CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSTOG00000021531
(
Ictidomys tridecemlineatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSTOG00000021531
T110849_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BCL11B
M04453_2.00
Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX
0.827
1.000
BCL11B
M04454_2.00
Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX
0.827
1.000
BCL11A
M07926_2.00
Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV
ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha
0.806
0.947
BCL11A
M08881_2.00
Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV
Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A
0.806
0.947
BCL11A
M10187_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BCL11A_02
0.806
0.947
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSTOP00000022911
C2H2 ZF
427
448
SCEFCGKTFKFQSNLIVHRRSH
ENSSTOP00000022911
C2H2 ZF
454
476
YKCQLCDHACSQASKLKRHMKTH
ENSSTOP00000022911
C2H2 ZF
796
818
DTCEYCGKVFKNCSNLTVHRRSH
ENSSTOP00000022911
C2H2 ZF
824
846
YKCELCNYACAQSSKLTRHMKTH
ENSSTOP00000022911
C2H2 ZF
854
877
YRCDICQMPFSVYSTLEKHMKKWH
Links
Other
C2H2 ZF
family TFs
Other
Ictidomys tridecemlineatus
TFs
127 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSACAG00000013085
Anolis carolinensis
ENSACAG00000013085
I
0.827
ENSAMXG00000015839
Astyanax mexicanus
ENSAMXG00000015839
I
0.827
ENSAPLG00000006283
Anas platyrhynchos
ENSAPLG00000006283
I
0.827
BCL11B
Bos taurus
ENSBTAG00000018019
I
0.827
BCL11B
Canis familiaris
ENSCAFG00000017809
I
0.827
BCL11B
Callithrix jacchus
ENSCJAG00000006713
I
0.827
ENSCPOG00000009946
Cavia porcellus
ENSCPOG00000009946
I
0.827
ENSCSAG00000010477
Chlorocebus sabaeus
ENSCSAG00000010477
I
0.827
BCL11B
Dasypus novemcinctus
ENSDNOG00000012677
I
0.827
BCL11B
Homo sapiens
ENSG00000127152
D
0.827
ENSGALG00000011127
Gallus gallus
ENSGALG00000011127
I
0.827
ENSGALG00000028278
Gallus gallus
ENSGALG00000028278
I
0.827
BCL11B
Gorilla gorilla
ENSGGOG00000001232
I
0.827
BCL11B
Loxodonta africana
ENSLAFG00000009254
I
0.827
BCL11B
Macaca mulatta
ENSMMUG00000003261
I
0.827
BCL11B
Monodelphis domestica
ENSMODG00000012964
I
0.827
Bcl11b
Mus musculus
ENSMUSG00000048251
I
0.827
ENSNLEG00000000711
Nomascus leucogenys
ENSNLEG00000000711
I
0.827
BCL11B
Ornithorhynchus anatinus
ENSOANG00000014770
I
0.827
BCL11B
Otolemur garnettii
ENSOGAG00000033204
I
0.827
ENSPANG00000004313
Papio anubis
ENSPANG00000004313
I
0.827
ENSPPYG00000006131
Pongo abelii
ENSPPYG00000006131
I
0.827
ENSPSIG00000013079
Pelodiscus sinensis
ENSPSIG00000013079
I
0.827
BCL11B
Pan troglodytes
ENSPTRG00000006707
I
0.827
BCL11B
Pteropus vampyrus
ENSPVAG00000015516
I
0.827
Bcl11b
Rattus norvegicus
ENSRNOG00000005776
I
0.827
ENSSHAG00000009291
Sarcophilus harrisii
ENSSHAG00000009291
I
0.827
BCL11B
Sus scrofa
ENSSSCG00000002507
I
0.827
