ATF3 (Ochotona princeps)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSOPRG00000013252 T060839_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Atf3
M00758_2.00 		Mus musculus
NNRTKAYNN
NNRTMAYNN		 PBM
Weirauch et al.(2013)
pTH2684 		0.929 0.984
Atf3
M01807_2.00 		Mus musculus
GATGACGY
RCGTCATC		 PBM
Weirauch et al.(2014)
pTH5018 		0.929 0.984
Atf3
M08825_2.00 		Mus musculus
VTGACTCAB
VTGAGTCAB		 Misc
Kulakovskiy et al.(2013)
ATF3_MOUSE.H11MO.0.A 		0.929 0.984
JDP2
M02836_2.00 		Homo sapiens
ATGASTCAT
ATGASTCAT		 SELEX
Jolma et al.(2013)
JDP2_1 		0.881 0.742
JDP2
M02837_2.00 		Homo sapiens
NRTGACGTCATB
VATGACGTCAYN		 SELEX
Jolma et al.(2013)
JDP2_2 		0.881 0.742
JDP2
M02838_2.00 		Homo sapiens
ATGASTCAT
ATGASTCAT		 SELEX
Jolma et al.(2013)
JDP2_3 		0.881 0.742
JDP2
M02839_2.00 		Homo sapiens
NRTGACGTCATN
NATGACGTCAYN		 SELEX
Jolma et al.(2013)
JDP2_4 		0.881 0.742
JDP2
M04285_2.00 		Homo sapiens
NATGASTCATV
BATGASTCATN		 SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_1 		0.881 0.742
JDP2
M04286_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
JDP2_eDBD_HT-SELEX_2 		0.881 0.742
JDP2
M04289_2.00 		Homo sapiens
NRTGMSKCAYN
NRTGMSKCAYN		 SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_1 		0.881 0.742
JDP2
M04290_2.00 		Homo sapiens
NRTKACRTMAYN
NRTKAYGTMAYN		 SELEX
Yin et al.(2017)
JDP2_FL_HT-SELEX_2 		0.881 0.742
JDP2
M04287_2.00 		Homo sapiens
BATGASTCAYN
NRTGASTCATV		 SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_1 		0.881 0.742
JDP2
M04288_2.00 		Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN		 SELEX
Yin et al.(2017)
JDP2_eDBD_Methyl-HT-SELEX_2 		0.881 0.742
JDP2
M04291_2.00 		Homo sapiens
NRTGASTCAYN
NRTGASTCAYN		 SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_1 		0.881 0.742
JDP2
M04292_2.00 		Homo sapiens
NVTKACRTCAYN
NRTGAYGTMABN		 SELEX
Yin et al.(2017)
JDP2_FL_Methyl-HT-SELEX_2 		0.881 0.742
Jdp2
M00125_2.00 		Mus musculus
NRTGAYDNNN
NNNHRTCAYN		 PBM
Badis et al.(2009)
Jundm2_0911 		0.879 0.742
Jdp2
M01810_2.00 		Mus musculus
NNTGACGYMW
WKRCGTCANN		 PBM
Weirauch et al.(2014)
pTH5464 		0.879 0.742
Jdp2
M02861_2.00 		Mus musculus
ATGASTCAT
ATGASTCAT		 SELEX
Jolma et al.(2013)
Jdp2_1 		0.879 0.742
Jdp2
M02862_2.00 		Mus musculus
VATGACGTCAYN
NRTGACGTCATB		 SELEX
Jolma et al.(2013)
Jdp2_2 		0.879 0.742
Jdp2
M10033_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$JDP2_03 		0.879 0.742
ATF3
M04321_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF3_eDBD_HT-SELEX 		0.823 0.532
ATF3
M04323_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF3_FL_HT-SELEX 		0.823 0.532
ATF3
M04032_2.00 		Homo sapiens
RTGACGTCAK
MTGACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
ATF3.1 		0.823 0.532
ATF3
M04033_2.00 		Homo sapiens
RTGACTCAY
RTGAGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
ATF3.2 		0.823 0.532
ATF3
M07822_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
GM12878_ATF3_HudsonAlpha 		0.823 0.532
ATF3
M07823_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_ATF3_HudsonAlpha 		0.823 0.532
ATF3
M07824_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
HepG2_ATF3_HudsonAlpha 		0.823 0.532
ATF3
M07825_2.00 		Homo sapiens
VRTSACGTVR
YBACGTSAYB		 ChIP-seq
Gerstein et al.(2012)
K562_ATF3_Harvard 		0.823 0.532
ATF3
M08187_2.00 		Homo sapiens
GTCACGTG
CACGTGAC		 ChIP-seq
Contrino et al.(2012)
Mv41 		0.823 0.532
ATF3
M08188_2.00 		Homo sapiens
NRTGASTCAY
RTGASTCAYN		 ChIP-seq
Contrino et al.(2012)
Mv43 		0.823 0.532
ATF3
M08801_2.00 		Homo sapiens
RRTSACGTVRB
VYBACGTSAYY		 Misc
Kulakovskiy et al.(2013)
ATF3_HUMAN.H11MO.0.A 		0.823 0.532
ATF3
M09489_2.00 		Homo sapiens
NVTGASTCABNN
NNVTGASTCABN		 Misc
Heinz et al.(2010)
GBM-ATF3_GSE33912 		0.823 0.532
ATF3
M09977_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_02 		0.823 0.532
ATF3
M09978_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_05 		0.823 0.532
ATF3
M09979_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_Q6_01 		0.823 0.532
ATF3
M09980_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_Q6_02 		0.823 0.532
ATF3
M09981_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_Q6 		0.823 0.532
ATF3
M04322_2.00 		Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN		 SELEX
Yin et al.(2017)
ATF3_eDBD_Methyl-HT-SELEX 		0.823 0.532
ATF3
M04324_2.00 		Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN		 SELEX
Yin et al.(2017)
ATF3_FL_Methyl-HT-SELEX 		0.823 0.532
Atf3
M03648_2.00 		Drosophila melanogaster
NRTKACGTMAYN
NRTKACGTMAYN		 SELEX
Nitta et al.(2015)
Atf3_1 		0.789 0.565
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOPRP00000012082 bZIP 84 145

