Gorai.004G218900 (Gossypium raimondii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Gorai.004G218900 T049966_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.004G218900.1 bHLH 152 199

Links

Other bHLH family TFs
Other Gossypium raimondii TFs

92 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29598.m000464 Ricinus communis 29598.m000464 N 0.846
29883.m001988 Ricinus communis 29883.m001988 N 0.888
Aquca_017_00590 Aquilegia coerulea Aquca_017_00590 N 0.876
AT1G03040 Arabidopsis thaliana AT1G03040 N 0.858
UNE12 Arabidopsis thaliana AT4G02590 N 0.858
Bo01031s030 Brassica oleracea Bo01031s030 N 0.858
Bo2g100750 Brassica oleracea Bo2g100750 N 0.858
Bo5g003580 Brassica oleracea Bo5g003580 N 0.858
Bo9g005930 Brassica oleracea Bo9g005930 N 0.858
Bostr.2983s0202 Boechera stricta Bostr.2983s0202 N 0.858
Bra000872 Brassica rapa Bra000872 N 0.858
Bra018539 Brassica rapa Bra018539 N 0.858
Bra033368 Brassica rapa Bra033368 N 0.858
Bra036256 Brassica rapa Bra036256 N 0.858
BRADI3G54070 Brachypodium distachyon BRADI3G54070 I 0.841
Cagra.0635s0023 Capsella grandiflora Cagra.0635s0023 N 0.858
Cagra.0897s0074 Capsella grandiflora Cagra.0897s0074 N 0.858
Carubv10001523m.g Capsella rubella Carubv10001523m.g N 0.858
Carubv10009831m.g Capsella rubella Carubv10009831m.g N 0.858
cassava18573.valid.m1 Manihot esculenta cassava18573.valid.m1 N 0.846
cassava36725.valid.m1 Manihot esculenta cassava36725.valid.m1 N 0.888
Ca_03755 Cicer arietinum Ca_03755 N 0.876
Ca_07790 Cicer arietinum Ca_07790 N 0.888
Ca_12194 Cicer arietinum Ca_12194 N 0.888
chr1.CM0375.380.nc Lotus japonicus chr1.CM0375.380.nc N 0.888
chr5.LjT29J15.30.nc Lotus japonicus chr5.LjT29J15.30.nc N 0.863
Ciclev10001768m.g Citrus clementina Ciclev10001768m.g N 0.856
Ciclev10021443m.g Citrus clementina Ciclev10021443m.g N 0.888
Cla011475 Citrullus lanatus Cla011475 N 0.876
Cla015040 Citrullus lanatus Cla015040 N 0.888
Cucsa.289090 Cucumis sativus Cucsa.289090 N 0.876
Cucsa.388780 Cucumis sativus Cucsa.388780 N 0.888
Eucgr.B01487 Eucalyptus grandis Eucgr.B01487 N 0.888
Eucgr.H04337 Eucalyptus grandis Eucgr.H04337 N 0.876
evm.TU.supercontig_117.94 Carica papaya evm.TU.supercontig_117.94 N 0.876
evm.TU.supercontig_52.97 Carica papaya evm.TU.supercontig_52.97 N 0.852
F775_30957 Aegilops tauschii F775_30957 I 0.861
fgenesh2_kg.1__235__AT1G03040.1 Arabidopsis lyrata fgenesh2_kg.1__235__AT1G03040.1 N 0.858
UNE12 Arabidopsis lyrata fgenesh2_kg.6__3435__AT4G02590.2 N 0.858
gene08188-v1.0-hybrid Fragaria vesca gene08188-v1.0-hybrid N 0.876
gene16564-v1.0-hybrid Fragaria vesca gene16564-v1.0-hybrid N 0.876
GLYMA02G16110 Glycine max GLYMA02G16110 N 0.888
GLYMA03G31510 Glycine max GLYMA03G31510 N 0.888
GLYMA10G03690 Glycine max GLYMA10G03690 N 0.888
