPE_ppa021197mg I 0.701
Cla006315 Citrullus lanatus Cla006315 I 0.701
Pm023769 Prunus mume Pm023769 I 0.701
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I 0.700
VIT_02s0025g04460 Vitis vinifera VIT_02s0025g04460 I 0.699
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.699
PK23332.1 Cannabis sativa PK23332.1 I 0.699
cassava17064.m1 Manihot esculenta cassava17064.m1 I 0.696
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I 0.693
Bra019777 Brassica rapa Bra019777 I 0.690
MTR_6g466130 Medicago truncatula MTR_6g466130 I 0.690
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.690
Solyc08g007820.1 Solanum lycopersicum Solyc08g007820.1 I 0.689
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I 0.689
LjSGA_077560.1 Lotus japonicus LjSGA_077560.1 N 0.689
60638.m00016 Ricinus communis 60638.m00016 I 0.687
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.686
PRUPE_ppa017761mg Prunus persica PRUPE_ppa017761mg I 0.686
Bo01335s010 Brassica oleracea Bo01335s010 I 0.685
Bra016763 Brassica rapa Bra016763 I 0.685
ddf2 Arabidopsis lyrata fgenesh2_kg.2__175__AT1G63030.1 D 0.685
GSMUA_Achr11G21630_001 Musa acuminata GSMUA_Achr11G21630_001 I 0.685
30147.m014313 Ricinus communis 30147.m014313 I 0.685
Bostr.22157s0019 Boechera stricta Bostr.22157s0019 I 0.685
Lus10017829.g Linum usitatissimum Lus10017829.g I 0.685
Thhalv10023865m.g Eutrema salsugineum Thhalv10023865m.g I 0.685
30190.m011120 Ricinus communis 30190.m011120 I 0.683
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.683
Cucsa.302750 Cucumis sativus Cucsa.302750 I 0.682
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.682
Thhalv10009978m.g Eutrema salsugineum Thhalv10009978m.g I 0.681
DREB1F Arabidopsis thaliana AT1G12610 D 0.679
DREB1D Arabidopsis thaliana AT5G51990 D 0.679
Bo9g104770 Brassica oleracea Bo9g104770 I 0.679
Bra028290 Brassica rapa Bra028290 I 0.679
DDF1 Arabidopsis lyrata fgenesh2_kg.1__1363__AT1G12610.1 D 0.679
PGSC0003DMG400004255 Solanum tuberosum PGSC0003DMG400004255 I 0.679
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.679
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.679
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.679
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.679
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.679
Aquca_013_00434 Aquilegia coerulea Aquca_013_00434 I 0.678
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.677