Links

Other bZIP family TFs
Other Ochotona princeps TFs

171 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAH77429 Xenopus laevis AAH77429 I 0.000
Aan_R002310 Calypte anna Aan_R002310 I 0.000
Afo_R005722 Aptenodytes forsteri Afo_R005722 I 0.000
Brh_R003908 Buceros rhinoceros Brh_R003908 I 0.000
THAP1 Anolis carolinensis ENSACAG00000005705 I 0.000
ENSAMEG00000004992 Ailuropoda melanoleuca ENSAMEG00000004992 I 0.000
ENSAMXG00000007136 Astyanax mexicanus ENSAMXG00000007136 I 0.000
THAP1 Bos taurus ENSBTAG00000007629 I 0.000
ENSBTAP00000010035-D1 Bos grunniens ENSBTAP00000010035-D1 I 0.000
THAP1 Canis familiaris ENSCAFG00000005418 I 0.000
ENSCHOG00000005457 Choloepus hoffmanni ENSCHOG00000005457 I 0.000
ENSCHOG00000005563 Choloepus hoffmanni ENSCHOG00000005563 I 0.000
THAP1 Callithrix jacchus ENSCJAG00000003466 I 0.000
ENSCPOG00000021608 Cavia porcellus ENSCPOG00000021608 I 0.000
ENSCSAG00000014961 Chlorocebus sabaeus ENSCSAG00000014961 I 0.000
THAP1 Dasypus novemcinctus ENSDNOG00000047233 I 0.000
ENSDORG00000014207 Dipodomys ordii ENSDORG00000014207 I 0.000
THAP1 Equus caballus ENSECAG00000000020 I 0.000
THAP1 Erinaceus europaeus ENSEEUG00000003332 I 0.000
THAP1 Echinops telfairi ENSETEG00000018764 I 0.000
ENSFALG00000005181 Ficedula albicollis ENSFALG00000005181 I 0.000
THAP1 Felis catus ENSFCAG00000027837 I 0.000
THAP1 Homo sapiens ENSG00000131931 D 0.000
thap1 Gasterosteus aculeatus ENSGACG00000018371 I 0.000
THAP1 Gallus gallus ENSGALG00000015385 I 0.000
THAP1 Gorilla gorilla ENSGGOG00000022708 I 0.000
ENSLACG00000000288 Latimeria chalumnae ENSLACG00000000288 I 0.000
ENSLACG00000003453 Latimeria chalumnae ENSLACG00000003453 I 0.000
THAP1 Loxodonta africana ENSLAFG00000003647 I 0.000
ENSLOCG00000003237 Lepisosteus oculatus ENSLOCG00000003237 I 0.000
THAP1 Myotis lucifugus ENSMLUG00000003837 I 0.000
ENSMMUG00000000162 Macaca mulatta ENSMMUG00000000162 I 0.000
THAP1 Monodelphis domestica ENSMODG00000010093 I 0.000
Thap1 Mus musculus ENSMUSG00000037214 I 0.000
ENSNLEG00000012946 Nomascus leucogenys ENSNLEG00000012946 I 0.000
THAP1 Ornithorhynchus anatinus ENSOANG00000000699 I 0.000
ENSOARG00000003516 Ovis aries ENSOARG00000003516 I 0.000
THAP1 Oryctolagus cuniculus ENSOCUG00000001391 I 0.000
THAP1 Otolemur garnettii ENSOGAG00000002708 I 0.000
ENSONIG00000012619 Oreochromis niloticus ENSONIG00000012619 I 0.000
thap1 Oryzias latipes ENSORLG00000018779 I 0.000
ENSP00000254250 Macaca fascicularis ENSP00000254250 I 0.000
ENSPANG00000007346 Papio anubis ENSPANG00000007346 I 0.000
ENSPFOG00000004261 Poecilia formosa ENSPFOG00000004261 I 0.000
THAP1 Pan troglodytes ENSPTRG00000020211 I 0.000
Thap1 Rattus norvegicus ENSRNOG00000056956 I 0.000
ENSSSCG00000027223 Sus scrofa ENSSSCG00000027223 I 0.000
ENSSTOG00000023122 Ictidomys tridecemlineatus ENSSTOG00000023122 I 0.000
ENSTSYG00000006585 Tarsius syrichta ENSTSYG00000006585 I 0.000
THAP1 Tursiops truncatus ENSTTRG00000008823 I 0.000
THAP1 Vicugna pacos ENSVPAG00000001157 I 0.000
ENSXMAG00000003907 Xiphophorus maculatus ENSXMAG00000003907 I 0.000
Myotis_brandtii_thap1_10030544 Myotis brandtii Myotis_brandtii_thap1_10030544 I 0.000
Pvit_16121 Pogona vitticeps Pvit_16121 I 0.000
Tal_R008759 Tyto alba Tal_R008759 I 0.000
thap1 Xenopus tropicalis XB-GENE-1008758 I 0.000
thap1.L Xenopus laevis XB-GENE-1008764 I 0.000