SMU15010696 (Schmidtea mediterranea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 SMU15010696 T051687_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arnt
M01719_2.00 		Mus musculus
NNKCACGTGMNN
NNKCACGTGMNN		 PBM
Weirauch et al.(2014)
pTH5111 		0.889 0.870
tgo
M06005_2.00 		Drosophila melanogaster
RDDTCGTGAYY
RRTCACGAHHY		 B1H
Zhu et al.(2011)
dys_tgo_SANGER_5_FBgn0015014 		0.889 0.870
tgo
M06006_2.00 		Drosophila melanogaster
SDTTGCGTGAC
GTCACGCAAHS		 B1H
Zhu et al.(2011)
ss_tgo_SANGER_10_FBgn0015014 		0.889 0.870
tgo
M06007_2.00 		Drosophila melanogaster
KCACGTGAC
GTCACGTGM		 B1H
Zhu et al.(2011)
tgo_cyc_SANGER_5_FBgn0015014 		0.889 0.870
tgo
M06008_2.00 		Drosophila melanogaster
RTACGTGAC
GTCACGTAY		 B1H
Zhu et al.(2011)
tgo_sima_SANGER_5_FBgn0015014 		0.889 0.870
tgo
M06009_2.00 		Drosophila melanogaster
VWACGTGACY
RGTCACGTWB		 B1H
Zhu et al.(2011)
tgo_sim_SANGER_5_FBgn0015014 		0.889 0.870
tgo
M06010_2.00 		Drosophila melanogaster
TGCGTGAC
GTCACGCA		 B1H
Zhu et al.(2011)
tgo_ss_SANGER_5_FBgn0015014 		0.889 0.870
tgo
M06011_2.00 		Drosophila melanogaster
RCACGTGAC
GTCACGTGY		 B1H
Zhu et al.(2011)
tgo_tai_SANGER_5_FBgn0015014 		0.889 0.870
tgo
M06012_2.00 		Drosophila melanogaster
VTACGTGACB
VGTCACGTAB		 B1H
Zhu et al.(2011)
tgo_trh_SANGER_5_FBgn0015014 		0.889 0.870
ARNT
M08732_2.00 		Homo sapiens
NKRCGTGMN
NKCACGYMN		 Misc
Kulakovskiy et al.(2013)
ARNT_HUMAN.H11MO.0.B 		0.889 0.870
ARNT
M09459_2.00 		Homo sapiens
KCACGTNN
NNACGTGM		 Misc
Heinz et al.(2010)
T47D-HIF1b_GSE59937 		0.889 0.870
ARNT
M09863_2.00 		Homo sapiens
NVNNNCACGTGNHHHN
NDDDNCACGTGNNNBN		 Transfac
Matys et al.(2006)
V$ARNT_01 		0.889 0.870
ARNT
M09864_2.00 		Homo sapiens
VVNNNRKCACGTGMYNNNBB
VVNNNRKCACGTGMYNNNBB		 Transfac
Matys et al.(2006)
V$ARNT_02 		0.889 0.870
ARNT
M09865_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ARNT_Q6_01 		0.889 0.870
ARNT
M09866_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ARNT_Q6 		0.889 0.870
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15010696 bHLH 48 101

Links

Other bHLH family TFs
Other Schmidtea mediterranea TFs

133 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TGA10 Arabidopsis thaliana AT5G06839 D 0.000
BGIOSGA019942 Oryza indica BGIOSGA019942 I 0.000
Bo3g004060 Brassica oleracea Bo3g004060 I 0.000
Bo9g175780 Brassica oleracea Bo9g175780 I 0.000
Bostr.13129s0288 Boechera stricta Bostr.13129s0288 I 0.000
Bostr.26959s0025 Boechera stricta Bostr.26959s0025 I 0.000
Cagra.8005s0020 Capsella grandiflora Cagra.8005s0020 I 0.000
Carubv10003744m.g Capsella rubella Carubv10003744m.g I 0.000
Ciclev10031441m.g Citrus clementina Ciclev10031441m.g I 0.000
Eucgr.K01822 Eucalyptus grandis Eucgr.K01822 I 0.000
F775_16855 Aegilops tauschii F775_16855 I 0.000
F775_24386 Aegilops tauschii F775_24386 I 0.000
PAN Arabidopsis lyrata fgenesh2_kg.2__1120__AT1G68640.1 I 0.000
TGA10 Arabidopsis lyrata fgenesh2_kg.6__632__AT5G06839.2 I 0.000
GLYMA03G29825 Glycine max GLYMA03G29825 I 0.000
GLYMA19G32715 Glycine max GLYMA19G32715 I 0.000
GRMZM2G029979 Zea mays GRMZM2G029979 I 0.000
GSMUA_Achr11G14570_001 Musa acuminata GSMUA_Achr11G14570_001 I 0.000
LPERR05G14450 Leersia perrieri LPERR05G14450 I 0.000
MLOC_58614 Hordeum vulgare MLOC_58614 I 0.000
OB05G26080 Oryza brachyantha OB05G26080 I 0.000
OBART05G18270 Oryza barthii OBART05G18270 I 0.000
OGLUM05G19350 Oryza glumaepatula OGLUM05G19350 I 0.000
OLONG_005656 Oryza longistaminata OLONG_005656 I 0.000
OMERI05G15750 Oryza meridionalis OMERI05G15750 I 0.000
ONIVA05G19180 Oryza nivara ONIVA05G19180 I 0.000
orange1.1g018357m.g Citrus sinensis orange1.1g018357m.g I 0.000
ORGLA05G0158500 Oryza glaberrima ORGLA05G0158500 I 0.000
ORUFI05G19430 Oryza rufipogon ORUFI05G19430 I 0.000
OS05G0443900 Oryza sativa OS05G0443900 I 0.000
Pavir.Hb01807 Panicum virgatum Pavir.Hb01807 I 0.000
PDK_20s1405291g002 Phoenix dactylifera PDK_20s1405291g002 I 0.000
PDK_20s1736691g001 Phoenix dactylifera PDK_20s1736691g001 I 0.000
PGSC0003DMG400011430 Solanum tuberosum PGSC0003DMG400011430 I 0.000
PGSC0003DMG400023678 Solanum tuberosum PGSC0003DMG400023678 I 0.000
Solyc10g078670.1 Solanum lycopersicum Solyc10g078670.1 I 0.000
Solyc10g080410.1 Solanum lycopersicum Solyc10g080410.1 I 0.000
Solyc11g068370.1 Solanum lycopersicum Solyc11g068370.1 I 0.000
Thhalv10014032m.g Eutrema salsugineum Thhalv10014032m.g I 0.000
Traes_1AL_3B659AABA Triticum aestivum Traes_1AL_3B659AABA I 0.000
Traes_1DS_0CFC1995D Triticum aestivum Traes_1DS_0CFC1995D I 0.000
Traes_6AS_9916DDE4D Triticum aestivum Traes_6AS_9916DDE4D I 0.000
Traes_6BS_65CDD608F Triticum aestivum Traes_6BS_65CDD608F I 0.000
Traes_6DS_FD90D1145 Triticum aestivum Traes_6DS_FD90D1145 I 0.000