BCL11B
Taeniopygia guttata
ENSTGUG00000012711
I
0.827
Aan_R000616
Calypte anna
Aan_R000616
I
0.827
Afo_R004626
Aptenodytes forsteri
Afo_R004626
I
0.827
Cmyd_10012109
Chelonia mydas
Cmyd_10012109
I
0.827
Gfo_R006733
Geospiza fortis
Gfo_R006733
I
0.827
Pvit_09536
Pogona vitticeps
Pvit_09536
I
0.827
im:7142702
Oryzias latipes
ENSORLG00000010488
I
0.825
ENSAMXG00000018130
Astyanax mexicanus
ENSAMXG00000018130
I
0.823
im:7142702
Danio rerio
ENSDARG00000067727
I
0.823
im:7142702
Gasterosteus aculeatus
ENSGACG00000005537
I
0.823
ENSPFOG00000003609
Poecilia formosa
ENSPFOG00000003609
I
0.823
ENSXMAG00000019910
Xiphophorus maculatus
ENSXMAG00000019910
I
0.823
ENSP00000349723
Macaca fascicularis
ENSP00000349723
I
0.823
BCL11B
Tursiops truncatus
ENSTTRG00000012140
I
0.822
ENSONIG00000001067
Oreochromis niloticus
ENSONIG00000001067
I
0.821
im:7142702
Takifugu rubripes
ENSTRUG00000018074
I
0.821
Sakowv30026316m.g
Saccoglossus kowalevskii
Sakowv30026316m.g
I
0.820
bcl11ba
Gasterosteus aculeatus
ENSGACG00000013118
I
0.819
ENSGMOG00000012414
Gadus morhua
ENSGMOG00000012414
I
0.819
ENSPFOG00000007224
Poecilia formosa
ENSPFOG00000007224
I
0.819
ENSXMAG00000020344
Xiphophorus maculatus
ENSXMAG00000020344
I
0.819
ENSLOCG00000008679
Lepisosteus oculatus
ENSLOCG00000008679
I
0.817
ENSONIG00000011060
Oreochromis niloticus
ENSONIG00000011060
I
0.817
bcl11ba
Oryzias latipes
ENSORLG00000010826
I
0.817
bcl11ba
Tetraodon nigroviridis
ENSTNIG00000008283
I
0.817
bcl11ba
Takifugu rubripes
ENSTRUG00000003531
I
0.817
ENSGMOG00000015842
Gadus morhua
ENSGMOG00000015842
I
0.816
bcl11ab
Gasterosteus aculeatus
ENSGACG00000019222
I
0.814
ENSLOCG00000016135
Lepisosteus oculatus
ENSLOCG00000016135
I
0.814
bcl11aa
Danio rerio
ENSDARG00000061352
I
0.811
bcl11ab
Danio rerio
ENSDARG00000063153
I
0.811
ENSOCUG00000024296
Oryctolagus cuniculus
ENSOCUG00000024296
I
0.811
ENSONIG00000018855
Oreochromis niloticus
ENSONIG00000018855
I
0.811
bcl11ab
Oryzias latipes
ENSORLG00000013169
I
0.811
ENSPFOG00000007302
Poecilia formosa
ENSPFOG00000007302
I
0.811
bcl11ab
Tetraodon nigroviridis
ENSTNIG00000012076
I
0.811
bcl11ab
Takifugu rubripes
ENSTRUG00000013751
I
0.811
im:7142702
Tetraodon nigroviridis
ENSTNIG00000009693
I
0.808
BCL11A
Anolis carolinensis
ENSACAG00000015159
I
0.806
ENSAMEG00000015813
Ailuropoda melanoleuca
ENSAMEG00000015813
I
0.806
ENSAPLG00000007735
Anas platyrhynchos
ENSAPLG00000007735
I
0.806
BCL11A
Callithrix jacchus
ENSCJAG00000009226
I
0.806
BCL11A
Cavia porcellus
ENSCPOG00000007587
I
0.806
BCL11A
Dasypus novemcinctus
ENSDNOG00000019842
I
0.806
Bcl11a
Dipodomys ordii
ENSDORG00000010064
I
0.806
BCL11A
Erinaceus europaeus
ENSEEUG00000010958
I
0.806
ENSFALG00000011123
Ficedula albicollis
ENSFALG00000011123
I
0.806
BCL11A
Felis catus
ENSFCAG00000027154
I
0.806
BCL11A
Homo sapiens
ENSG00000119866
