PK00939.1 (Cannabis sativa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 PK00939.1 T051552_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS01G0235700
M09894_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BHLH66_01 		0.914 1.000
MYC2
M01699_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8083 		0.890 0.896
PK18474.1
M01127_2.00 		Cannabis sativa
NRCACGTGCN
NGCACGTGYN		 PBM
Lambert et al.(2019)
pTH10273 		0.890 0.896
PK18474.1
M01768_2.00 		Cannabis sativa
NCACGWK
MWCGTGN		 PBM
Weirauch et al.(2014)
pTH9589 		0.890 0.896
MYC4
M01707_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8260 		0.890 0.875
MYC3
M01712_2.00 		Arabidopsis thaliana
MWYGTGNNNN
NNNNCACRWK		 PBM
Weirauch et al.(2014)
pTH8854 		0.890 0.875
AT2G22750
M06730_2.00 		Arabidopsis thaliana
MRYGTKDNHCACGTGNN
NNCACGTGDNHMACRYK		 Dap-seq
OMalley et al.(2016)
bHLH18_col_a 		0.882 0.625
BHLH13
M01698_2.00 		Arabidopsis thaliana
MCACGTGV
BCACGTGK		 PBM
Weirauch et al.(2014)
pTH7565 		0.879 0.875
UNE10
M01705_2.00 		Arabidopsis thaliana
HCACGTGM
KCACGTGD		 PBM
Weirauch et al.(2014)
pTH8112 		0.843 0.500
PK09702.1
M01124_2.00 		Cannabis sativa
GCACGTGV
BCACGTGC		 PBM
Lambert et al.(2019)
pTH11374 		0.840 0.625
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK00939.1 bHLH 358 405

Links

Other bHLH family TFs
Other Cannabis sativa TFs

672 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29729.m002369 Ricinus communis 29729.m002369 I
29915.m000479 Ricinus communis 29915.m000479 I
30174.m008651 Ricinus communis 30174.m008651 I
Al_scaffold_0004_2305 Arabidopsis lyrata Al_scaffold_0004_2305 I
Al_scaffold_0005_2548 Arabidopsis lyrata Al_scaffold_0005_2548 I
AMTR_s00077p00103580 Amborella trichopoda AMTR_s00077p00103580 I
AMTR_s00077p00103880 Amborella trichopoda AMTR_s00077p00103880 I
Aquca_027_00037 Aquilegia coerulea Aquca_027_00037 I
Aquca_030_00182 Aquilegia coerulea Aquca_030_00182 I
WRKY54 Arabidopsis thaliana AT2G40750 I
WRKY70 Arabidopsis thaliana AT3G56400 D
BGIOSGA001093 Oryza indica BGIOSGA001093 I
BGIOSGA019621 Oryza indica BGIOSGA019621 I
BGIOSGA030535 Oryza indica BGIOSGA030535 I
Bo00913s010 Brassica oleracea Bo00913s010 I
Bo3g035130 Brassica oleracea Bo3g035130 I
Bo3g035140 Brassica oleracea Bo3g035140 I
Bo4g012750 Brassica oleracea Bo4g012750 I
Bo4g190380 Brassica oleracea Bo4g190380 I
Bo4g190390 Brassica oleracea Bo4g190390 I
Bo6g071110 Brassica oleracea Bo6g071110 I
Bo7g109140 Brassica oleracea Bo7g109140 I
Bo8g090820 Brassica oleracea Bo8g090820 I
Bostr.20505s0112 Boechera stricta Bostr.20505s0112 I
Bostr.9345s0060 Boechera stricta Bostr.9345s0060 I
Bra000202 Brassica rapa Bra000202 I
Bra000203 Brassica rapa Bra000203 I
Bra003239 Brassica rapa Bra003239 I
Bra004586 Brassica rapa Bra004586 I
Bra007243 Brassica rapa Bra007243 I
Bra014692 Brassica rapa Bra014692 I
Bra014693 Brassica rapa Bra014693 I
