CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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snap_masked-nMf.1.1.scaf15800-processed-gene-0.1
(
Meloidogyne floridensis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
snap_masked-nMf.1.1.scaf15800-processed-gene-0.1
T054955_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
snap_masked-nMf.1.1.scaf15800-processed-gene-0.1-mRNA-1
bHLH
26
76
NLAAHNELEKNRRANLRGHLEALKSVLPPESDTHRDTTLSLLTRARNYIKM
Links
Other
bHLH
family TFs
Other
Meloidogyne floridensis
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgeneshMC_pg.C_10568
Mucor circinelloides
estExt_fgeneshMC_pg.C_10568
I
estExt_Genewise1.C_80340
Mucor circinelloides
estExt_Genewise1.C_80340
I
GLOINDRAFT_221110
Rhizophagus irregularis
GLOINDRAFT_221110
I
GLOINDRAFT_24118
Rhizophagus irregularis
GLOINDRAFT_24118
I
GLOINDRAFT_58638
Rhizophagus irregularis
GLOINDRAFT_58638
I
gw1.1.1257.1
Mucor circinelloides
gw1.1.1257.1
I
gw1.23.155.1
Phycomyces blakesleeanus
gw1.23.155.1
I
gw1.25.121.1
Phycomyces blakesleeanus
gw1.25.121.1
I
gw1.3.584.1
Phycomyces blakesleeanus
gw1.3.584.1
I
gw1.5.921.1
Mucor circinelloides
gw1.5.921.1
I
gw1.73.24.1
Phycomyces blakesleeanus
gw1.73.24.1
I
RO3G_01826
Rhizopus oryzae
RO3G_01826
I
RO3G_05801
Rhizopus oryzae
RO3G_05801
D
RO3G_13834
Rhizopus oryzae
RO3G_13834
I