MDP0000154764 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000154764 T008980_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.759 0.843
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.759 0.843
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.755 0.824
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.755 0.824
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.755 0.824
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.755 0.824
DREB1F
M00962_2.00 		Arabidopsis thaliana
NRCCGACNN
NNGTCGGYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana 		0.735 0.784
DREB1F
M00840_2.00 		Arabidopsis thaliana
NRYCGACNN
NNGTCGRYN		 PBM
Franco-Zorrilla et al.(2014)
DDF1 		0.735 0.784
DDF1
M00964_2.00 		Arabidopsis lyrata
NRYCGACDY
RHGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata 		0.735 0.784
DREB1F
M06564_2.00 		Arabidopsis thaliana
NHNHYGYCGACATNN
NNATGTCGRCRDNDN		 Dap-seq
OMalley et al.(2016)
DDF1_col_a 		0.735 0.784
DREB1F
M06565_2.00 		Arabidopsis thaliana
HNDNNRYCGACAH
DTGTCGRYNNHND		 Dap-seq
OMalley et al.(2016)
DDF1_colamp_a 		0.735 0.784
DREB1F
M09701_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1F_03 		0.735 0.784
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.720 0.784
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.720 0.784
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.720 0.784
DREB1G
M01635_2.00 		Oryza sativa
NYGCCGACAN
NTGTCGGCRN		 PBM
Weirauch et al.(2014)
pTH8352 		0.711 0.745
DREB1G
M09707_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1G_01 		0.711 0.745
ddf2
M00965_2.00 		Arabidopsis lyrata
NRYCGACAT
ATGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_lyrata 		0.703 0.745
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000154764 AP2 151 203

Links

Other AP2 family TFs
Other Malus domestica TFs

183 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I 0.873
Pm023775 Prunus mume Pm023775 I 0.873
MDP0000198054 Malus domestica MDP0000198054 I 0.864
PRUPE_ppa010909mg Prunus persica PRUPE_ppa010909mg I 0.851
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I 0.850
Pm023772 Prunus mume Pm023772 I 0.839
PRUPE_ppa021197mg Prunus persica PRUPE_ppa021197mg I 0.838
Pm023769 Prunus mume Pm023769 I 0.838
Cla011674 Citrullus lanatus Cla011674 I 0.825
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.821
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.821
PRUPE_ppa017761mg Prunus persica PRUPE_ppa017761mg I 0.815
VIT_02s0025g04460 Vitis vinifera VIT_02s0025g04460 I 0.809
TCM_016175 Theobroma cacao TCM_016175 I 0.807
30190.m011120 Ricinus communis 30190.m011120 I 0.801
Cucsa.302750 Cucumis sativus Cucsa.302750 I 0.800
Lus10017829.g Linum usitatissimum Lus10017829.g I 0.793
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.791
POPTR_0001s08720 Populus trichocarpa POPTR_0001s08720 I 0.791
SapurV1A.0282s0070 Salix purpurea SapurV1A.0282s0070 I 0.791
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.790
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.790
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.790
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.787
PGSC0003DMG400012525 Solanum tuberosum PGSC0003DMG400012525 I 0.784
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.784
mgf026642m Mimulus guttatus mgf026642m I 0.784
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.784
GSMUA_Achr11G21630_001 Musa acuminata GSMUA_Achr11G21630_001 I 0.783
60638.m00016 Ricinus communis 60638.m00016 I 0.783
LjSGA_037211.1 Lotus japonicus LjSGA_037211.1 I 0.782
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.781
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.781
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.781
Ciclev10021923m.g Citrus clementina Ciclev10021923m.g I 0.780
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.780
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.779
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.778
PK23332.1 Cannabis sativa PK23332.1 I 0.778
