GLYMA12G09130 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA12G09130 T001915_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.726 0.725
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.726 0.725
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.688 0.667
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.688 0.667
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.688 0.667
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA12G09130.1 AP2 64 115

Links

Other AP2 family TFs
Other Glycine max TFs

85 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA11G19341 Glycine max GLYMA11G19341 I 0.774
GLYMA12G30740 Glycine max GLYMA12G30740 I 0.747
MTR_2g085015 Medicago truncatula MTR_2g085015 I 0.743
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.738
GLYMA13G39540 Glycine max GLYMA13G39540 I 0.732
Cucsa.302750 Cucumis sativus Cucsa.302750 I 0.732
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.730
DREB1D Arabidopsis thaliana AT5G51990 D 0.726
Bo9g104770 Brassica oleracea Bo9g104770 I 0.726
Bra028290 Brassica rapa Bra028290 I 0.726
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.726
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.726
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.726
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.726
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I 0.726
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.726
MDP0000198054 Malus domestica MDP0000198054 I 0.725
PRUPE_ppa010909mg Prunus persica PRUPE_ppa010909mg I 0.723
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I 0.715
Pm023775 Prunus mume Pm023775 I 0.715
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.715
MDP0000154764 Malus domestica MDP0000154764 I 0.715
Cla002362 Citrullus lanatus Cla002362 I 0.714
Pm023772 Prunus mume Pm023772 I 0.711
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.711
MTR_5g010930 Medicago truncatula MTR_5g010930 I 0.709
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I 0.708
30190.m011119 Ricinus communis 30190.m011119 I 0.708
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.708
Ca_08732 Cicer arietinum Ca_08732 I 0.706
30190.m011120 Ricinus communis 30190.m011120 I 0.705
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.704
GLYMA01G42500 Glycine max GLYMA01G42500 I 0.703
TCM_016175 Theobroma cacao TCM_016175 I 0.703
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.701
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.701
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.701
Cla011674 Citrullus lanatus Cla011674 I 0.700
chr2.CM0304.640.nd Lotus japonicus chr2.CM0304.640.nd I 0.700
GLYMA17G14111 Glycine max GLYMA17G14111 I 0.698
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.695
VIT_02s0025g04460 Vitis vinifera VIT_02s0025g04460 I 0.695
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.695
mgf026642m Mimulus guttatus mgf026642m I 0.695
Cla006315 Citrullus lanatus Cla006315 I 0.694
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.694
PGSC0003DMG400012525 Solanum tuberosum PGSC0003DMG400012525 I 0.693
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I 0.693
VIT_06s0061g01400 Vitis vinifera VIT_06s0061g01400 I 0.691
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.691
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.691
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.690
PRUPE_ppa021197mg Prunus persica PRUPE_ppa021197mg I 0.690
Pm023769 Prunus mume Pm023769 I 0.690
DREB1C Arabidopsis thaliana AT4G25470 D 0.688
MTR_6g465420 Medicago truncatula MTR_6g465420 I 0.688
MTR_6g465430 Medicago truncatula MTR_6g465430 I 0.688
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.688
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.688
Aquca_013_00435 Aquilegia coerulea Aquca_013_00435 I 0.688
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.688
PK23332.1 Cannabis sativa PK23332.1 I 0.688
GLYMA05G03560 Glycine max GLYMA05G03560 I 0.687
SapurV1A.0045s0710 Salix purpurea SapurV1A.0045s0710 I 0.687
SapurV1A.0282s0080 Salix purpurea SapurV1A.0282s0080 I 0.687
MTR_6g466130 Medicago truncatula MTR_6g466130 I 0.686
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.686
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.685
PRUPE_ppa017761mg Prunus persica PRUPE_ppa017761mg I 0.685
MTR_4g102660 Medicago truncatula MTR_4g102660 I 0.684
MTR_6g465510 Medicago truncatula MTR_6g465510 I 0.683
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.683
GSMUA_Achr11G21630_001 Musa acuminata GSMUA_Achr11G21630_001 I 0.682
POPTR_0001s08720 Populus trichocarpa POPTR_0001s08720 I 0.682
60638.m00016 Ricinus communis 60638.m00016 I 0.682
SapurV1A.0282s0070 Salix purpurea SapurV1A.0282s0070 I 0.682
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.681
LjSGA_037211.1 Lotus japonicus LjSGA_037211.1 I 0.681
MTR_6g465690 Medicago truncatula MTR_6g465690 I 0.679
MTR_6g466000 Medicago truncatula MTR_6g466000 I 0.679
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.679
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I 0.679
MTR_6g465460 Medicago truncatula MTR_6g465460 I 0.678
MTR_6g465850 Medicago truncatula MTR_6g465850 I 0.678
Aquca_013_00436 Aquilegia coerulea Aquca_013_00436 I 0.678