CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava27372.m1
(
Manihot esculenta
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
cassava27372.m1
T048013_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava27372.m1
bHLH
293
341
RSKNLVTERNRRNRMKDGLFTLRALVPKISKMNKAAILGDAIDYIGELQ
Links
Other
bHLH
family TFs
Other
Manihot esculenta
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29631.m001025
Ricinus communis
29631.m001025
N
0.874
cassava41084.m1
Manihot esculenta
cassava41084.m1
N
0.840
evm.TU.supercontig_69.52
Carica papaya
evm.TU.supercontig_69.52
N
0.901
gene00631-v1.0-hybrid
Fragaria vesca
gene00631-v1.0-hybrid
N
0.842
GSMUA_Achr3G00640_001
Musa acuminata
GSMUA_Achr3G00640_001
N
0.847
MDP0000790939
Malus domestica
MDP0000790939
N
0.854