LotgiG139415 (Lottia gigantea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 LotgiG139415 T121672_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.777 0.850
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.777 0.850
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.760 0.841
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.760 0.841
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.760 0.841
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LotgiP139415 C2H2 ZF 76 97
LotgiP139415 C2H2 ZF 103 125
LotgiP139415 C2H2 ZF 204 226
LotgiP139415 C2H2 ZF 232 254
LotgiP139415 C2H2 ZF 262 283

Links

Other C2H2 ZF family TFs
Other Lottia gigantea TFs

122 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ocbimv22018271m.g Octopus bimaculoides Ocbimv22018271m.g I 0.783
SMAR003355 Strigamia maritima SMAR003355 I 0.781
ENSACAG00000013085 Anolis carolinensis ENSACAG00000013085 I 0.777
ENSAMXG00000015839 Astyanax mexicanus ENSAMXG00000015839 I 0.777
ENSAPLG00000006283 Anas platyrhynchos ENSAPLG00000006283 I 0.777
BCL11B Bos taurus ENSBTAG00000018019 I 0.777
BCL11B Canis familiaris ENSCAFG00000017809 I 0.777
BCL11B Callithrix jacchus ENSCJAG00000006713 I 0.777
ENSCPOG00000009946 Cavia porcellus ENSCPOG00000009946 I 0.777
ENSCSAG00000010477 Chlorocebus sabaeus ENSCSAG00000010477 I 0.777
BCL11B Dasypus novemcinctus ENSDNOG00000012677 I 0.777
BCL11B Homo sapiens ENSG00000127152 D 0.777
ENSGALG00000011127 Gallus gallus ENSGALG00000011127 I 0.777
ENSGALG00000028278 Gallus gallus ENSGALG00000028278 I 0.777
BCL11B Gorilla gorilla ENSGGOG00000001232 I 0.777
BCL11B Loxodonta africana ENSLAFG00000009254 I 0.777
BCL11B Macaca mulatta ENSMMUG00000003261 I 0.777
BCL11B Monodelphis domestica ENSMODG00000012964 I 0.777
Bcl11b Mus musculus ENSMUSG00000048251 I 0.777
ENSNLEG00000000711 Nomascus leucogenys ENSNLEG00000000711 I 0.777
BCL11B Ornithorhynchus anatinus ENSOANG00000014770 I 0.777
BCL11B Otolemur garnettii ENSOGAG00000033204 I 0.777
im:7142702 Oryzias latipes ENSORLG00000010488 I 0.777
ENSPANG00000004313 Papio anubis ENSPANG00000004313 I 0.777
ENSPPYG00000006131 Pongo abelii ENSPPYG00000006131 I 0.777
ENSPSIG00000013079 Pelodiscus sinensis ENSPSIG00000013079 I 0.777
BCL11B Pan troglodytes ENSPTRG00000006707 I 0.777
BCL11B Pteropus vampyrus ENSPVAG00000015516 I 0.777
Bcl11b Rattus norvegicus ENSRNOG00000005776 I 0.777
ENSSHAG00000009291 Sarcophilus harrisii ENSSHAG00000009291 I 0.777
BCL11B Sus scrofa ENSSSCG00000002507 I 0.777
ENSSTOG00000021531 Ictidomys tridecemlineatus ENSSTOG00000021531 I 0.777
BCL11B Taeniopygia guttata ENSTGUG00000012711 I 0.777
Aan_R000616 Calypte anna Aan_R000616 I 0.777
Afo_R004626 Aptenodytes forsteri Afo_R004626 I 0.777
Cmyd_10012109 Chelonia mydas Cmyd_10012109 I 0.777
Gfo_R006733 Geospiza fortis Gfo_R006733 I 0.777
Pvit_09536 Pogona vitticeps Pvit_09536 I 0.777
ENSAMXG00000018130 Astyanax mexicanus ENSAMXG00000018130 I 0.775
im:7142702 Danio rerio ENSDARG00000067727 I 0.775
im:7142702 Gasterosteus aculeatus ENSGACG00000005537 I 0.775
ENSPFOG00000003609 Poecilia formosa ENSPFOG00000003609 I 0.775
ENSXMAG00000019910 Xiphophorus maculatus ENSXMAG00000019910 I 0.775
Sakowv30026316m.g Saccoglossus kowalevskii Sakowv30026316m.g I 0.775
ENSONIG00000001067 Oreochromis niloticus ENSONIG00000001067 I 0.773
im:7142702 Takifugu rubripes ENSTRUG00000018074 I 0.773
PHUM606430 Pediculus humanus PHUM606430 I 0.773
ENSP00000349723 Macaca fascicularis ENSP00000349723 I 0.773
BCL11B Tursiops truncatus ENSTTRG00000012140 I 0.772
bcl11ba Gasterosteus aculeatus ENSGACG00000013118 I 0.769
ENSGMOG00000012414 Gadus morhua ENSGMOG00000012414 I 0.769
ENSPFOG00000007224 Poecilia formosa ENSPFOG00000007224 I 0.769
ENSXMAG00000020344 Xiphophorus maculatus ENSXMAG00000020344 I 0.769
ISCW016418 Ixodes scapularis ISCW016418 I 0.769
RPRC001562 Rhodnius prolixus RPRC001562 I 0.769
