Eucgr.A02824 (Eucalyptus grandis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Eucgr.A02824 T008102_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.726 0.920
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.726 0.920
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.694 0.880
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.694 0.880
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.694 0.880
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.694 0.880
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.687 0.840
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.687 0.840
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.687 0.840
Q8S2T3_BRANA
M09745_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBF16_01 		0.685 0.880
Q6T3U0_BRANA
M09743_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBII1_01 		0.685 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.A02824.1 AP2 60 111

Links

Other AP2 family TFs
Other Eucalyptus grandis TFs

99 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.A02820 Eucalyptus grandis Eucgr.A02820 I 0.832
Eucgr.A02826 Eucalyptus grandis Eucgr.A02826 I 0.832
Eucgr.A02832 Eucalyptus grandis Eucgr.A02832 I 0.832
Eucgr.A02822 Eucalyptus grandis Eucgr.A02822 I 0.828
mgf016974m Mimulus guttatus mgf016974m I 0.826
mgf018631m Mimulus guttatus mgf018631m I 0.826
mgf018934m Mimulus guttatus mgf018934m I 0.826
mgf022408m Mimulus guttatus mgf022408m I 0.826
Eucgr.A02831 Eucalyptus grandis Eucgr.A02831 I 0.826
Eucgr.A02827 Eucalyptus grandis Eucgr.A02827 I 0.822
Eucgr.A02834 Eucalyptus grandis Eucgr.A02834 I 0.822
Eucgr.A02821 Eucalyptus grandis Eucgr.A02821 I 0.821
Eucgr.A02825 Eucalyptus grandis Eucgr.A02825 I 0.798
Eucgr.A02830 Eucalyptus grandis Eucgr.A02830 I 0.791
GLYMA10G38440 Glycine max GLYMA10G38440 I 0.789
GLYMA20G29410 Glycine max GLYMA20G29410 I 0.782
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I 0.782
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I 0.782
MTR_1g101600 Medicago truncatula MTR_1g101600 I 0.776
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.756
Ca_04504 Cicer arietinum Ca_04504 I 0.755
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.753
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.749
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.745
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.729
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.729
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.729
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.729
DREB1D Arabidopsis thaliana AT5G51990 D 0.726
Bo9g104770 Brassica oleracea Bo9g104770 I 0.726
Bra028290 Brassica rapa Bra028290 I 0.726
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.726
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.726
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.726
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.726
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.726
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.723
mgf026642m Mimulus guttatus mgf026642m I 0.723
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.723
Bo8g050800 Brassica oleracea Bo8g050800 I 0.719
Bra010460 Brassica rapa Bra010460 I 0.719
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.719
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.719
Lus10019455.g Linum usitatissimum Lus10019455.g I 0.718
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I 0.718
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.717
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.717
Eucgr.A02818 Eucalyptus grandis Eucgr.A02818 I 0.717
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.717
PK23332.1 Cannabis sativa PK23332.1 I 0.717
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.715
Cla006315 Citrullus lanatus Cla006315 I 0.715
Cla002362 Citrullus lanatus Cla002362 I 0.713
PRUPE_ppa014628mg Prunus persica PRUPE_ppa014628mg N 0.712
Pm023777 Prunus mume Pm023777 N 0.712
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.711
Solyc08g007830.1 Solanum lycopersicum Solyc08g007830.1 I 0.708
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.707
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I 0.707
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.704
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.703
30147.m014313 Ricinus communis 30147.m014313 I 0.703
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.701
PGSC0003DMG400012526 Solanum tuberosum PGSC0003DMG400012526 I 0.699
DREB1A Arabidopsis thaliana AT4G25480 D 0.694
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I 0.694
Ca_02407 Cicer arietinum Ca_02407 N 0.693
Bostr.7867s0359 Boechera stricta Bostr.7867s0359 I 0.693
Bostr.7867s0361 Boechera stricta Bostr.7867s0361 I 0.693
Cagra.28753s0001 Capsella grandiflora Cagra.28753s0001 I 0.693
Carubv10005709m.g Capsella rubella Carubv10005709m.g I 0.693
Ca_03665 Cicer arietinum Ca_03665 N 0.691
Lus10031657.g Linum usitatissimum Lus10031657.g I 0.691
mgf017477m Mimulus guttatus mgf017477m N 0.690
DREB1C Arabidopsis thaliana AT4G25470 D 0.687
CBF2 Arabidopsis lyrata fgenesh2_kg.7__1712__AT4G25470.1 I 0.687
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.687
Lus10027412.g Linum usitatissimum Lus10027412.g I 0.687
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I 0.686
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.686
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.686
Bo7g110320 Brassica oleracea Bo7g110320 I 0.685
Bra019162 Brassica rapa Bra019162 I 0.685
Q6T3U0_BRANA Brassica napus Q6T3U0_BRANA D 0.685
Q8S2T3_BRANA Brassica napus Q8S2T3_BRANA D 0.685
Solyc12g056430.1 Solanum lycopersicum Solyc12g056430.1 I 0.684
Ca_18948 Cicer arietinum Ca_18948 I 0.684
30190.m011120 Ricinus communis 30190.m011120 I 0.683
Bra022770 Brassica rapa Bra022770 I 0.682
Cucsa.302750 Cucumis sativus Cucsa.302750 I 0.682
MDP0000154764 Malus domestica MDP0000154764 I 0.681
mgf017136m Mimulus guttatus mgf017136m I 0.680
MDP0000198054 Malus domestica MDP0000198054 I 0.679
GLYMA12G30740 Glycine max GLYMA12G30740 I 0.678
Cla011674 Citrullus lanatus Cla011674 I 0.678
chr3.LjT42M03.60.nd Lotus japonicus chr3.LjT42M03.60.nd I 0.678
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I 0.677
Pm023775 Prunus mume Pm023775 I 0.677
Gorai.006G046200 Gossypium raimondii Gorai.006G046200 I 0.677