atf6 (Takifugu rubripes)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSTRUG00000006660 T061655_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATF6B
M04375_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_1 		0.823 0.594
ATF6B
M04376_2.00 		Homo sapiens
NRTGACGTGGCR
YGCCACGTCAYN		 SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_2 		0.823 0.594
ATF6B
M04377_2.00 		Homo sapiens
TGCCACGTGGCR
YGCCACGTGGCA		 SELEX
Yin et al.(2017)
ATF6B_eDBD_HT-SELEX_3 		0.823 0.594
ATF6B
M04041_2.00 		Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.1 		0.823 0.594
ATF6B
M04042_2.00 		Homo sapiens
YGMCACGTGKCR
YGMCACGTGKCR		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.2 		0.823 0.594
ATF6B
M04043_2.00 		Homo sapiens
RTGACGTCAYC
GRTGACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.3 		0.823 0.594
ATF6B
M04044_2.00 		Homo sapiens
MCCACGATGT
ACATCGTGGK		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6B.4 		0.823 0.594
ATF6B
M04378_2.00 		Homo sapiens
SRTGACGTCAYB
VRTGACGTCAYS		 SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_1 		0.823 0.594
ATF6B
M04379_2.00 		Homo sapiens
BRTGACGTGGCR
YGCCACGTCAYV		 SELEX
Yin et al.(2017)
ATF6B_eDBD_Methyl-HT-SELEX_2 		0.823 0.594
ATF6
M04254_2.00 		Homo sapiens
YKRTGACGTGGCAN
NTGCCACGTCAYMR		 SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_1 		0.818 0.703
ATF6
M04255_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF6_eDBD_HT-SELEX_2 		0.818 0.703
ATF6
M04018_2.00 		Homo sapiens
GRTGACGTGGCR
YGCCACGTCAYC		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.1 		0.818 0.703
ATF6
M04019_2.00 		Homo sapiens
KAGTCACGTGK
MCACGTGACTM		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.2 		0.818 0.703
ATF6
M04020_2.00 		Homo sapiens
BNRTGACGTCATCA
TGATGACGTCAYNV		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.3 		0.818 0.703
ATF6
M04021_2.00 		Homo sapiens
ACCACGATGTY
RACATCGTGGT		 SELEX
Rodriguez-Martinez et al.(2017)
ATF6.4 		0.818 0.703
ATF6
M08790_2.00 		Homo sapiens
VBSSTGACGTGG
CCACGTCASSVB		 Misc
Kulakovskiy et al.(2013)
ATF6A_HUMAN.H11MO.0.B 		0.818 0.703
ATF6
M09947_2.00 		Homo sapiens
TGACGTGG
CCACGTCA		 Transfac
Matys et al.(2006)
V$ATF6_01 		0.818 0.703
ATF6
M04256_2.00 		Homo sapiens
YGRTGACGTGGCRN
NYGCCACGTCAYCR		 SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_1 		0.818 0.703
ATF6
M04257_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF6_eDBD_Methyl-HT-SELEX_2 		0.818 0.703
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000016370 bZIP 1 64
ENSTRUP00000016371 bZIP 260 323
ENSTRUP00000016372 bZIP 261 324
ENSTRUP00000016373 bZIP 267 330
ENSTRUP00000016374 bZIP 116 179

Links

Other bZIP family TFs
Other Takifugu rubripes TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R000616 Calypte anna Aan_R000616 I
Aan_R006276 Calypte anna Aan_R006276 I
Afo_R004626 Aptenodytes forsteri Afo_R004626 I
Afo_R011357 Aptenodytes forsteri Afo_R011357 I
Alligator_sinensis_CCG008166.1 Alligator sinensis Alligator_sinensis_CCG008166.1 I