Cla006315 Citrullus lanatus Cla006315 I 0.777
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I 0.777
PGSC0003DMG400004255 Solanum tuberosum PGSC0003DMG400004255 I 0.776
PRUPE_ppa014628mg Prunus persica PRUPE_ppa014628mg N 0.776
cassava17064.m1 Manihot esculenta cassava17064.m1 I 0.774
mgf017136m Mimulus guttatus mgf017136m I 0.772
Aquca_013_00436 Aquilegia coerulea Aquca_013_00436 I 0.771
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.769
Lus10001871.g Linum usitatissimum Lus10001871.g I 0.768
Lus10006332.g Linum usitatissimum Lus10006332.g I 0.768
Lus10006334.g Linum usitatissimum Lus10006334.g I 0.768
Lus10029601.g Linum usitatissimum Lus10029601.g I 0.768
Lus10029602.g Linum usitatissimum Lus10029602.g I 0.768
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I 0.768
MTR_6g466130 Medicago truncatula MTR_6g466130 I 0.767
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I 0.765
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.765
30147.m014313 Ricinus communis 30147.m014313 I 0.764
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.762
Aquca_013_00435 Aquilegia coerulea Aquca_013_00435 I 0.761
DREB1D Arabidopsis thaliana AT5G51990 D 0.759
Bo9g104770 Brassica oleracea Bo9g104770 I 0.759
Bra028290 Brassica rapa Bra028290 I 0.759
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.759
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.759
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.759
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.759
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.759
Solyc08g007820.1 Solanum lycopersicum Solyc08g007820.1 I 0.758
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.756
VIT_11s0016g02140 Vitis vinifera VIT_11s0016g02140 I 0.756
mgf019061m Mimulus guttatus mgf019061m I 0.756
DREB1A Arabidopsis thaliana AT4G25480 D 0.755
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I 0.755
Bostr.7867s0359 Boechera stricta Bostr.7867s0359 I 0.755
Bostr.7867s0361 Boechera stricta Bostr.7867s0361 I 0.755
Cagra.28753s0001 Capsella grandiflora Cagra.28753s0001 I 0.755
Carubv10005709m.g Capsella rubella Carubv10005709m.g I 0.755
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.754
GSMUA_Achr8G11980_001 Musa acuminata GSMUA_Achr8G11980_001 I 0.753
PGSC0003DMG400012524 Solanum tuberosum PGSC0003DMG400012524 I 0.752
Aquca_012_00144 Aquilegia coerulea Aquca_012_00144 I 0.752
Aquca_013_00434 Aquilegia coerulea Aquca_013_00434 I 0.752
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.751
GLYMA12G30740 Glycine max GLYMA12G30740 I 0.750
CBF2 Arabidopsis lyrata fgenesh2_kg.7__1712__AT4G25470.1 I 0.749
Cla002362 Citrullus lanatus Cla002362 I 0.746
MTR_5g010930 Medicago truncatula MTR_5g010930 I 0.745
Carubv10006965m.g Capsella rubella Carubv10006965m.g I 0.745
GLYMA17G14111 Glycine max GLYMA17G14111 I 0.744
30190.m011119 Ricinus communis 30190.m011119 I 0.744
SapurV1A.0045s0710 Salix purpurea SapurV1A.0045s0710 I 0.744
SapurV1A.0282s0080 Salix purpurea SapurV1A.0282s0080 I 0.744
MTR_6g465510 Medicago truncatula MTR_6g465510 I 0.743
Bo01335s010 Brassica oleracea Bo01335s010 I 0.742
Bra016763 Brassica rapa Bra016763 I 0.742
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.742
POPTR_0009s14990 Populus trichocarpa POPTR_0009s14990 I 0.742
SapurV1A.0219s0320 Salix purpurea SapurV1A.0219s0320 I 0.742
MTR_6g465690 Medicago truncatula MTR_6g465690 I 0.739
MTR_6g466000 Medicago truncatula MTR_6g466000 I 0.739
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.739
Gorai.006G046200 Gossypium raimondii Gorai.006G046200 I 0.739
Ca_08732 Cicer arietinum Ca_08732 I 0.738
Thhalv10009978m.g Eutrema salsugineum Thhalv10009978m.g I 0.738
orange1.1g026103m.g Citrus sinensis orange1.1g026103m.g I 0.737
GLYMA13G39540 Glycine max GLYMA13G39540 I 0.736
DREB1F Arabidopsis thaliana AT1G12610 D 0.735
DDF1 Arabidopsis lyrata fgenesh2_kg.1__1363__AT1G12610.1 D 0.735
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.735
GLYMA05G03560 Glycine max GLYMA05G03560 I 0.733