Bra016974 Brassica rapa Bra016974 I
Bra016975 Brassica rapa Bra016975 I
BRADI2G44270 Brachypodium distachyon BRADI2G44270 I
BRADI2G45480 Brachypodium distachyon BRADI2G45480 I
Cagra.0925s0056 Capsella grandiflora Cagra.0925s0056 I
Cagra.1642s0039 Capsella grandiflora Cagra.1642s0039 I
Carubv10017349m.g Capsella rubella Carubv10017349m.g I
Carubv10024972m.g Capsella rubella Carubv10024972m.g I
cassava23183.valid.m1 Manihot esculenta cassava23183.valid.m1 I
cassava25180.valid.m1 Manihot esculenta cassava25180.valid.m1 I
cassava36286.valid.m1 Manihot esculenta cassava36286.valid.m1 I
cassava43790.valid.m1 Manihot esculenta cassava43790.valid.m1 I
cassava7524.valid.m1 Manihot esculenta cassava7524.valid.m1 I
cassava7525.valid.m1 Manihot esculenta cassava7525.valid.m1 I
cassava8741.m1 Manihot esculenta cassava8741.m1 I
Ca_04100 Cicer arietinum Ca_04100 I
Ca_09495 Cicer arietinum Ca_09495 I
Ca_12915 Cicer arietinum Ca_12915 I
chr1.CM0320.400.nd Lotus japonicus chr1.CM0320.400.nd I
Ciclev10012055m.g Citrus clementina Ciclev10012055m.g I
Ciclev10032192m.g Citrus clementina Ciclev10032192m.g I
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I
Cla007423 Citrullus lanatus Cla007423 I
Cla007424 Citrullus lanatus Cla007424 I
Cla015244 Citrullus lanatus Cla015244 I
Cla018337 Citrullus lanatus Cla018337 I
Cucsa.078810 Cucumis sativus Cucsa.078810 I
Cucsa.143840 Cucumis sativus Cucsa.143840 I
Cucsa.177060 Cucumis sativus Cucsa.177060 I
Eucgr.D02359 Eucalyptus grandis Eucgr.D02359 I
Eucgr.G03145 Eucalyptus grandis Eucgr.G03145 I
Eucgr.J00106 Eucalyptus grandis Eucgr.J00106 I
Eucgr.K01289 Eucalyptus grandis Eucgr.K01289 I
evm.TU.supercontig_19.44 Carica papaya evm.TU.supercontig_19.44 I
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I
F775_27443 Aegilops tauschii F775_27443 I
fgenesh1_pm.C_scaffold_4001818 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001818 I
WRKY70 Arabidopsis lyrata fgenesh2_kg.5__2072__AT3G56400.1 I
gene13547-v1.0-hybrid Fragaria vesca gene13547-v1.0-hybrid I
gene13549-v1.0-hybrid Fragaria vesca gene13549-v1.0-hybrid I
gene13554-v1.0-hybrid Fragaria vesca gene13554-v1.0-hybrid I
gene21365-v1.0-hybrid Fragaria vesca gene21365-v1.0-hybrid I
GLYMA03G00460 Glycine max GLYMA03G00460 I
GLYMA04G40121 Glycine max GLYMA04G40121 I
GLYMA04G40130 Glycine max GLYMA04G40130 I
GLYMA06G14720 Glycine max GLYMA06G14720 I
GLYMA06G14731 Glycine max GLYMA06G14731 I
GLYMA09G41050 Glycine max GLYMA09G41050 I
GLYMA14G36430 Glycine max GLYMA14G36430 I
GLYMA14G36438 Glycine max GLYMA14G36438 I
GLYMA14G36446 Glycine max GLYMA14G36446 I
GLYMA16G34590 Glycine max GLYMA16G34590 I
GLYMA18G44560 Glycine max GLYMA18G44560 I
Gorai.001G155800 Gossypium raimondii Gorai.001G155800 I
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I
Gorai.009G292600 Gossypium raimondii Gorai.009G292600 I