Cmyd_10008592 Chelonia mydas Cmyd_10008592 I
Cmyd_10012109 Chelonia mydas Cmyd_10012109 I
ENSACAG00000013085 Anolis carolinensis ENSACAG00000013085 I
BCL11A Anolis carolinensis ENSACAG00000015159 I
ENSAMEG00000015813 Ailuropoda melanoleuca ENSAMEG00000015813 I
ENSAMXG00000004597 Astyanax mexicanus ENSAMXG00000004597 I
ENSAMXG00000015839 Astyanax mexicanus ENSAMXG00000015839 I
ENSAMXG00000018130 Astyanax mexicanus ENSAMXG00000018130 I
ENSAPLG00000006283 Anas platyrhynchos ENSAPLG00000006283 I
ENSAPLG00000007735 Anas platyrhynchos ENSAPLG00000007735 I
BCL11B Bos taurus ENSBTAG00000018019 I
ENSBTAP00000023987-D2 Bos grunniens ENSBTAP00000023987-D2 I
BCL11B Canis familiaris ENSCAFG00000017809 I
BCL11B Callithrix jacchus ENSCJAG00000006713 I
BCL11A Callithrix jacchus ENSCJAG00000009226 I
BCL11A Cavia porcellus ENSCPOG00000007587 I
ENSCPOG00000009946 Cavia porcellus ENSCPOG00000009946 I
ENSCSAG00000010477 Chlorocebus sabaeus ENSCSAG00000010477 I
bcl11aa Danio rerio ENSDARG00000061352 I
bcl11ab Danio rerio ENSDARG00000063153 I
im:7142702 Danio rerio ENSDARG00000067727 I
BCL11B Dasypus novemcinctus ENSDNOG00000012677 I
BCL11A Dasypus novemcinctus ENSDNOG00000019842 I
Bcl11a Dipodomys ordii ENSDORG00000010064 I
BCL11A Erinaceus europaeus ENSEEUG00000010958 I
ENSFALG00000011123 Ficedula albicollis ENSFALG00000011123 I
BCL11A Felis catus ENSFCAG00000027154 I
BCL11A Homo sapiens ENSG00000119866 D
BCL11B Homo sapiens ENSG00000127152 D
im:7142702 Gasterosteus aculeatus ENSGACG00000005537 I
bcl11ba Gasterosteus aculeatus ENSGACG00000013118 I
bcl11aa Gasterosteus aculeatus ENSGACG00000013419 I
bcl11ab Gasterosteus aculeatus ENSGACG00000019222 I
ENSGALG00000007866 Gallus gallus ENSGALG00000007866 I
ENSGALG00000011127 Gallus gallus ENSGALG00000011127 I
ENSGALG00000028278 Gallus gallus ENSGALG00000028278 I
BCL11B Gorilla gorilla ENSGGOG00000001232 I
BCL11A Gorilla gorilla ENSGGOG00000007337 I
ENSGMOG00000012414 Gadus morhua ENSGMOG00000012414 I
ENSGMOG00000015842 Gadus morhua ENSGMOG00000015842 I
ENSLACG00000003560 Latimeria chalumnae ENSLACG00000003560 I
BCL11A Loxodonta africana ENSLAFG00000003101 I
BCL11B Loxodonta africana ENSLAFG00000009254 I
ENSLOCG00000008679 Lepisosteus oculatus ENSLOCG00000008679 I
ENSLOCG00000016135 Lepisosteus oculatus ENSLOCG00000016135 I
ENSMEUG00000001829 Macropus eugenii ENSMEUG00000001829 I
BCL11A Meleagris gallopavo ENSMGAG00000013042 I
BCL11A Microcebus murinus ENSMICG00000015052 I
BCL11B Macaca mulatta ENSMMUG00000003261 I
ENSMMUG00000011303 Macaca mulatta ENSMMUG00000011303 I
BCL11B Monodelphis domestica ENSMODG00000012964 I
Bcl11a Mus musculus ENSMUSG00000000861 I
Bcl11b Mus musculus ENSMUSG00000048251 I
ENSNLEG00000000711 Nomascus leucogenys ENSNLEG00000000711 I
BCL11A Ornithorhynchus anatinus ENSOANG00000012402 I
BCL11B Ornithorhynchus anatinus ENSOANG00000014770 I
BCL11A Oryctolagus cuniculus ENSOCUG00000023948 I
ENSOCUG00000024296 Oryctolagus cuniculus ENSOCUG00000024296 I
BCL11B Otolemur garnettii ENSOGAG00000033204 I