D
0.806
ENSGALG00000007866
Gallus gallus
ENSGALG00000007866
I
0.806
BCL11A
Gorilla gorilla
ENSGGOG00000007337
I
0.806
ENSLACG00000003560
Latimeria chalumnae
ENSLACG00000003560
I
0.806
BCL11A
Loxodonta africana
ENSLAFG00000003101
I
0.806
ENSMEUG00000001829
Macropus eugenii
ENSMEUG00000001829
I
0.806
BCL11A
Meleagris gallopavo
ENSMGAG00000013042
I
0.806
BCL11A
Microcebus murinus
ENSMICG00000015052
I
0.806
ENSMMUG00000011303
Macaca mulatta
ENSMMUG00000011303
I
0.806
Bcl11a
Mus musculus
ENSMUSG00000000861
I
0.806
BCL11A
Ornithorhynchus anatinus
ENSOANG00000012402
I
0.806
BCL11A
Oryctolagus cuniculus
ENSOCUG00000023948
I
0.806
ENSPSIG00000013644
Pelodiscus sinensis
ENSPSIG00000013644
I
0.806
BCL11A
Pteropus vampyrus
ENSPVAG00000000042
I
0.806
Bcl11a
Rattus norvegicus
ENSRNOG00000007049
I
0.806
ENSSHAG00000015804
Sarcophilus harrisii
ENSSHAG00000015804
I
0.806
BCL11A
Sus scrofa
ENSSSCG00000008392
I
0.806
ENSSTOG00000004523
Ictidomys tridecemlineatus
ENSSTOG00000004523
I
0.806
BCL11A
Taeniopygia guttata
ENSTGUG00000006790
I
0.806
ENSTSYG00000009153
Tarsius syrichta
ENSTSYG00000009153
I
0.806
BCL11A
Tursiops truncatus
ENSTTRG00000006191
I
0.806
BCL11A
Vicugna pacos
ENSVPAG00000000491
I
0.806
Aan_R006276
Calypte anna
Aan_R006276
I
0.806
Afo_R011357
Aptenodytes forsteri
Afo_R011357
I
0.806
Alligator_sinensis_CCG008166.1
Alligator sinensis
Alligator_sinensis_CCG008166.1
I
0.806
Cmyd_10008592
Chelonia mydas
Cmyd_10008592
I
0.806
ENSBTAP00000023987-D2
Bos grunniens
ENSBTAP00000023987-D2
I
0.806
ENSP00000338774
Macaca fascicularis
ENSP00000338774
I
0.806
Gfo_R008167
Geospiza fortis
Gfo_R008167
I
0.806
Pvit_18645
Pogona vitticeps
Pvit_18645
I
0.806
bcl11a
Xenopus tropicalis
XB-GENE-486641
I
0.806
ENSAMXG00000004597
Astyanax mexicanus
ENSAMXG00000004597
I
0.804
ENSXMAG00000007242
Xiphophorus maculatus
ENSXMAG00000007242
I
0.802
SMAR003355
Strigamia maritima
SMAR003355
I
0.802
SPU_018909
Strongylocentrotus purpuratus
SPU_018909
I
0.801
bcl11aa
Gasterosteus aculeatus
ENSGACG00000013419
I
0.800
Ocbimv22018271m.g
Octopus bimaculoides
Ocbimv22018271m.g
I
0.800
ENSONIG00000002906
Oreochromis niloticus
ENSONIG00000002906
I
0.799
bcl11aa
Oryzias latipes
ENSORLG00000001704
I
0.799
ENSPFOG00000019062
Poecilia formosa
ENSPFOG00000019062
I
0.799
bcl11aa
Takifugu rubripes
ENSTRUG00000003815
I
0.799
ISCW016418
Ixodes scapularis
ISCW016418
I
0.790
PHUM606430
Pediculus humanus
PHUM606430
I
0.783
RPRC001562
Rhodnius prolixus
RPRC001562
I
0.778
LotgiG139415
Lottia gigantea
LotgiG139415
I
0.777
L798_02171
Zootermopsis nevadensis
L798_02171
I
0.773
HHAL008065-PA
Halyomorpha halys
HHAL008065-PA
I
0.772
ACYPI007319
Acyrthosiphon pisum
ACYPI007319
I
0.763
BGLB012676
Biomphalaria glabrata
BGLB012676
I
0.761
CapteG65449
Capitella teleta
CapteG65449
I
0.758
AMEC015245
Anopheles melas
AMEC015245
I
0.756