bcl11ab Gasterosteus aculeatus ENSGACG00000019222 I 0.768
ENSGMOG00000015842 Gadus morhua ENSGMOG00000015842 I 0.768
ENSLOCG00000016135 Lepisosteus oculatus ENSLOCG00000016135 I 0.768
ENSLOCG00000008679 Lepisosteus oculatus ENSLOCG00000008679 I 0.767
ENSONIG00000011060 Oreochromis niloticus ENSONIG00000011060 I 0.767
bcl11ba Oryzias latipes ENSORLG00000010826 I 0.767
bcl11ba Tetraodon nigroviridis ENSTNIG00000008283 I 0.767
bcl11ba Takifugu rubripes ENSTRUG00000003531 I 0.767
ENSOCUG00000024296 Oryctolagus cuniculus ENSOCUG00000024296 I 0.766
BGLB012676 Biomphalaria glabrata BGLB012676 I 0.766
ACYPI007319 Acyrthosiphon pisum ACYPI007319 I 0.765
bcl11aa Danio rerio ENSDARG00000061352 I 0.765
bcl11ab Danio rerio ENSDARG00000063153 I 0.765
ENSONIG00000018855 Oreochromis niloticus ENSONIG00000018855 I 0.765
bcl11ab Oryzias latipes ENSORLG00000013169 I 0.765
ENSPFOG00000007302 Poecilia formosa ENSPFOG00000007302 I 0.765
bcl11ab Tetraodon nigroviridis ENSTNIG00000012076 I 0.765
bcl11ab Takifugu rubripes ENSTRUG00000013751 I 0.765
CapteG65449 Capitella teleta CapteG65449 I 0.764
L798_02171 Zootermopsis nevadensis L798_02171 I 0.764
HHAL008065-PA Halyomorpha halys HHAL008065-PA I 0.762
BCL11A Anolis carolinensis ENSACAG00000015159 I 0.760
ENSAMEG00000015813 Ailuropoda melanoleuca ENSAMEG00000015813 I 0.760
ENSAPLG00000007735 Anas platyrhynchos ENSAPLG00000007735 I 0.760
BCL11A Callithrix jacchus ENSCJAG00000009226 I 0.760
BCL11A Cavia porcellus ENSCPOG00000007587 I 0.760
BCL11A Dasypus novemcinctus ENSDNOG00000019842 I 0.760
Bcl11a Dipodomys ordii ENSDORG00000010064 I 0.760
BCL11A Erinaceus europaeus ENSEEUG00000010958 I 0.760
ENSFALG00000011123 Ficedula albicollis ENSFALG00000011123 I 0.760
BCL11A Felis catus ENSFCAG00000027154 I 0.760
BCL11A Homo sapiens ENSG00000119866 D 0.760
ENSGALG00000007866 Gallus gallus ENSGALG00000007866 I 0.760
BCL11A Gorilla gorilla ENSGGOG00000007337 I 0.760
ENSLACG00000003560 Latimeria chalumnae ENSLACG00000003560 I 0.760
BCL11A Loxodonta africana ENSLAFG00000003101 I 0.760
ENSMEUG00000001829 Macropus eugenii ENSMEUG00000001829 I 0.760
BCL11A Meleagris gallopavo ENSMGAG00000013042 I 0.760
BCL11A Microcebus murinus ENSMICG00000015052 I 0.760
ENSMMUG00000011303 Macaca mulatta ENSMMUG00000011303 I 0.760
Bcl11a Mus musculus ENSMUSG00000000861 I 0.760
BCL11A Ornithorhynchus anatinus ENSOANG00000012402 I 0.760
BCL11A Oryctolagus cuniculus ENSOCUG00000023948 I 0.760
ENSPSIG00000013644 Pelodiscus sinensis ENSPSIG00000013644 I 0.760
BCL11A Pteropus vampyrus ENSPVAG00000000042 I 0.760
Bcl11a Rattus norvegicus ENSRNOG00000007049 I 0.760
ENSSHAG00000015804 Sarcophilus harrisii ENSSHAG00000015804 I 0.760
BCL11A Sus scrofa ENSSSCG00000008392 I 0.760
ENSSTOG00000004523 Ictidomys tridecemlineatus ENSSTOG00000004523 I 0.760
BCL11A Taeniopygia guttata ENSTGUG00000006790 I 0.760
im:7142702 Tetraodon nigroviridis ENSTNIG00000009693 I 0.760
ENSTSYG00000009153 Tarsius syrichta ENSTSYG00000009153 I 0.760
BCL11A Tursiops truncatus ENSTTRG00000006191 I 0.760
BCL11A Vicugna pacos ENSVPAG00000000491 I 0.760
Aan_R006276 Calypte anna Aan_R006276 I 0.760
Afo_R011357 Aptenodytes forsteri Afo_R011357 I 0.760
Alligator_sinensis_CCG008166.1 Alligator sinensis Alligator_sinensis_CCG008166.1 I 0.760
Cmyd_10008592 Chelonia mydas Cmyd_10008592 I 0.760
ENSBTAP00000023987-D2 Bos grunniens ENSBTAP00000023987-D2 I 0.760
ENSP00000338774 Macaca fascicularis ENSP00000338774 I 0.760
Gfo_R008167 Geospiza fortis Gfo_R008167 I 0.760
Pvit_18645 Pogona vitticeps Pvit_18645 I 0.760
bcl11a Xenopus tropicalis XB-GENE-486641 I 0.760
ENSAMXG00000004597 Astyanax mexicanus ENSAMXG00000004597 I 0.758
SPU_018909 Strongylocentrotus purpuratus SPU_018909 I 0.758
bcl11aa Takifugu rubripes ENSTRUG00000003815 I 0.756
ENSXMAG00000007242 Xiphophorus maculatus ENSXMAG00000007242 I 0.756