Pm023777 Prunus mume Pm023777 N 0.733
Bo8g108050 Brassica oleracea Bo8g108050 I 0.732
Bra026963 Brassica rapa Bra026963 I 0.732
GLYMA10G38440 Glycine max GLYMA10G38440 I 0.731
cassava41218.m1 Manihot esculenta cassava41218.m1 I 0.731
Eucgr.A02818 Eucalyptus grandis Eucgr.A02818 I 0.731
MTR_2g085015 Medicago truncatula MTR_2g085015 I 0.730
MTR_4g102660 Medicago truncatula MTR_4g102660 I 0.730
MTR_6g465460 Medicago truncatula MTR_6g465460 I 0.728
Cagra.0568s0171 Capsella grandiflora Cagra.0568s0171 I 0.728
Carubv10010303m.g Capsella rubella Carubv10010303m.g I 0.728
Bostr.13671s0200 Boechera stricta Bostr.13671s0200 I 0.725
GLYMA20G29410 Glycine max GLYMA20G29410 I 0.724
Solyc08g007830.1 Solanum lycopersicum Solyc08g007830.1 I 0.724
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.724
mgf026339m Mimulus guttatus mgf026339m I 0.724
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I 0.724
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I 0.724
DREB1C Arabidopsis thaliana AT4G25470 D 0.720
POPTR_0004s19820 Populus trichocarpa POPTR_0004s19820 I 0.720
MTR_6g465420 Medicago truncatula MTR_6g465420 I 0.718
MTR_6g465430 Medicago truncatula MTR_6g465430 I 0.718
MTR_6g465450 Medicago truncatula MTR_6g465450 I 0.718
MTR_6g465530 Medicago truncatula MTR_6g465530 I 0.717
MTR_8g006410 Medicago truncatula MTR_8g006410 I 0.717
BRADI3G51630 Brachypodium distachyon BRADI3G51630 I 0.716
MLOC_75886 Hordeum vulgare MLOC_75886 I 0.716
GLYMA11G19341 Glycine max GLYMA11G19341 I 0.715
GLYMA12G09130 Glycine max GLYMA12G09130 I 0.715
PGSC0003DMG400012526 Solanum tuberosum PGSC0003DMG400012526 I 0.715
VIT_06s0061g01400 Vitis vinifera VIT_06s0061g01400 I 0.714
DREB1G Oryza indica BGIOSGA008804 I 0.711
GRMZM2G137341 Zea mays GRMZM2G137341 I 0.711
LPERR02G22610 Leersia perrieri LPERR02G22610 I 0.711
OBART02G27760 Oryza barthii OBART02G27760 I 0.711
OGLUM02G28340 Oryza glumaepatula OGLUM02G28340 I 0.711
OMERI02G26980 Oryza meridionalis OMERI02G26980 I 0.711
ONIVA02G30790 Oryza nivara ONIVA02G30790 I 0.711
OPUNC02G25480 Oryza punctata OPUNC02G25480 I 0.711
ORUFI02G29230 Oryza rufipogon ORUFI02G29230 I 0.711
DREB1G Oryza sativa OS02G0677300 D 0.711
Sb04g031950 Sorghum bicolor Sb04g031950 I 0.711
Pavir.Aa00912 Panicum virgatum Pavir.Aa00912 I 0.711
Pavir.Ab02685 Panicum virgatum Pavir.Ab02685 I 0.711
evm.TU.supercontig_5.66 Carica papaya evm.TU.supercontig_5.66 I 0.706
ddf2 Arabidopsis lyrata fgenesh2_kg.2__175__AT1G63030.1 D 0.703
Bostr.22157s0019 Boechera stricta Bostr.22157s0019 I 0.703
Thhalv10023865m.g Eutrema salsugineum Thhalv10023865m.g I 0.703
GLYMA01G42500 Glycine max GLYMA01G42500 I 0.702
Si018262m.g Setaria italica Si018262m.g I 0.701
MTR_5g010910 Medicago truncatula MTR_5g010910 N 0.698
MTR_5g010940 Medicago truncatula MTR_5g010940 N 0.698
MTR_6g465850 Medicago truncatula MTR_6g465850 I 0.698
Ca_18948 Cicer arietinum Ca_18948 I 0.698
MTR_1g101600 Medicago truncatula MTR_1g101600 I 0.697
PGSC0003DMG400038366 Solanum tuberosum PGSC0003DMG400038366 I 0.697
Aquca_122_00012 Aquilegia coerulea Aquca_122_00012 I 0.693
GLYMA16G32330 Glycine max GLYMA16G32330 I 0.692
chr3.LjT42M03.60.nd Lotus japonicus chr3.LjT42M03.60.nd I 0.691
Bo5g016750 Brassica oleracea Bo5g016750 I 0.689
Solyc12g056430.1 Solanum lycopersicum Solyc12g056430.1 I 0.689
Lus10031657.g Linum usitatissimum Lus10031657.g I 0.689
AMTR_s00095p00096190 Amborella trichopoda AMTR_s00095p00096190 I 0.688
Solyc01g009440.1 Solanum lycopersicum Solyc01g009440.1 I 0.687
Pm019386 Prunus mume Pm019386 I 0.686
Lus10027412.g Linum usitatissimum Lus10027412.g I 0.686
Cagra.23885s0001 Capsella grandiflora Cagra.23885s0001 I 0.685
Carubv10021910m.g Capsella rubella Carubv10021910m.g I 0.685
Aquca_122_00013 Aquilegia coerulea Aquca_122_00013 I 0.683
Eucgr.A02820 Eucalyptus grandis Eucgr.A02820 I 0.681
Eucgr.A02824 Eucalyptus grandis Eucgr.A02824 I 0.681
Eucgr.A02826 Eucalyptus grandis Eucgr.A02826 I 0.681
Eucgr.A02832 Eucalyptus grandis Eucgr.A02832 I 0.681