CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACYPI007319
(
Acyrthosiphon pisum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ACYPI007319
T079726_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BCL11B
M04453_2.00
Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX
0.763
0.858
BCL11B
M04454_2.00
Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC
SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX
0.763
0.858
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACYPI007319-PA
C2H2 ZF
565
586
ECEYCGKKFRFLSNLIVHRRTH
ACYPI007319-PA
C2H2 ZF
592
614
YKCSVCDHACTQSSKLKRHMKTH
ACYPI007319-PA
C2H2 ZF
970
992
DTCEYCGKVFKNCSNLTVHRRSH
ACYPI007319-PA
C2H2 ZF
998
1020
YKCELCSYACAQSSKLTRHMKTH
ACYPI007319-PA
C2H2 ZF
1028
1049
YRCRFCEMPFSVPSTLEKHMRK
Links
Other
C2H2 ZF
family TFs
Other
Acyrthosiphon pisum
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L798_02171
Zootermopsis nevadensis
L798_02171
I
0.797
PHUM606430
Pediculus humanus
PHUM606430
I
0.797
RPRC001562
Rhodnius prolixus
RPRC001562
I
0.796
HHAL008065-PA
Halyomorpha halys
HHAL008065-PA
I
0.786
SMAR003355
Strigamia maritima
SMAR003355
I
0.783
Ocbimv22018271m.g
Octopus bimaculoides
Ocbimv22018271m.g
I
0.779
ISCW016418
Ixodes scapularis
ISCW016418
I
0.776
LotgiG139415
Lottia gigantea
LotgiG139415
I
0.765
ENSACAG00000013085
Anolis carolinensis
ENSACAG00000013085
I
0.763
ENSAMXG00000015839
Astyanax mexicanus
ENSAMXG00000015839
I
0.763
ENSAPLG00000006283
Anas platyrhynchos
ENSAPLG00000006283
I
0.763
BCL11B
Bos taurus
ENSBTAG00000018019
I
0.763
BCL11B
Canis familiaris
ENSCAFG00000017809
I
0.763
BCL11B
Callithrix jacchus
ENSCJAG00000006713
I
0.763
ENSCPOG00000009946
Cavia porcellus
ENSCPOG00000009946
I
0.763
ENSCSAG00000010477
Chlorocebus sabaeus
ENSCSAG00000010477
I
0.763
BCL11B
Dasypus novemcinctus
ENSDNOG00000012677
I
0.763
BCL11B
Homo sapiens
ENSG00000127152
D
0.763
ENSGALG00000011127
Gallus gallus
ENSGALG00000011127
I
0.763
ENSGALG00000028278
Gallus gallus
ENSGALG00000028278
I
0.763
BCL11B
Gorilla gorilla
ENSGGOG00000001232
I
0.763
BCL11B
Loxodonta africana
ENSLAFG00000009254
I
0.763
BCL11B
Macaca mulatta
ENSMMUG00000003261
I
0.763
BCL11B
Monodelphis domestica
ENSMODG00000012964
I
0.763
Bcl11b
Mus musculus
ENSMUSG00000048251
I
0.763
ENSNLEG00000000711
Nomascus leucogenys
ENSNLEG00000000711
I
0.763
BCL11B
Ornithorhynchus anatinus
ENSOANG00000014770
I
0.763
BCL11B
Otolemur garnettii
ENSOGAG00000033204
I
0.763
im:7142702
Oryzias latipes
ENSORLG00000010488
I
0.763
ENSPANG00000004313
Papio anubis
ENSPANG00000004313
I
0.763
ENSPPYG00000006131
Pongo abelii
ENSPPYG00000006131
I
0.763
ENSPSIG00000013079
Pelodiscus sinensis
ENSPSIG00000013079
I
0.763
BCL11B
Pan troglodytes
ENSPTRG00000006707
I
0.763
BCL11B
Pteropus vampyrus
ENSPVAG00000015516
I
0.763
Bcl11b
Rattus norvegicus
ENSRNOG00000005776
I
0.763
ENSSHAG00000009291
Sarcophilus harrisii
ENSSHAG00000009291
I
0.763
BCL11B
Sus scrofa
ENSSSCG00000002507
I
0.763
ENSSTOG00000021531
Ictidomys tridecemlineatus
ENSSTOG00000021531
I
0.763
BCL11B
Taeniopygia guttata
ENSTGUG00000012711
I
0.763
Aan_R000616
Calypte anna
Aan_R000616
I
0.763
Afo_R004626
Aptenodytes forsteri
Afo_R004626
I
0.763
Cmyd_10012109
Chelonia mydas
Cmyd_10012109
I
0.763
Gfo_R006733
Geospiza fortis
Gfo_R006733
I
0.763
Pvit_09536
Pogona vitticeps
Pvit_09536
I
0.763
ENSAMXG00000018130
Astyanax mexicanus
ENSAMXG00000018130
I
0.761
im:7142702
Danio rerio
ENSDARG00000067727
I
0.761
im:7142702
Gasterosteus aculeatus
ENSGACG00000005537
I
0.761
ENSPFOG00000003609
Poecilia formosa
ENSPFOG00000003609
I
0.761
ENSXMAG00000019910
Xiphophorus maculatus
ENSXMAG00000019910
I
0.761
BGLB012676
Biomphalaria glabrata
BGLB012676
I
0.761
Sakowv30026316m.g
Saccoglossus kowalevskii
Sakowv30026316m.g
I
0.760
ENSP00000349723
Macaca fascicularis
ENSP00000349723
I
0.759
ENSONIG00000001067
Oreochromis niloticus
ENSONIG00000001067
I
0.758
im:7142702
Takifugu rubripes
ENSTRUG00000018074
I
0.758
BCL11B
Tursiops truncatus
ENSTTRG00000012140
I
0.757