Gorai.010G219200 Gossypium raimondii Gorai.010G219200 I
Gorai.012G013900 Gossypium raimondii Gorai.012G013900 I
Gorai.012G014000 Gossypium raimondii Gorai.012G014000 I
Gorai.013G008300 Gossypium raimondii Gorai.013G008300 I
GRMZM2G025895 Zea mays GRMZM2G025895 I
GRMZM2G061408 Zea mays GRMZM2G061408 I
GRMZM2G411766 Zea mays GRMZM2G411766 I
GSMUA_Achr5G07490_001 Musa acuminata GSMUA_Achr5G07490_001 I
GSMUA_Achr6G05710_001 Musa acuminata GSMUA_Achr6G05710_001 I
GSMUA_Achr8G01730_001 Musa acuminata GSMUA_Achr8G01730_001 I
LPERR01G21480 Leersia perrieri LPERR01G21480 I
LPERR05G09130 Leersia perrieri LPERR05G09130 I
LPERR07G11260 Leersia perrieri LPERR07G11260 I
LPERR08G11030 Leersia perrieri LPERR08G11030 I
Lus10012870.g Linum usitatissimum Lus10012870.g I
Lus10029021.g Linum usitatissimum Lus10029021.g I
Lus10029022.g Linum usitatissimum Lus10029022.g I
Lus10030517.g Linum usitatissimum Lus10030517.g I
MDP0000175240 Malus domestica MDP0000175240 I
MDP0000460139 Malus domestica MDP0000460139 I
MDP0000828055 Malus domestica MDP0000828055 I
mgf002542m Mimulus guttatus mgf002542m I
mgf009193m Mimulus guttatus mgf009193m I
MLOC_17779 Hordeum vulgare MLOC_17779 I
MLOC_44455 Hordeum vulgare MLOC_44455 I
MLOC_79171 Hordeum vulgare MLOC_79171 I
MTR_2g075680 Medicago truncatula MTR_2g075680 I
MTR_3g093830 Medicago truncatula MTR_3g093830 I
MTR_7g073380 Medicago truncatula MTR_7g073380 I
MTR_7g073430 Medicago truncatula MTR_7g073430 I
MTR_8g027860 Medicago truncatula MTR_8g027860 I
OB0086G10030 Oryza brachyantha OB0086G10030 I
OB05G34020 Oryza brachyantha OB05G34020 I
OBART01G25160 Oryza barthii OBART01G25160 I
OBART05G11710 Oryza barthii OBART05G11710 I
OBART05G26430 Oryza barthii OBART05G26430 I
OGLUM01G28930 Oryza glumaepatula OGLUM01G28930 I
OGLUM05G12430 Oryza glumaepatula OGLUM05G12430 I
OGLUM05G28080 Oryza glumaepatula OGLUM05G28080 I
OLONG_010067 Oryza longistaminata OLONG_010067 I
OMERI01G22920 Oryza meridionalis OMERI01G22920 I
OMERI03G30520 Oryza meridionalis OMERI03G30520 I
OMERI05G10380 Oryza meridionalis OMERI05G10380 I
ONIVA01G28420 Oryza nivara ONIVA01G28420 I
ONIVA05G12100 Oryza nivara ONIVA05G12100 I
ONIVA05G28480 Oryza nivara ONIVA05G28480 I
ONIVA09G05410 Oryza nivara ONIVA09G05410 I
OPUNC01G25080 Oryza punctata OPUNC01G25080 I
OPUNC05G10020 Oryza punctata OPUNC05G10020 I
OPUNC05G24020 Oryza punctata OPUNC05G24020 I
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I
orange1.1g020291m.g Citrus sinensis orange1.1g020291m.g I
orange1.1g021598m.g Citrus sinensis orange1.1g021598m.g I
ORGLA01G0204900 Oryza glaberrima ORGLA01G0204900 I
ORGLA03G0413100 Oryza glaberrima ORGLA03G0413100 I
ORGLA05G0099400 Oryza glaberrima ORGLA05G0099400 I
ORGLA05G0229200 Oryza glaberrima ORGLA05G0229200 I
ORUFI01G28020 Oryza rufipogon ORUFI01G28020 I
ORUFI05G12710 Oryza rufipogon ORUFI05G12710 I
