GSMUA_Achr7G05900_001 (Musa acuminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GSMUA_Achr7G05900_001 T002442_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.693 0.824
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.693 0.824
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.693 0.824
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.693 0.824
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.682 0.804
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.682 0.804
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr7P05900_001 AP2 52 104

Links

Other AP2 family TFs
Other Musa acuminata TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr4G19660_001 Musa acuminata GSMUA_Achr4G19660_001 I 0.827
BRADI1G49560 Brachypodium distachyon BRADI1G49560 I 0.729
BRADI1G49570 Brachypodium distachyon BRADI1G49570 I 0.729
mgf026642m Mimulus guttatus mgf026642m I 0.722
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.719
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.719
PK23332.1 Cannabis sativa PK23332.1 I 0.719
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.718
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.714
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.714
Eucgr.A02818 Eucalyptus grandis Eucgr.A02818 I 0.714
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.714
GSMUA_Achr11G21630_001 Musa acuminata GSMUA_Achr11G21630_001 I 0.711
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.711
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.708
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.708
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.708
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.707
DREB1C Oryza indica BGIOSGA022219 N 0.706
GRMZM2G380377 Zea mays GRMZM2G380377 N 0.706
LPERR06G01360 Leersia perrieri LPERR06G01360 N 0.706
OMERI06G01670 Oryza meridionalis OMERI06G01670 N 0.706
ONIVA06G01850 Oryza nivara ONIVA06G01850 N 0.706
ORUFI06G01550 Oryza rufipogon ORUFI06G01550 N 0.706
DREB1C Oryza sativa OS06G0127100 N 0.706
Sb10g001620 Sorghum bicolor Sb10g001620 N 0.706
Si007199m.g Setaria italica Si007199m.g N 0.706
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.706
Pavir.J35991 Panicum virgatum Pavir.J35991 N 0.706
Cla006315 Citrullus lanatus Cla006315 I 0.704
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.703
GLYMA10G38440 Glycine max GLYMA10G38440 I 0.702
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.700
GLYMA20G29410 Glycine max GLYMA20G29410 I 0.699
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I 0.699
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I 0.699
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.697
OPUNC06G01430 Oryza punctata OPUNC06G01430 N 0.696
DREB1A Arabidopsis thaliana AT4G25480 D 0.693
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.692
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.692
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I 0.692
MTR_6g466130 Medicago truncatula MTR_6g466130 I 0.691
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.691
CBF2 Arabidopsis lyrata fgenesh2_kg.7__1712__AT4G25470.1 I 0.690
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I 0.689
30147.m014313 Ricinus communis 30147.m014313 I 0.688
Cla002362 Citrullus lanatus Cla002362 I 0.687
MTR_1g101600 Medicago truncatula MTR_1g101600 I 0.685
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.685
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.685
AMTR_s00069p00141520 Amborella trichopoda AMTR_s00069p00141520 I 0.684
MTR_6g465510 Medicago truncatula MTR_6g465510 I 0.683
DREB1D Arabidopsis thaliana AT5G51990 D 0.682
Bo9g104770 Brassica oleracea Bo9g104770 I 0.682
Bra028290 Brassica rapa Bra028290 I 0.682
GSMUA_Achr8G11980_001 Musa acuminata GSMUA_Achr8G11980_001 I 0.682
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.682
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.682
Bostr.7867s0359 Boechera stricta Bostr.7867s0359 I 0.682
Bostr.7867s0361 Boechera stricta Bostr.7867s0361 I 0.682
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.682
Cagra.28753s0001 Capsella grandiflora Cagra.28753s0001 I 0.682
Carubv10005709m.g Capsella rubella Carubv10005709m.g I 0.682
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.682
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.682
VIT_02s0025g04460 Vitis vinifera VIT_02s0025g04460 I 0.681
MTR_6g465690 Medicago truncatula MTR_6g465690 I 0.679
MTR_6g466000 Medicago truncatula MTR_6g466000 I 0.679
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I 0.679
Cla011674 Citrullus lanatus Cla011674 I 0.677