ENSONIG00000001067 Oreochromis niloticus ENSONIG00000001067 I
ENSONIG00000002906 Oreochromis niloticus ENSONIG00000002906 I
ENSONIG00000011060 Oreochromis niloticus ENSONIG00000011060 I
ENSONIG00000018855 Oreochromis niloticus ENSONIG00000018855 I
bcl11aa Oryzias latipes ENSORLG00000001704 I
im:7142702 Oryzias latipes ENSORLG00000010488 I
bcl11ba Oryzias latipes ENSORLG00000010826 I
bcl11ab Oryzias latipes ENSORLG00000013169 I
ENSP00000338774 Macaca fascicularis ENSP00000338774 I
ENSP00000349723 Macaca fascicularis ENSP00000349723 I
ENSPANG00000004313 Papio anubis ENSPANG00000004313 I
ENSPFOG00000003609 Poecilia formosa ENSPFOG00000003609 I
ENSPFOG00000007224 Poecilia formosa ENSPFOG00000007224 I
ENSPFOG00000007302 Poecilia formosa ENSPFOG00000007302 I
ENSPFOG00000019062 Poecilia formosa ENSPFOG00000019062 I
ENSPPYG00000006131 Pongo abelii ENSPPYG00000006131 I
ENSPSIG00000013079 Pelodiscus sinensis ENSPSIG00000013079 I
ENSPSIG00000013644 Pelodiscus sinensis ENSPSIG00000013644 I
BCL11B Pan troglodytes ENSPTRG00000006707 I
BCL11A Pteropus vampyrus ENSPVAG00000000042 I
BCL11B Pteropus vampyrus ENSPVAG00000015516 I
Bcl11b Rattus norvegicus ENSRNOG00000005776 I
Bcl11a Rattus norvegicus ENSRNOG00000007049 I
ENSSHAG00000009291 Sarcophilus harrisii ENSSHAG00000009291 I
ENSSHAG00000015804 Sarcophilus harrisii ENSSHAG00000015804 I
BCL11B Sus scrofa ENSSSCG00000002507 I
BCL11A Sus scrofa ENSSSCG00000008392 I
ENSSTOG00000004523 Ictidomys tridecemlineatus ENSSTOG00000004523 I
ENSSTOG00000021531 Ictidomys tridecemlineatus ENSSTOG00000021531 I
BCL11A Taeniopygia guttata ENSTGUG00000006790 I
BCL11B Taeniopygia guttata ENSTGUG00000012711 I
bcl11ba Tetraodon nigroviridis ENSTNIG00000008283 I
bcl11ab Tetraodon nigroviridis ENSTNIG00000012076 I
bcl11ba Takifugu rubripes ENSTRUG00000003531 I
bcl11aa Takifugu rubripes ENSTRUG00000003815 I
bcl11ab Takifugu rubripes ENSTRUG00000013751 I
im:7142702 Takifugu rubripes ENSTRUG00000018074 I
ENSTSYG00000009153 Tarsius syrichta ENSTSYG00000009153 I
BCL11A Tursiops truncatus ENSTTRG00000006191 I
BCL11B Tursiops truncatus ENSTTRG00000012140 I
BCL11A Vicugna pacos ENSVPAG00000000491 I
ENSXMAG00000007242 Xiphophorus maculatus ENSXMAG00000007242 I
ENSXMAG00000019910 Xiphophorus maculatus ENSXMAG00000019910 I
ENSXMAG00000020344 Xiphophorus maculatus ENSXMAG00000020344 I
Gfo_R006733 Geospiza fortis Gfo_R006733 I
Gfo_R008167 Geospiza fortis Gfo_R008167 I
HHAL008065-PA Halyomorpha halys HHAL008065-PA I
ISCW016418 Ixodes scapularis ISCW016418 I
L798_02171 Zootermopsis nevadensis L798_02171 I
LotgiG139415 Lottia gigantea LotgiG139415 I
Ocbimv22018271m.g Octopus bimaculoides Ocbimv22018271m.g I
PHUM606430 Pediculus humanus PHUM606430 I
Pvit_09536 Pogona vitticeps Pvit_09536 I
Pvit_18645 Pogona vitticeps Pvit_18645 I
RPRC001562 Rhodnius prolixus RPRC001562 I
Sakowv30026316m.g Saccoglossus kowalevskii Sakowv30026316m.g I
SMAR003355 Strigamia maritima SMAR003355 I
SPU_018909 Strongylocentrotus purpuratus SPU_018909 I
bcl11a Xenopus tropicalis XB-GENE-486641 I