ORUFI05G28340 Oryza rufipogon ORUFI05G28340 I
ORUFI09G06720 Oryza rufipogon ORUFI09G06720 I
OS01G0656400 Oryza sativa OS01G0656400 I
OS05G0322900 Oryza sativa OS05G0322900 I
OS05G0571200 Oryza sativa OS05G0571200 I
OS09G0334500 Oryza sativa OS09G0334500 I
Pavir.Ba02544 Panicum virgatum Pavir.Ba02544 I
Pavir.Ba02750 Panicum virgatum Pavir.Ba02750 I
Pavir.Bb01218 Panicum virgatum Pavir.Bb01218 I
Pavir.Ca02012 Panicum virgatum Pavir.Ca02012 I
Pavir.Cb01173 Panicum virgatum Pavir.Cb01173 I
Pavir.J03334 Panicum virgatum Pavir.J03334 I
PDK_20s1440981g001 Phoenix dactylifera PDK_20s1440981g001 I
PDK_20s1519811g002 Phoenix dactylifera PDK_20s1519811g002 I
PDK_20s1571901g001 Phoenix dactylifera PDK_20s1571901g001 I
PGSC0003DMG400008391 Solanum tuberosum PGSC0003DMG400008391 I
PGSC0003DMG400020608 Solanum tuberosum PGSC0003DMG400020608 I
PGSC0003DMG400027582 Solanum tuberosum PGSC0003DMG400027582 I
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I
PK03324.1 Cannabis sativa PK03324.1 I
PK10616.1 Cannabis sativa PK10616.1 I
PK21378.1 Cannabis sativa PK21378.1 I
Pm019286 Prunus mume Pm019286 I
POPTR_0002s17010 Populus trichocarpa POPTR_0002s17010 I
POPTR_0006s10950 Populus trichocarpa POPTR_0006s10950 I
POPTR_0013s09470 Populus trichocarpa POPTR_0013s09470 I
POPTR_0014s09190 Populus trichocarpa POPTR_0014s09190 I
POPTR_0016s14490 Populus trichocarpa POPTR_0016s14490 I
PRUPE_ppa025912mg Prunus persica PRUPE_ppa025912mg I
PRUPE_ppa026125mg Prunus persica PRUPE_ppa026125mg I
SapurV1A.0013s0590 Salix purpurea SapurV1A.0013s0590 I
SapurV1A.0065s0580 Salix purpurea SapurV1A.0065s0580 I
SapurV1A.0356s0010 Salix purpurea SapurV1A.0356s0010 I
SapurV1A.0914s0120 Salix purpurea SapurV1A.0914s0120 I
Sb02g011050 Sorghum bicolor Sb02g011050 I
Sb02g022290 Sorghum bicolor Sb02g022290 I
Sb03g029920 Sorghum bicolor Sb03g029920 I
Sb08g005080 Sorghum bicolor Sb08g005080 I
SELMODRAFT_113487 Selaginella moellendorffii SELMODRAFT_113487 I
SELMODRAFT_29692 Selaginella moellendorffii SELMODRAFT_29692 I
Si022702m.g Setaria italica Si022702m.g I
Si022843m.g Setaria italica Si022843m.g I
Si030531m.g Setaria italica Si030531m.g I
Solyc03g095770.2 Solanum lycopersicum Solyc03g095770.2 I
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I
TCM_006109 Theobroma cacao TCM_006109 I
TCM_019689 Theobroma cacao TCM_019689 I
TCM_045556 Theobroma cacao TCM_045556 I
Thhalv10006146m.g Eutrema salsugineum Thhalv10006146m.g I
Thhalv10016713m.g Eutrema salsugineum Thhalv10016713m.g I
Thhalv10017926m.g Eutrema salsugineum Thhalv10017926m.g I
TRAES3BF051200110CFD_g Triticum aestivum TRAES3BF051200110CFD_g I
Traes_3AL_6E92D4E1F Triticum aestivum Traes_3AL_6E92D4E1F I
TRIUR3_29889 Triticum urartu TRIUR3_29889 I
WRKY55 Vitis vinifera VIT_13s0067g03130 I
VIT_13s0067g03140 Vitis vinifera VIT_13s0067g03140 I
VIT_15s0046g01140 Vitis vinifera VIT_15s0046g01140 I