GLYMA10G30430 Glycine max GLYMA10G30430 N 0.876
GLYMA19G34360 Glycine max GLYMA19G34360 N 0.888
GLYMA20G36770 Glycine max GLYMA20G36770 N 0.876
Gorai.001G242500 Gossypium raimondii Gorai.001G242500 N 0.888
Gorai.004G075200 Gossypium raimondii Gorai.004G075200 N 0.914
Gorai.007G141800 Gossypium raimondii Gorai.007G141800 N 0.888
Gorai.007G277200 Gossypium raimondii Gorai.007G277200 N 0.876
GSMUA_Achr4G21070_001 Musa acuminata GSMUA_Achr4G21070_001 I 0.846
GSMUA_Achr5G03100_001 Musa acuminata GSMUA_Achr5G03100_001 I 0.846
Lus10002720.g Linum usitatissimum Lus10002720.g N 0.852
Lus10006587.g Linum usitatissimum Lus10006587.g N 0.846
Lus10014726.g Linum usitatissimum Lus10014726.g N 0.852
Lus10015909.g Linum usitatissimum Lus10015909.g N 0.846
Lus10018761.g Linum usitatissimum Lus10018761.g N 0.852
Lus10024850.g Linum usitatissimum Lus10024850.g N 0.852
MDP0000176749 Malus domestica MDP0000176749 N 0.876
MDP0000295593 Malus domestica MDP0000295593 N 0.876
mgf001465m Mimulus guttatus mgf001465m N 0.876
MTR_1g070870 Medicago truncatula MTR_1g070870 N 0.888
MTR_1g080890 Medicago truncatula MTR_1g080890 N 0.876
orange1.1g022649m.g Citrus sinensis orange1.1g022649m.g N 0.888
PGSC0003DMG400006089 Solanum tuberosum PGSC0003DMG400006089 N 0.876
PGSC0003DMG400013393 Solanum tuberosum PGSC0003DMG400013393 N 0.876
PGSC0003DMG400019334 Solanum tuberosum PGSC0003DMG400019334 N 0.914
PK20184.1 Cannabis sativa PK20184.1 N 0.876
PK25419.1 Cannabis sativa PK25419.1 N 0.888
Pm003525 Prunus mume Pm003525 N 0.876
Pm020229 Prunus mume Pm020229 N 0.876
POPTR_0002s04620 Populus trichocarpa POPTR_0002s04620 N 0.888
POPTR_0005s23930 Populus trichocarpa POPTR_0005s23930 N 0.888
PRUPE_ppa008172mg Prunus persica PRUPE_ppa008172mg N 0.876
PRUPE_ppa009299mg Prunus persica PRUPE_ppa009299mg N 0.876
SapurV1A.0006s1290 Salix purpurea SapurV1A.0006s1290 N 0.888
SapurV1A.0860s0050 Salix purpurea SapurV1A.0860s0050 N 0.888
Sb01g005130 Sorghum bicolor Sb01g005130 I 0.861
Solyc03g005350.2 Solanum lycopersicum Solyc03g005350.2 N 0.874
Solyc09g065820.2 Solanum lycopersicum Solyc09g065820.2 N 0.914
Solyc09g083220.2 Solanum lycopersicum Solyc09g083220.2 N 0.876
TCM_004217 Theobroma cacao TCM_004217 N 0.888
TCM_026346 Theobroma cacao TCM_026346 N 0.876
Thhalv10008279m.g Eutrema salsugineum Thhalv10008279m.g N 0.858
Thhalv10028824m.g Eutrema salsugineum Thhalv10028824m.g N 0.858
Traes_5BL_DB5410008 Triticum aestivum Traes_5BL_DB5410008 I 0.861
Traes_5DL_1CD573458 Triticum aestivum Traes_5DL_1CD573458 I 0.861
Traes_6BL_AEB13ECDE Triticum aestivum Traes_6BL_AEB13ECDE I 0.841
VIT_05s0020g04620 Vitis vinifera VIT_05s0020g04620 N 0.876
VIT_07s0141g00220 Vitis vinifera VIT_07s0141g00220 N 0.888
VIT_14s0030g02230 Vitis vinifera VIT_14s0030g02230 N 0.876